Carg16995 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16995
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box/LRR-repeat protein 3
Location	Carg_Chr11: 6956584 .. 6960121 (-)
RNA-Seq Expression	Carg16995
Synteny	Carg16995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGAGAGAGAGAGAGGAGGAAGAACAACAGTAGAACACCATGATGGATTGGGTCGGCAATTCCGGTTCGGGTCAGATCCAAACGCTCTCCAAATCCGCCCACCATCCTCTCCTCCGTCTCCGCCTCCTCTTCCTCTTCGTCCCAACTTAGACTCCGCTTTCTCAATTCTTCAAATCTCTGTTGTTTTCACTTTGTTTCTTCAAAATTCGCTAATGCCTTCACCATTTCCACTTCTCCTCAACTTCCCCGATGAAATCCTCATCCGTCTCCGCCGATATCTCACCGACGACTCCGATTCCAGATCCTGGCGGCTCGTCTGCAAGGACTTCTACCGCGTCGATTTAATCTCCCGCACAACTCTGCGAGTCCGTCGAATTGAGTTTCTCTCCAGTTTAATCGCCAAGTTTGAAGCTATCGATGAGTTGGATCTGTCGATTTGCCCTCGGATTAACGATGGGACGGTCTCGATCTTTCTGGGTCTTGGGTTTTCAAGGCTGAGGAGTTTGATTCTAAGCCGATCGTCGGGGTTGAGCTACATGGGGTTGGAGAGGGTGATGCGGGCCTGCACGGGGCTGGAAATGGTCGACATGTCGTACAGTTGGGGGTTTGGGGATAGGGAAGCGGCGGCAGTGTCCAATTGTGCGGAGTTGAAGGAGGTGAGGCTGGATAAGTGTTTGGGGGTTACGGATGTGGGTTTGGCGAGGATTGTTGTTGGCTGTGGGAGGTTAGAGAGGCTTAGTTTGAAGTGGTGCTTGCAGGTTTCTGATCTTGGTGTTGAGCTTTTGTGTAAGAAGTGCTTCGATTTGCGGGTTCTTGATTTGTCTTATCTCAAGGTTTGCTCCCCTCGTCCCTGTTCTTACGTTTGTTTGTTTTCCTATAGTTTCTGTAATTTGGAAGCTCTGTTTAATGACAAATTGAGGAAAATAAACTTAATTAGGTAGGTTTATTGACTTTTATAGTAAAATTTCACTGGATTGGATGATAGACTTAAGACAAATGTCACAATTTGTATCTTAAACTAGAATAAGTAATTCAAAATTTACCAATTGATAGGTTTTTGTATGAAGAATTGTCAAAAATGGTGTATAAAGTTTATGAGATCTTAGAAGAAAGATACTGAAGTTGATTTTTGTTGACATTTACAAATTTTGAGAACATCAATTCAATGTAGTTTTATTGTGCATAAGGTTTGAGTGTTTTTTTTTTTTTGGTTATTTTTGTTAAAATTAGCAAATGAATGTTACAGAATTTGAACACATGCTAAAAATAGCAACTCTTAACTAAGCAATCAGAGTAAAATTTGAAAATTTTTTATATTTTATTTGACAAATTTTGATATTCTCTTTGAATTTTTATTTTCAAACGTTTTTAAGAACAGCTCCCAAACAATTCCAAACATATTCTTTTGGCAATTCTGGTTAAAATGTGTGAACTGAACTTCATGTTGGGTTAACAACAGGTGACAAATGAATCACTACGTGCAGTAGCTTCTTTGCCAAAGCTTGAGGTCTTAATTATGGTGGGCTGTCTTTCAGTTGACGATCTTGGTTTGCAATATCTTGAACACGGGTGCCCATCTCTAAAGGTTCTTATGATCAAGTGCAGTATGATTCTTTTTGCTTAATACATTACATAAATTCGAGCAAACTGTCAAGTCAGTCGGCTTGCTTAGTTATATGTTGGTATCACGATCTAATTTGTACGAGCTTGCACGTTTTCAAATGGATTGTAGGAACTTGATATTTCAAGATGTGATGGCATTAGACCATATGGTTTAACATCTGTTTTAAGAGGTCATGATGGTCTTGAACAACTTGATGCAAGCTACTGCTTCTCTGTAAGATGATGCTGCATTTTTTCGATTTTGAGTTTGCCTTCTTTTTCTGTTATGAAGCTTCCATCTTTGGCTTTTGCTTCTAGGAGCTCTCCACAGATTCTCTTTACTGGCTGAAGAACCTGAAGTGTCTAAAAGCAATTAGGCTTGATGGTACTCAACTCTCGAGTGCGTTTTTCGATGTAATCAGCGTCCACGGCAAGTATTTGGTGGAACTTGGGTTGAGCAAATGCAATGGAGTAACTGATGCAAACATAATTCAGCTGATCACTCGCTGTATTGGCTTGAAAGTTCTTAATTTAACATGTTGCCACTCCATCACCGATGCGGCGATATCTTCAATGGCTGGCTCGTGCCAGAAACTCATGTCGCTGAAGTTAGAATCGTGCAACATGATCACCGAAAGAAGTCTTTATCGGCTTGGGTTATATTGCTCATTACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGTACTTTCATTATAACAAGTAATAACATACAACCATTTGAGTGAATCATTAAGCTAACTTGATTGTGTCCTCCCTTGCAGGACTTGAATGCTTATCAAAATGTTCACAATTGCTAAGCTTGAAACTAGGATTGTGCACAAACATAACAGACACAGGGTTGATCAAGATTGCTCGCAACTGCAAAAGGATTTATGAACTCGATTTGTACCGGTAATGTGAGAGAGTTCAGAAATTTATTTCATCTTTTTGAGTAACTACTCAAAAGAGGAGAATGTCATTCTATTTAACTCTTGAATTGCAGTTGTCTGGGAATTGGGGATGCCGGATTAGAAGCTCTATCAACTGGGTGCAAGAGATTGACGAAACTAAACTTGTCATACTGTAATAAGGTTACGGATAGAGGAATCGAGTGCGTCGGCCAGCTCGAAGAACTCTGCAGCCTAGAAATACGTGGGCTTCAGAATGTCACAAGCGTAGGTTTGACAGCAGTGGCATTTGGTTGTAAAAGATTAGTAGATTTGGACATGAAACAATGCCAGAATGTGGATGACTCTGGCTTTTGGGCACTTGGCTCCTATGCTCGGAATTTGCGTCAGGTATATGGATTCATTACGTTTGTTGCTATGTCATTTGTATTTGGTTCTTGGAATGAGATGAAACAGCTGATTGTTGTTTGGATTGTGGCAGTTAAATGTGGGGTGTTGTGGTGTATCAGACGTGGGATTATGCATGATGATGGGGAACCTTTCATGCCTTCAGGATGCCAAGCTGGTGACCCTTAATAAAGTTTCAGTGCGAGGGTTCGAGCTAGCACTCAGGGCCTGCTGCCTCAGGGTCAAGAAAGTCAAGCTGCACGCATCTCTCAGGTTTATGCTCTCCTCAGAGATACTTGAAATTTTAAATGCTTGGGGTTGCAAGATTAGATGGGATTAGAGCGATTTGAGAAGGAAGCAGTTTCATGCATGTTTGTTTGTCATGTTCAATGCCAATGTGTGCATATCAAATTCAATGGCAGAATTGGCCTACTGGGTAGCTTCTTAATACCATTGCTTGCTTTATATTGAACTATTTGTTCCCATCAATGCTGTGGGATTGAAATAATGATGAGTCTGAAAGCATTTTATGTTAAACTTTGATTCTAAGACTGTCTTCTTCAACGCTTACATGAGCGGTGGTACAATTTAGAGGGTGGCTCGAGTGGTATAACAATT

mRNA sequence

AGAGAGAGAGAGAGAGAGAGAGGAGGAAGAACAACAGTAGAACACCATGATGGATTGGGTCGGCAATTCCGGTTCGGGTCAGATCCAAACGCTCTCCAAATCCGCCCACCATCCTCTCCTCCGTCTCCGCCTCCTCTTCCTCTTCGTCCCAACTTAGACTCCGCTTTCTCAATTCTTCAAATCTCTGTTGTTTTCACTTTGTTTCTTCAAAATTCGCTAATGCCTTCACCATTTCCACTTCTCCTCAACTTCCCCGATGAAATCCTCATCCGTCTCCGCCGATATCTCACCGACGACTCCGATTCCAGATCCTGGCGGCTCGTCTGCAAGGACTTCTACCGCGTCGATTTAATCTCCCGCACAACTCTGCGAGTCCGTCGAATTGAGTTTCTCTCCAGTTTAATCGCCAAGTTTGAAGCTATCGATGAGTTGGATCTGTCGATTTGCCCTCGGATTAACGATGGGACGGTCTCGATCTTTCTGGGTCTTGGGTTTTCAAGGCTGAGGAGTTTGATTCTAAGCCGATCGTCGGGGTTGAGCTACATGGGGTTGGAGAGGGTGATGCGGGCCTGCACGGGGCTGGAAATGGTCGACATGTCGTACAGTTGGGGGTTTGGGGATAGGGAAGCGGCGGCAGTGTCCAATTGTGCGGAGTTGAAGGAGGTGAGGCTGGATAAGTGTTTGGGGGTTACGGATGTGGGTTTGGCGAGGATTGTTGTTGGCTGTGGGAGGTTAGAGAGGCTTAGTTTGAAGTGGTGCTTGCAGGTTTCTGATCTTGGTGTTGAGCTTTTGTGTAAGAAGTGCTTCGATTTGCGGGTTCTTGATTTGTCTTATCTCAAGGTGACAAATGAATCACTACGTGCAGTAGCTTCTTTGCCAAAGCTTGAGGTCTTAATTATGGTGGGCTGTCTTTCAGTTGACGATCTTGGTTTGCAATATCTTGAACACGGGTGCCCATCTCTAAAGGAACTTGATATTTCAAGATGTGATGGCATTAGACCATATGGTTTAACATCTGTTTTAAGAGGTCATGATGGTCTTGAACAACTTGATGCAAGCTACTGCTTCTCTGAGCTCTCCACAGATTCTCTTTACTGGCTGAAGAACCTGAAGTGTCTAAAAGCAATTAGGCTTGATGGTACTCAACTCTCGAGTGCGTTTTTCGATGTAATCAGCGTCCACGGCAAGTATTTGGTGGAACTTGGGTTGAGCAAATGCAATGGAGTAACTGATGCAAACATAATTCAGCTGATCACTCGCTGTATTGGCTTGAAAGTTCTTAATTTAACATGTTGCCACTCCATCACCGATGCGGCGATATCTTCAATGGCTGGCTCGTGCCAGAAACTCATGTCGCTGAAGTTAGAATCGTGCAACATGATCACCGAAAGAAGTCTTTATCGGCTTGGGTTATATTGCTCATTACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGACTTGAATGCTTATCAAAATGTTCACAATTGCTAAGCTTGAAACTAGGATTGTGCACAAACATAACAGACACAGGGTTGATCAAGATTGCTCGCAACTGCAAAAGGATTTATGAACTCGATTTGTACCGGTAATTTGTCTGGGAATTGGGGATGCCGGATTAGAAGCTCTATCAACTGGGTGCAAGAGATTGACGAAACTAAACTTGTCATACTGTAATAAGGTTACGGATAGAGGAATCGAGTGCGTCGGCCAGCTCGAAGAACTCTGCAGCCTAGAAATACGTGGGCTTCAGAATGTCACAAGCGTAGGTTTGACAGCAGTGGCATTTGGTTGTAAAAGATTAGTAGATTTGGACATGAAACAATGCCAGAATGTGGATGACTCTGGCTTTTGGGCACTTGGCTCCTATGCTCGGAATTTGCGTCAGTTAAATGTGGGGTGTTGTGGTGTATCAGACGTGGGATTATGCATGATGATGGGGAACCTTTCATGCCTTCAGGATGCCAAGCTGGTGACCCTTAATAAAGTTTCAGTGCGAGGGTTCGAGCTAGCACTCAGGGCCTGCTGCCTCAGGGTCAAGAAAGTCAAGCTGCACGCATCTCTCAGGTTTATGCTCTCCTCAGAGATACTTGAAATTTTAAATGCTTGGGGTTGCAAGATTAGATGGGATTAGAGCGATTTGAGAAGGAAGCAGTTTCATGCATGTTTGTTTGTCATGTTCAATGCCAATGTGTGCATATCAAATTCAATGGCAGAATTGGCCTACTGGGTAGCTTCTTAATACCATTGCTTGCTTTATATTGAACTATTTGTTCCCATCAATGCTGTGGGATTGAAATAATGATGAGTCTGAAAGCATTTTATGTTAAACTTTGATTCTAAGACTGTCTTCTTCAACGCTTACATGAGCGGTGGTACAATTTAGAGGGTGGCTCGAGTGGTATAACAATT

Coding sequence (CDS)

AGAGAGAGAGAGAGAGAGAGAGGAGGAAGAACAACAGTAGAACACCATGATGGATTGGGTCGGCAATTCCGGTTCGGGTCAGATCCAAACGCTCTCCAAATCCGCCCACCATCCTCTCCTCCGTCTCCGCCTCCTCTTCCTCTTCGTCCCAACTTAGACTCCGCTTTCTCAATTCTTCAAATCTCTGTTGTTTTCACTTTGTTTCTTCAAAATTCGCTAATGCCTTCACCATTTCCACTTCTCCTCAACTTCCCCGATGAAATCCTCATCCGTCTCCGCCGATATCTCACCGACGACTCCGATTCCAGATCCTGGCGGCTCGTCTGCAAGGACTTCTACCGCGTCGATTTAATCTCCCGCACAACTCTGCGAGTCCGTCGAATTGAGTTTCTCTCCAGTTTAATCGCCAAGTTTGAAGCTATCGATGAGTTGGATCTGTCGATTTGCCCTCGGATTAACGATGGGACGGTCTCGATCTTTCTGGGTCTTGGGTTTTCAAGGCTGAGGAGTTTGATTCTAAGCCGATCGTCGGGGTTGAGCTACATGGGGTTGGAGAGGGTGATGCGGGCCTGCACGGGGCTGGAAATGGTCGACATGTCGTACAGTTGGGGGTTTGGGGATAGGGAAGCGGCGGCAGTGTCCAATTGTGCGGAGTTGAAGGAGGTGAGGCTGGATAAGTGTTTGGGGGTTACGGATGTGGGTTTGGCGAGGATTGTTGTTGGCTGTGGGAGGTTAGAGAGGCTTAGTTTGAAGTGGTGCTTGCAGGTTTCTGATCTTGGTGTTGAGCTTTTGTGTAAGAAGTGCTTCGATTTGCGGGTTCTTGATTTGTCTTATCTCAAGGTGACAAATGAATCACTACGTGCAGTAGCTTCTTTGCCAAAGCTTGAGGTCTTAATTATGGTGGGCTGTCTTTCAGTTGACGATCTTGGTTTGCAATATCTTGAACACGGGTGCCCATCTCTAAAGGAACTTGATATTTCAAGATGTGATGGCATTAGACCATATGGTTTAACATCTGTTTTAAGAGGTCATGATGGTCTTGAACAACTTGATGCAAGCTACTGCTTCTCTGAGCTCTCCACAGATTCTCTTTACTGGCTGAAGAACCTGAAGTGTCTAAAAGCAATTAGGCTTGATGGTACTCAACTCTCGAGTGCGTTTTTCGATGTAATCAGCGTCCACGGCAAGTATTTGGTGGAACTTGGGTTGAGCAAATGCAATGGAGTAACTGATGCAAACATAATTCAGCTGATCACTCGCTGTATTGGCTTGAAAGTTCTTAATTTAACATGTTGCCACTCCATCACCGATGCGGCGATATCTTCAATGGCTGGCTCGTGCCAGAAACTCATGTCGCTGAAGTTAGAATCGTGCAACATGATCACCGAAAGAAGTCTTTATCGGCTTGGGTTATATTGCTCATTACTAGAGGAGCTTGATCTTACTGATTGTTGTGGTGTGAATGACAAGGGACTTGAATGCTTATCAAAATGTTCACAATTGCTAAGCTTGAAACTAGGATTGTGCACAAACATAACAGACACAGGGTTGATCAAGATTGCTCGCAACTGCAAAAGGATTTATGAACTCGATTTGTACCGGTAA

Protein sequence

RERERERGGRTTVEHHDGLGRQFRFGSDPNALQIRPPSSPPSPPPLPLRPNLDSAFSILQISVVFTLFLQNSLMPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSLIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR

Homology

[Close]

BLAST of Carg16995 vs. NCBI nr
Match: KAG7022363.1 (F-box/LRR-repeat protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1060.8 bits (2742), Expect = 3.8e-306
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0


Query: 1   RERERERGGRTTVEHHDGLGRQFRFGSDPNALQIRPPSSPPSPPPLPLRPNLDSAFSILQ 60
           RERERERGGRTTVEHHDGLGRQFRFGSDPNALQIRPPSSPPSPPPLPLRPNLDSAFSILQ
Sbjct: 1   RERERERGGRTTVEHHDGLGRQFRFGSDPNALQIRPPSSPPSPPPLPLRPNLDSAFSILQ 60

Query: 61  ISVVFTLFLQNSLMPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISR 120
           ISVVFTLFLQNSLMPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISR
Sbjct: 61  ISVVFTLFLQNSLMPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISR 120

Query: 121 TTLRVRRIEFLSSLIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLS 180
           TTLRVRRIEFLSSLIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLS
Sbjct: 121 TTLRVRRIEFLSSLIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLS 180

Query: 181 YMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVV 240
           YMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVV
Sbjct: 181 YMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVV 240

Query: 241 GCGRLERLSLKWCLQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIM 300
           GCGRLERLSLKWCLQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIM
Sbjct: 241 GCGRLERLSLKWCLQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIM 300

Query: 301 VGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELS 360
           VGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELS
Sbjct: 301 VGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELS 360

Query: 361 TDSLYWLKNLKCLKAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITR 420
           TDSLYWLKNLKCLKAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITR
Sbjct: 361 TDSLYWLKNLKCLKAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITR 420

Query: 421 CIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELD 480
           CIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELD
Sbjct: 421 CIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELD 480

Query: 481 LTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           LTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 481 LTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 534

[Close]

BLAST of Carg16995 vs. NCBI nr
Match: KAG6588569.1 (F-box/LRR-repeat protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 921.4 bits (2380), Expect = 3.6e-264
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG
Sbjct: 61  LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY
Sbjct: 181 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 461

[Close]

BLAST of Carg16995 vs. NCBI nr
Match: XP_022931715.1 (F-box/LRR-repeat protein 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 912.9 bits (2358), Expect = 1.3e-261
Identity = 457/461 (99.13%), Postives = 459/461 (99.57%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLER+MRACTG
Sbjct: 61  LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERLMRACTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY
Sbjct: 181 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWL+NLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLRNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAISSMAG CQKLMSLKLESCNMITERSL RLGLYCSLLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDAAISSMAGLCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 461

[Close]

BLAST of Carg16995 vs. NCBI nr
Match: XP_023530541.1 (F-box/LRR-repeat protein 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 903.3 bits (2333), Expect = 1.0e-258
Identity = 451/461 (97.83%), Postives = 457/461 (99.13%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LIAKFEAID+LDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMR CTG
Sbjct: 61  LIAKFEAIDDLDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRVCTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGV+DVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVSDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVD++GLQY
Sbjct: 181 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDEVGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGI PYGLTSV+RGHDGLEQLDASYCFSELSTDSLYWLKNLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAISSMAGSCQKLMSLKLESCNMI+ERSL RLGLYCSLLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDAAISSMAGSCQKLMSLKLESCNMISERSLDRLGLYCSLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIA NCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIALNCKRIYELDLYR 461

[Close]

BLAST of Carg16995 vs. NCBI nr
Match: XP_023530543.1 (F-box/LRR-repeat protein 3 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 903.3 bits (2333), Expect = 1.0e-258
Identity = 451/461 (97.83%), Postives = 457/461 (99.13%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LIAKFEAID+LDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMR CTG
Sbjct: 61  LIAKFEAIDDLDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRVCTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGV+DVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVSDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVD++GLQY
Sbjct: 181 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDEVGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGI PYGLTSV+RGHDGLEQLDASYCFSELSTDSLYWLKNLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAISSMAGSCQKLMSLKLESCNMI+ERSL RLGLYCSLLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDAAISSMAGSCQKLMSLKLESCNMISERSLDRLGLYCSLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIA NCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIALNCKRIYELDLYR 461

[Close]

BLAST of Carg16995 vs. ExPASy Swiss-Prot
Match: Q8RWU5 (F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana OX=3702 GN=FBL3 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.8e-93
Identity = 188/458 (41.05%), Postives = 272/458 (59.39%), Query Frame = 0


Query: 77  PFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSLIA 136
           PF LL    + + I L     + SD +S+ L CK FY+++   R +L+  R ++L  ++ 
Sbjct: 12  PFDLLSE--ELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILT 71

Query: 137 KFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEM 196
           ++    +LDL+ CPR+ D  +S+   L    LRSL LSRS   S  GL R+   C  L  
Sbjct: 72  RYRNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVE 131

Query: 197 VDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQV 256
           +D+S +    D +AA V+    L+ ++L +C  +TD+G+  I VGC +L  +SLKWC+ V
Sbjct: 132 IDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGV 191

Query: 257 SDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEH 316
            DLGV LL  KC D+R LDLSYL +T + L  +  L  LE L++ GC  VDD  L+ L H
Sbjct: 192 GDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRH 251

Query: 317 GCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAI 376
            C SLK+LD S C  +   GLTS+L G   L++LD S+C S +S D    LK +  L++I
Sbjct: 252 DCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSI 311

Query: 377 RLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSIT 436
           RLDG  ++      I      L E+ LSKC  VTD  +  L+ +   L+ L++TCC  ++
Sbjct: 312 RLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLS 371

Query: 437 DAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLS 496
             +I+ +A SC  L+SLK+ESC++++  + + +G  C LLEELDLTD   ++D+GL+ +S
Sbjct: 372 RVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTD-NEIDDEGLKSIS 431

Query: 497 KCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
            C  L SLKLG+C NITD GL  I   C  + ELDLYR
Sbjct: 432 SCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYR 466

[Close]

BLAST of Carg16995 vs. ExPASy Swiss-Prot
Match: Q9C5D2 (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-36
Identity = 130/498 (26.10%), Postives = 223/498 (44.78%), Query Frame = 0


Query: 85  PDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRI----EFLSSLIAKFEA 144
           P+E+++ + R L    +  +  LVCK +  ++  SRTTLR+       +F+S L  +F  
Sbjct: 12  PEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFLY 71

Query: 145 IDELDL---------SICP-------------------RINDGTVS-------------- 204
           I  + +         S+ P                   ++ D T S              
Sbjct: 72  ITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTG 131

Query: 205 -IFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSN-C 264
              L  GF R+ +L L     +S +GL  + + CT L+ +D+   +  GD+  AAV   C
Sbjct: 132 LTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAVGKFC 191

Query: 265 AELKEVRLDKCLGVTDVGLARIVVGCGR-LERLSLKWCLQVSDLGVELLCKKCFDLRVLD 324
            +L+E+ L  C G+TDVG+  +VVGC + L+ + +    +++DL +E +   C  L VL 
Sbjct: 192 KQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLY 251

Query: 325 LSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPY 384
           L    + ++ L AVA        + + C+SV D+    +   C SL+ L +         
Sbjct: 252 LDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDK 311

Query: 385 GLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLDGT-QLSSAFFDVISVH 444
           G+ ++ +G   L+ L  S C+              K L+ + ++G   + +   + I   
Sbjct: 312 GMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKS 371

Query: 445 GKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLK 504
              L EL L  C  + ++ + ++   C  L++L+L  C  I D A+ S+A  C+ L  L 
Sbjct: 372 CPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLH 431

Query: 505 LESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITD 533
           +  C  I  + +  +G +C  L EL L  C  V +K L  + K   L  L +  C  I+D
Sbjct: 432 IRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISD 491

[Close]

BLAST of Carg16995 vs. ExPASy Swiss-Prot
Match: Q708Y0 (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.7e-30
Identity = 101/381 (26.51%), Postives = 180/381 (47.24%), Query Frame = 0


Query: 164 GFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAELKEV 223
           G   LR + L     +S +GL  + R+C  +E +D+S   G  D    A++ NC  L ++
Sbjct: 165 GCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDL 224

Query: 224 RLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVE-LLCKKCFDLRVLDLSYLKV 283
            +D C GV + GL  I   C  L  +S++ C ++ D GV  LL +    L  + L  L V
Sbjct: 225 TIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNV 284

Query: 284 TNESLRAVASL-PKLEVLIMVGCLSVDDLGLQYLEH--GCPSLKELDISRCDGIRPYGLT 343
           +  SL  +      +  L++ G   V++ G   + +  G   LK L +  C G+   GL 
Sbjct: 285 SGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLE 344

Query: 344 SVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLDGTQLSSAF--FDVISVHGK 403
           +V  G   L+ +  + C        +   K+   L++++L+     + F     +   G 
Sbjct: 345 AVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGS 404

Query: 404 YLVELGLSKCNGVTDANIIQLI--TRCIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLK 463
            L    L+ C G++D N    +    C  L+ L++ CC    DA+++ +   C +L  ++
Sbjct: 405 KLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVE 464

Query: 464 LESCNMITERSLYRLGLYCSL-LEELDLTDCCGVNDKGLECLSKC--SQLLSLKLGLCTN 523
           L   N +T+  +  L    ++ L +++L++C  V+D  +  +S C    L SL L  C N
Sbjct: 465 LCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKN 524

Query: 524 ITDTGLIKIARNCKRIYELDL 533
           IT+  L+ +A+NC  + +LD+
Sbjct: 525 ITNASLVAVAKNCYSVNDLDI 545

[Close]

BLAST of Carg16995 vs. ExPASy Swiss-Prot
Match: Q9CZV8 (F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3)

HSP 1 Score: 131.3 bits (329), Expect = 3.2e-29
Identity = 97/339 (28.61%), Postives = 161/339 (47.49%), Query Frame = 0


Query: 207 DREAAAVSNCAE-----LKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGV 266
           D E   V N ++     L+++ L  CLGV D  L      C  +E LSL  C + +D   
Sbjct: 76  DIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATC 135

Query: 267 ELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEHGCPSL 326
             L K C  LR LDL+                         C S+ ++ L+ L  GCP L
Sbjct: 136 TSLSKFCSKLRHLDLA------------------------SCTSITNMSLKALSEGCPLL 195

Query: 327 KELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLD-- 386
           ++L+IS CD +   G+ +++RG  GL+ L    C ++L  ++L ++    C + + L+  
Sbjct: 196 EQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC-TQLEDEALKYI-GAHCPELVTLNLQ 255

Query: 387 -GTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDA 446
              Q++      I      L  L  S C+ +TDA +  L   C  L++L +  C  +TD 
Sbjct: 256 TCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDV 315

Query: 447 AISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLSK- 506
             +++A +C +L  + LE C  IT+ +L +L ++C  L+ L L+ C  + D G+  L   
Sbjct: 316 GFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG 375

Query: 507 -CS--QLLSLKLGLCTNITDTGLIKIARNCKRIYELDLY 534
            C+  QL  ++L  C  ITD  L  + ++C  +  ++LY
Sbjct: 376 ACAHDQLEVIELDNCPLITDASLEHL-KSCHSLERIELY 387

[Close]

BLAST of Carg16995 vs. ExPASy Swiss-Prot
Match: Q58DG6 (F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 2.0e-28
Identity = 88/300 (29.33%), Postives = 157/300 (52.33%), Query Frame = 0


Query: 243 GRLERLSLKWCLQVSDLGVELLCKKCFDLRVLDLS-YLKVTNESLRAVASL-PKLEVLIM 302
           G L +LSL+ CL V D  +    + C ++ VL+L+   K T+ +  +++    KL  L +
Sbjct: 91  GFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDL 150

Query: 303 VGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELS 362
             C S+ ++ L+ L  GCP L++L+IS CD +   G+ +++RG  GL+ L    C ++L 
Sbjct: 151 ASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC-TQLE 210

Query: 363 TDSLYWLKNLKCLKAIRLD---GTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQL 422
            ++L ++    C + + L+     Q++      I      L  L  S C+ +TDA +  L
Sbjct: 211 DEALKYI-GAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNAL 270

Query: 423 ITRCIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLE 482
              C  L++L +  C  +TD   +++A +C +L  + LE C  IT+ +L +L ++C  L+
Sbjct: 271 GQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQ 330

Query: 483 ELDLTDCCGVNDKGLECLSK--CS--QLLSLKLGLCTNITDTGLIKIARNCKRIYELDLY 534
            L L+ C  + D G+  L    C+  QL  ++L  C  ITD  L  + ++C  +  ++LY
Sbjct: 331 VLSLSHCELITDDGIRHLGNGACAHDQLEVIELDNCPLITDASLEHL-KSCHSLERIELY 387

[Close]

BLAST of Carg16995 vs. ExPASy TrEMBL
Match: A0A6J1F090 (F-box/LRR-repeat protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437870 PE=4 SV=1)

HSP 1 Score: 912.9 bits (2358), Expect = 6.2e-262
Identity = 457/461 (99.13%), Postives = 459/461 (99.57%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLER+MRACTG
Sbjct: 61  LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERLMRACTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY
Sbjct: 181 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWL+NLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLRNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAISSMAG CQKLMSLKLESCNMITERSL RLGLYCSLLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDAAISSMAGLCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 461

[Close]

BLAST of Carg16995 vs. ExPASy TrEMBL
Match: A0A6J1EUF5 (F-box/LRR-repeat protein 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437870 PE=4 SV=1)

HSP 1 Score: 895.6 bits (2313), Expect = 1.0e-256
Identity = 452/461 (98.05%), Postives = 454/461 (98.48%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLER+MRACTG
Sbjct: 61  LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERLMRACTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY
Sbjct: 181 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWL+NLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLRNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAISSMAG CQKLMSLKLESCNMITERSL RLGLYCSLLEELDLTDCC     GLE
Sbjct: 361 SITDAAISSMAGLCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCC-----GLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 456

[Close]

BLAST of Carg16995 vs. ExPASy TrEMBL
Match: A0A6J1I0Y8 (F-box/LRR-repeat protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468439 PE=4 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 2.8e-254
Identity = 444/461 (96.31%), Postives = 451/461 (97.83%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MP+PFPLLLNFP EILIRLR+YLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPTPFPLLLNFPHEILIRLRQYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
            IAKFEAIDELDLSICPRINDGTVSIFLG+GFSRLRSLILSRSSGLSYMGLERVMRACTG
Sbjct: 61  SIAKFEAIDELDLSICPRINDGTVSIFLGIGFSRLRSLILSRSSGLSYMGLERVMRACTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKK FDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDD+GLQY
Sbjct: 181 LQVSDLGVELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGI PYGLTSV+RGHDGLEQLDASYCFSEL  DSL+WLKNLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFF+VISVH KYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITD AISSMA SCQKLMSLKLESCNMITERSL RLGLYCSLLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDVAISSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 461

[Close]

BLAST of Carg16995 vs. ExPASy TrEMBL
Match: A0A6J1HXT4 (F-box/LRR-repeat protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468439 PE=4 SV=1)

HSP 1 Score: 870.2 bits (2247), Expect = 4.6e-249
Identity = 439/461 (95.23%), Postives = 446/461 (96.75%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MP+PFPLLLNFP EILIRLR+YLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS
Sbjct: 1   MPTPFPLLLNFPHEILIRLRQYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
            IAKFEAIDELDLSICPRINDGTVSIFLG+GFSRLRSLILSRSSGLSYMGLERVMRACTG
Sbjct: 61  SIAKFEAIDELDLSICPRINDGTVSIFLGIGFSRLRSLILSRSSGLSYMGLERVMRACTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC
Sbjct: 121 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLGVELLCKK FDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDD+GLQY
Sbjct: 181 LQVSDLGVELLCKKSFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDVGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCPSLKELDISRCDGI PYGLTSV+RGHDGLEQLDASYCFSEL  DSL+WLKNLKCL
Sbjct: 241 LEHGCPSLKELDISRCDGITPYGLTSVIRGHDGLEQLDASYCFSELCADSLFWLKNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSSAFF+VISVH KYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSAFFNVISVHSKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITD AISSMA SCQKLMSLKLESCNMITERSL RLGLYCSLLEELDLTDCC     GLE
Sbjct: 361 SITDVAISSMASSCQKLMSLKLESCNMITERSLDRLGLYCSLLEELDLTDCC-----GLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR
Sbjct: 421 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 456

[Close]

BLAST of Carg16995 vs. ExPASy TrEMBL
Match: A0A1S3BQK8 (F-box/LRR-repeat protein 3 OS=Cucumis melo OX=3656 GN=LOC103492139 PE=4 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 2.4e-221
Identity = 392/461 (85.03%), Postives = 414/461 (89.80%), Query Frame = 0


Query: 74  MPSPFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSS 133
           MPSPFPL LNFPDEILIR+R+ LT  SDS+SWRLVCKDF+RVDLISR TLRVRRIEFL S
Sbjct: 1   MPSPFPLFLNFPDEILIRVRQNLTHHSDSKSWRLVCKDFHRVDLISRKTLRVRRIEFLLS 60

Query: 134 LIAKFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTG 193
           LI KFE IDELDLSIC RINDGTVSIFLG   S LR LIL RS+GLSYMGLE+V   CTG
Sbjct: 61  LITKFENIDELDLSICSRINDGTVSIFLGFASSSLRRLILRRSAGLSYMGLEKVTSRCTG 120

Query: 194 LEMVDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWC 253
           LEMVDMSYSW FGDREAAAVS C  LKEVRLDKCLGVTDVGLARIVVGCGRLE+LSLKWC
Sbjct: 121 LEMVDMSYSWRFGDREAAAVSICEGLKEVRLDKCLGVTDVGLARIVVGCGRLEKLSLKWC 180

Query: 254 LQVSDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQY 313
           LQVSDLG+ELLCKKC +L+ LDLSYLKVTNESLR+++SLPKLE L+M GCLSVDD GLQY
Sbjct: 181 LQVSDLGLELLCKKCLNLKFLDLSYLKVTNESLRSISSLPKLETLVMAGCLSVDDAGLQY 240

Query: 314 LEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCL 373
           LEHGCP LKELDISRCD I  YGLTS+LRGHDGLEQLDASYCFSELSTDS+Y LKNLKCL
Sbjct: 241 LEHGCPFLKELDISRCDAISSYGLTSILRGHDGLEQLDASYCFSELSTDSIYRLKNLKCL 300

Query: 374 KAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCH 433
           KAIRLDGTQLSS FF+VIS H +YLVELGLSKC GVTDANIIQLI+RCI LKVLNLTCCH
Sbjct: 301 KAIRLDGTQLSSTFFNVISDHCEYLVELGLSKCLGVTDANIIQLISRCISLKVLNLTCCH 360

Query: 434 SITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLE 493
           SITDAAIS  A SCQKLMSLKLESCNMITERSL +L L C LLEELDLTDCCGVNDKGLE
Sbjct: 361 SITDAAISKTATSCQKLMSLKLESCNMITERSLDQLALNCPLLEELDLTDCCGVNDKGLE 420

Query: 494 CLSKCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
           CLS+CSQLLSLKLGLCTNITD GLIKI  NCKRI+ELDLYR
Sbjct: 421 CLSRCSQLLSLKLGLCTNITDKGLIKIGLNCKRIHELDLYR 461

[Close]

BLAST of Carg16995 vs. TAIR 10
Match: AT5G27920.1 (F-box family protein )

HSP 1 Score: 469.9 bits (1208), Expect = 2.7e-132
Identity = 231/452 (51.11%), Postives = 326/452 (72.12%), Query Frame = 0


Query: 86  DEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSLIAKFEAIDELD 145
           +++L+R+   L D    ++WRL+ KDF RVD ++RTT+R+ R+EFL +L+ K+  +  LD
Sbjct: 13  EDLLVRVYECL-DPPCRKTWRLISKDFLRVDSLTRTTIRILRVEFLPTLLFKYPNLSSLD 72

Query: 146 LSICPRINDGTV---SIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYS 205
           LS+CP+++D  V   ++   +    ++SL LSRS+ +   GLE + R C  LE VD+S+ 
Sbjct: 73  LSVCPKLDDDVVLRLALDGAISTLGIKSLNLSRSTAVRARGLETLARMCHALERVDVSHC 132

Query: 206 WGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVE 265
           WGFGDREAAA+S+   L+E+++DKCL ++DVGLARIVVGC  L ++SLKWC+++SDLG++
Sbjct: 133 WGFGDREAAALSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGID 192

Query: 266 LLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEHGCPSLK 325
           LLCK C  L+ LD+SYLK+TN+S+R++A L KLEVL MV C  +DD GLQ+LE+G PSL+
Sbjct: 193 LLCKICKGLKSLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQ 252

Query: 326 ELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLDGTQ 385
           E+D++RCD +   GL S++RGH  ++ L AS+C SE+S   L ++K LK LK I +DG  
Sbjct: 253 EVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAH 312

Query: 386 LSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDAAISS 445
           +S +    +S   + L+E+GLS+C  VTD  +I L   C+ LK LNL CC  +TD AIS+
Sbjct: 313 VSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISA 372

Query: 446 MAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLL 505
           +A SC+ L +LKLESC++ITE+ L  LG Y  L++ELDLTDC GVND+GLE +SKCS L 
Sbjct: 373 VAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQ 432

Query: 506 SLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
            LKLGLCTNI+D G+  I   C ++ ELDLYR
Sbjct: 433 RLKLGLCTNISDKGIFHIGSKCSKLLELDLYR 463

[Close]

BLAST of Carg16995 vs. TAIR 10
Match: AT5G01720.1 (RNI-like superfamily protein )

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-94
Identity = 188/458 (41.05%), Postives = 272/458 (59.39%), Query Frame = 0


Query: 77  PFPLLLNFPDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRIEFLSSLIA 136
           PF LL    + + I L     + SD +S+ L CK FY+++   R +L+  R ++L  ++ 
Sbjct: 12  PFDLLSE--ELVFIILDLISPNPSDLKSFSLTCKSFYQLESKHRGSLKPLRSDYLPRILT 71

Query: 137 KFEAIDELDLSICPRINDGTVSIFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEM 196
           ++    +LDL+ CPR+ D  +S+   L    LRSL LSRS   S  GL R+   C  L  
Sbjct: 72  RYRNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLVE 131

Query: 197 VDMSYSWGFGDREAAAVSNCAELKEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQV 256
           +D+S +    D +AA V+    L+ ++L +C  +TD+G+  I VGC +L  +SLKWC+ V
Sbjct: 132 IDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGV 191

Query: 257 SDLGVELLCKKCFDLRVLDLSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEH 316
            DLGV LL  KC D+R LDLSYL +T + L  +  L  LE L++ GC  VDD  L+ L H
Sbjct: 192 GDLGVGLLAVKCKDIRTLDLSYLPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRH 251

Query: 317 GCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAI 376
            C SLK+LD S C  +   GLTS+L G   L++LD S+C S +S D    LK +  L++I
Sbjct: 252 DCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSI 311

Query: 377 RLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSIT 436
           RLDG  ++      I      L E+ LSKC  VTD  +  L+ +   L+ L++TCC  ++
Sbjct: 312 RLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCRKLS 371

Query: 437 DAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLS 496
             +I+ +A SC  L+SLK+ESC++++  + + +G  C LLEELDLTD   ++D+GL+ +S
Sbjct: 372 RVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTD-NEIDDEGLKSIS 431

Query: 497 KCSQLLSLKLGLCTNITDTGLIKIARNCKRIYELDLYR 535
            C  L SLKLG+C NITD GL  I   C  + ELDLYR
Sbjct: 432 SCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYR 466

[Close]

BLAST of Carg16995 vs. TAIR 10
Match: AT4G15475.1 (F-box/RNI-like superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 8.5e-38
Identity = 130/498 (26.10%), Postives = 223/498 (44.78%), Query Frame = 0


Query: 85  PDEILIRLRRYLTDDSDSRSWRLVCKDFYRVDLISRTTLRVRRI----EFLSSLIAKFEA 144
           P+E+++ + R L    +  +  LVCK +  ++  SRTTLR+       +F+S L  +F  
Sbjct: 12  PEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFLY 71

Query: 145 IDELDL---------SICP-------------------RINDGTVS-------------- 204
           I  + +         S+ P                   ++ D T S              
Sbjct: 72  ITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTG 131

Query: 205 -IFLGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVSN-C 264
              L  GF R+ +L L     +S +GL  + + CT L+ +D+   +  GD+  AAV   C
Sbjct: 132 LTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAVGKFC 191

Query: 265 AELKEVRLDKCLGVTDVGLARIVVGCGR-LERLSLKWCLQVSDLGVELLCKKCFDLRVLD 324
            +L+E+ L  C G+TDVG+  +VVGC + L+ + +    +++DL +E +   C  L VL 
Sbjct: 192 KQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLY 251

Query: 325 LSYLKVTNESLRAVASLPKLEVLIMVGCLSVDDLGLQYLEHGCPSLKELDISRCDGIRPY 384
           L    + ++ L AVA        + + C+SV D+    +   C SL+ L +         
Sbjct: 252 LDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDK 311

Query: 385 GLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLDGT-QLSSAFFDVISVH 444
           G+ ++ +G   L+ L  S C+              K L+ + ++G   + +   + I   
Sbjct: 312 GMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKS 371

Query: 445 GKYLVELGLSKCNGVTDANIIQLITRCIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLK 504
              L EL L  C  + ++ + ++   C  L++L+L  C  I D A+ S+A  C+ L  L 
Sbjct: 372 CPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLH 431

Query: 505 LESCNMITERSLYRLGLYCSLLEELDLTDCCGVNDKGLECLSKCSQLLSLKLGLCTNITD 533
           +  C  I  + +  +G +C  L EL L  C  V +K L  + K   L  L +  C  I+D
Sbjct: 432 IRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISD 491

[Close]

BLAST of Carg16995 vs. TAIR 10
Match: AT5G25350.1 (EIN3-binding F box protein 2 )

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-31
Identity = 101/381 (26.51%), Postives = 180/381 (47.24%), Query Frame = 0


Query: 164 GFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAELKEV 223
           G   LR + L     +S +GL  + R+C  +E +D+S   G  D    A++ NC  L ++
Sbjct: 165 GCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVAIAENCVNLSDL 224

Query: 224 RLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGVE-LLCKKCFDLRVLDLSYLKV 283
            +D C GV + GL  I   C  L  +S++ C ++ D GV  LL +    L  + L  L V
Sbjct: 225 TIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNV 284

Query: 284 TNESLRAVASL-PKLEVLIMVGCLSVDDLGLQYLEH--GCPSLKELDISRCDGIRPYGLT 343
           +  SL  +      +  L++ G   V++ G   + +  G   LK L +  C G+   GL 
Sbjct: 285 SGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLE 344

Query: 344 SVLRGHDGLEQLDASYCFSELSTDSLYWLKNLKCLKAIRLDGTQLSSAF--FDVISVHGK 403
           +V  G   L+ +  + C        +   K+   L++++L+     + F     +   G 
Sbjct: 345 AVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGS 404

Query: 404 YLVELGLSKCNGVTDANIIQLI--TRCIGLKVLNLTCCHSITDAAISSMAGSCQKLMSLK 463
            L    L+ C G++D N    +    C  L+ L++ CC    DA+++ +   C +L  ++
Sbjct: 405 KLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVE 464

Query: 464 LESCNMITERSLYRLGLYCSL-LEELDLTDCCGVNDKGLECLSKC--SQLLSLKLGLCTN 523
           L   N +T+  +  L    ++ L +++L++C  V+D  +  +S C    L SL L  C N
Sbjct: 465 LCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKN 524

Query: 524 ITDTGLIKIARNCKRIYELDL 533
           IT+  L+ +A+NC  + +LD+
Sbjct: 525 ITNASLVAVAKNCYSVNDLDI 545

[Close]

BLAST of Carg16995 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 113.2 bits (282), Expect = 6.3e-25
Identity = 104/406 (25.62%), Postives = 166/406 (40.89%), Query Frame = 0


Query: 161 LGLGFSRLRSLILSRSSGLSYMGLERVMRACTGLEMVDMSYSWGFGDREAAAVS-NCAEL 220
           +G     L SL L   S ++  GL  +   C  LE ++++      D+   A++ +C  L
Sbjct: 172 IGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNL 231

Query: 221 KEVRLDKCLGVTDVGLARIVVGCGRLERLSLKWCLQVSDLGV-ELLCKKCFDLRVLDLSY 280
            E+ L+ C  + D GL  I   C +L+ +S+K C  V D G+  LL      L  L L  
Sbjct: 232 TELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQM 291

Query: 281 LKVTNESLRAV-----------------------------ASLPKLEVLIMVGCLSVDDL 340
           L VT+ SL  V                               L KL  L +  C  V D+
Sbjct: 292 LNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDM 351

Query: 341 GLQYLEHGCPSLKELDISRCDGIRPYGLTSVLRGHDGLEQLDASYCFSELSTDSLYWLKN 400
           GL+ +  GCP++K+  IS+   +   GL S  +    LE L    C              
Sbjct: 352 GLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRV----------- 411

Query: 401 LKCLKAIRLDGTQLSSAFFDVISVHGKYLVELGLSKCNGVTDANI-IQLITRCIGLKVLN 460
                      TQ    FF  +   G+ L    L  C  + D    +   + C  L+ L+
Sbjct: 412 -----------TQF--GFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLS 471

Query: 461 LTCCHSITDAAISSMAGSCQKLMSLKLESCNMITERSLYRLGLYCSLLEELDLTDCCGVN 520
           +  C    DA ++++   C +L  + L     ITE     L L  S L +++ + C  + 
Sbjct: 472 IRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGF--LHLIQSSLVKINFSGCSNLT 531

Query: 521 DKGLECLSKCS--QLLSLKLGLCTNITDTGLIKIARNCKRIYELDL 533
           D+ +  ++  +   L  L +  C+NITD  L+ IA NC+ + +LD+
Sbjct: 532 DRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDI 551

The following BLAST results are available for this feature:

BLAST of Carg16995 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022363.1	3.8e-306	100.00	F-box/LRR-repeat protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588569.1	3.6e-264	100.00	F-box/LRR-repeat protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022931715.1	1.3e-261	99.13	F-box/LRR-repeat protein 3 isoform X1 [Cucurbita moschata]	[more]
XP_023530541.1	1.0e-258	97.83	F-box/LRR-repeat protein 3 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023530543.1	1.0e-258	97.83	F-box/LRR-repeat protein 3 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg16995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWU5	1.8e-93	41.05	F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana OX=3702 GN=FBL3 PE=2 SV=1	[more]
Q9C5D2	1.2e-36	26.10	F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana OX=3702 GN=FBL4 PE=2 SV=1	[more]
Q708Y0	3.7e-30	26.51	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1	[more]
Q9CZV8	3.2e-29	28.61	F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3	[more]
Q58DG6	2.0e-28	29.33	F-box/LRR-repeat protein 20 OS=Bos taurus OX=9913 GN=FBXL20 PE=2 SV=2	[more]

BLAST of Carg16995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F090	6.2e-262	99.13	F-box/LRR-repeat protein 3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437...	[more]
A0A6J1EUF5	1.0e-256	98.05	F-box/LRR-repeat protein 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437...	[more]
A0A6J1I0Y8	2.8e-254	96.31	F-box/LRR-repeat protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11146843...	[more]
A0A6J1HXT4	4.6e-249	95.23	F-box/LRR-repeat protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11146843...	[more]
A0A1S3BQK8	2.4e-221	85.03	F-box/LRR-repeat protein 3 OS=Cucumis melo OX=3656 GN=LOC103492139 PE=4 SV=1	[more]

BLAST of Carg16995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27920.1	2.7e-132	51.11	F-box family protein	[more]
AT5G01720.1	1.3e-94	41.05	RNI-like superfamily protein	[more]
AT4G15475.1	8.5e-38	26.10	F-box/RNI-like superfamily protein	[more]
AT5G25350.1	2.7e-31	26.51	EIN3-binding F box protein 2	[more]
AT2G25490.1	6.3e-25	25.62	EIN3-binding F box protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 268..292 e-value: 8.5 score: 15.1 coord: 395..420 e-value: 13.0 score: 13.7 coord: 499..523 e-value: 3.8 score: 16.5 coord: 242..267 e-value: 0.014 score: 24.6 coord: 447..472 e-value: 0.19 score: 20.8 coord: 473..498 e-value: 3.8 score: 16.5 coord: 293..317 e-value: 630.0 score: 0.5 coord: 138..163 e-value: 580.0 score: 0.8 coord: 165..190 e-value: 450.0 score: 1.6 coord: 318..343 e-value: 0.014 score: 24.5 coord: 216..241 e-value: 0.69 score: 19.0 coord: 421..446 e-value: 0.11 score: 21.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 80..267 e-value: 1.1E-20 score: 75.8 coord: 364..534 e-value: 7.0E-32 score: 112.7
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 268..361 e-value: 6.6E-17 score: 63.3
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 318..338 e-value: 0.41 score: 10.8 coord: 423..444 e-value: 0.32 score: 11.2 coord: 497..521 e-value: 0.18 score: 12.0 coord: 473..496 e-value: 0.0023 score: 17.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR13318:SF91	F-BOX/LRR-REPEAT PROTEIN 3	coord: 86..534
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 86..534
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 346..533
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 129..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16995-RA	Carg16995-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding