Homology
BLAST of Carg12922 vs. NCBI nr
Match:
KAG7023735.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
XP_023515616.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1073.2 bits (2774), Expect = 8.4e-310
Identity = 538/548 (98.18%), Postives = 541/548 (98.72%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYS CGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSFCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQ+LFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQELFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS+SQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
KAG6590068.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1067.8 bits (2760), Expect = 3.2e-308
Identity = 536/548 (97.81%), Postives = 541/548 (98.72%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS S L KSSSSLVESTIFAA F+LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSSLYKSSSSLVESTIFAATFSLTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINA+SLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINALSLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIP VLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPSVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS+SQ+HGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQIHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
XP_022987264.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima])
HSP 1 Score: 1066.6 bits (2757), Expect = 7.1e-308
Identity = 536/548 (97.81%), Postives = 539/548 (98.36%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKAVVQLS VEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVD+KDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. NCBI nr
Match:
XP_022960640.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata])
HSP 1 Score: 1059.3 bits (2738), Expect = 1.1e-305
Identity = 533/548 (97.26%), Postives = 536/548 (97.81%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS RLCKSSSS VES AP A+TSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYA SVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKA+VQLSAVEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 545
BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 529.3 bits (1362), Expect = 5.3e-149
Identity = 269/510 (52.75%), Postives = 370/510 (72.55%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
+TSL + + + + Q H +M+ L++DNL +++FI ACS+ G YA+SVF+++ P+
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77
Query: 87 LRLYNTAVKALSQTSSP---INAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQ 146
L+NT ++ALS P AI++Y ++ +PD++T PFVLK V++S V GRQ
Sbjct: 78 TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 147 IHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAE 206
IH Q V G D+ V+V T LIQMY SCG + DARK+FD + KDV +WNA++AGY KV E
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 207 LNSARKVFDKMP--QRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVL 266
++ AR + + MP RN +SWT +I+GYA++ R AIE+F++M +E VEPDE+ +LAVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 267 SACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVI 326
SACADLG+LELGE I +Y++ + R V L NA+IDMYAKSGNI +AL+VFE + ++V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 327 TWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRM 386
TW+T+IA +A HG G +A+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+ FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 387 QSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADL 446
+S Y I P IEHYGCMIDLL RAG L+EA ++ + MP++ANAAIWGSLLAASN H D +L
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 447 AEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN 506
E+AL L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ N
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 507 RVHEFLAGDRSDSQLHGIYPVLCNIIVQLK 532
RV++F++GD + Q+ I+ +L + +Q++
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-109
Identity = 192/472 (40.68%), Postives = 307/472 (65.04%), Query Frame = 0
Query: 42 QIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTS 101
+I+ ++ L Q + ++++ + C + YA +F+ ++P++ LYN+ ++A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 102 SPINAISLYSRILIEGLR-PDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVA 161
+ I +Y ++L + PD +T PF+ K+ L + +G+Q+H G V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 162 TSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVI 221
+LI MY + DA K+FD + +DV WN++++GY ++ ++ A+ +F M + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 222 SWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYI 281
SWTA+I+GY A++ FR+MQL +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 282 EKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAI 341
E+ + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+ A HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 342 DMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDL 401
+ F M++A+V+PN +TF+ +LSACSHVGM G YF+ M+ Y+I+P+IEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 402 LARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNY 461
LARAG L+ A ++ + MP + ++ IWGSLL++ T + D+A A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 462 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS 513
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 391.0 bits (1003), Expect = 2.3e-107
Identity = 188/497 (37.83%), Postives = 305/497 (61.37%), Query Frame = 0
Query: 43 IHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSS 102
+HG + A+ D + + IH S G A VF+ D+ +N+ + Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 103 PINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATS 162
P A+ L+ ++ E ++ T+ VL A ++ +E GRQ+ + + ++ ++ +A +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 163 LIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISW 222
++ MY+ CG + DA++LFD ++ KD W M+ GY + +AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 223 TALIAGYAQTNRPDAAIELFRKMQLEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 282
ALI+ Y Q +P+ A+ +F ++QL+K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 283 KHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAID 342
KH + + +ALI MY+K G++ ++ EVF +++ + V WS MI +A+HG G +A+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 343 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLL 402
MF +M++A V+PN VTF + ACSH G+VD F++M+S Y I P +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 403 ARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYT 462
R+GYL++A K + MP + ++WG+LL A H + +LAE A L +LEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 463 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYP 522
LLSN YA LG+W +RK MR G+KK PG S IEI+ +HEFL+GD + +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 523 VLCNIIVQLKMAGSYPE 539
L ++ +LK G PE
Sbjct: 633 KLHEVMEKLKSNGYEPE 649
BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 389.0 bits (998), Expect = 8.6e-107
Identity = 200/494 (40.49%), Postives = 289/494 (58.50%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHAC---SSLGLYLYAFSVFSNKAHP 88
S L C + QIH ML L QD+ +++F+ C +S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
D L+N ++ S + P ++ LY R+L ++YT P +LKA LSA E QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
Q G + DV SLI Y+ G A LFD + D WN+++ GYVK +++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACA 268
A +F KM ++N ISWT +I+GY Q + A++LF +MQ VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 269 DLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWST 328
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 329 MIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVY 388
+I+ A HG G +AI F+ M+K ++PN +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 389 KIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQA 448
++P IEHYGC++DLL RAG L EA++ Q+MP + NA IWG+LL A H++ +L E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 449 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHE 508
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + HE
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 509 FLAGDRSDSQLHGI 520
FLAGDRS ++ I
Sbjct: 499 FLAGDRSHPEIEKI 512
BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 384.4 bits (986), Expect = 2.1e-105
Identity = 217/616 (35.23%), Postives = 318/616 (51.62%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLY---LYAFSVFSNKAHP 88
SLL NC+ + + IH M+ L N LS+ I C + YA SVF P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
+L ++NT + + +S P++A+ LY ++ GL P+SYT PFVLK+ + A + G+QIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
+ G D D+ V TSLI MY G + DA K+FD +DV + A++ GY +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDE----------- 268
+A+K+FD++P ++V+SW A+I+GYA+T A+ELF+ M V PDE
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 269 ------------------------------------------------------------ 328
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 329 ------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH- 388
+ ML++L ACA LGA+++G WIH YI+K
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 389 -SLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDM 448
+ L +LIDMYAK G+I A +VF ++ HKS+ +W+ MI A+HG + D+
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 449 FLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLA 508
F RM K ++P+++TF+ +LSACSH GM+D+GR+ F M YK+ P++EHYGCMIDLL
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 509 RAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTL 539
+G +EA+++ M E + IW SLL A H + +L E +L K+EPEN G+Y L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
BLAST of Carg12922 vs. ExPASy TrEMBL
Match:
A0A6J1JID8 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=3661 GN=LOC111484870 PE=4 SV=1)
HSP 1 Score: 1066.6 bits (2757), Expect = 3.4e-308
Identity = 536/548 (97.81%), Postives = 539/548 (98.36%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKAVVQLS VEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVD+KDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. ExPASy TrEMBL
Match:
A0A6J1H9N0 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3662 GN=LOC111461370 PE=4 SV=1)
HSP 1 Score: 1059.3 bits (2738), Expect = 5.5e-306
Identity = 533/548 (97.26%), Postives = 536/548 (97.81%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS RLCKSSSS VES AP A+TSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSLGLYLYA SVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61 RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSYTIPFVLKA+VQLSAVEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 545
BLAST of Carg12922 vs. ExPASy TrEMBL
Match:
A0A5D3CFJ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001140 PE=4 SV=1)
HSP 1 Score: 927.5 bits (2396), Expect = 2.5e-266
Identity = 461/548 (84.12%), Postives = 498/548 (90.88%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WSFS L KSSSS +IF +P TSLLSNCR H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
+FI AC+SLGL YAFS+FSNKAHPDLRLYNTA+KALS+TSSPINAI LY+RI I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVV+LSAVEVGRQIH QTVSS LD DVNVATSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
D VDFKDVALWNAMVAGYVK+ EL +ARKVF++MPQRNVISWT LIAGYAQTNRP AIE
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMK KSVITWST+IAA+ALHGLG +AIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYF++MQS+Y+I+P+IEHYGCMIDLLARAGYLQEA KL DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAASNTH+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
K+MRNAGVKKAPGGS IEINNRV+EFLAGD+SDS +H IY VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 541 SKFLNYDE 549
SKFLNYDE
Sbjct: 541 SKFLNYDE 548
BLAST of Carg12922 vs. ExPASy TrEMBL
Match:
A0A6J1D0Q9 (pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=3673 GN=LOC111016516 PE=4 SV=1)
HSP 1 Score: 922.9 bits (2384), Expect = 6.1e-265
Identity = 454/548 (82.85%), Postives = 504/548 (91.97%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS S LCKSS ++ TIF AP A SLLS+C DPRH+ QIHGFM+ RALDQDNL+LS
Sbjct: 1 MRWSLSILCKSSPFFIQRTIFTAPHAFNSLLSSCCDPRHVPQIHGFMVPRALDQDNLILS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
RFI ACSSL LY YA+SVFS+K +PDLRLYNT +KALSQTSSPI+AISL+SRI EGL+P
Sbjct: 61 RFIDACSSLRLYTYAYSVFSSKTNPDLRLYNTTIKALSQTSSPIHAISLFSRIRSEGLQP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVV++S ++VGRQIHTQTV S LDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYSIPFVLKAVVKISTLQVGRQIHTQTVFSALDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
D V ++DVALWN+MVAGYVKVA+LNSARK+FD+MPQRNVI+WTALIAGYAQ NRPD AI
Sbjct: 181 DFVPYRDVALWNSMVAGYVKVAKLNSARKLFDEMPQRNVITWTALIAGYAQNNRPDEAIA 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQL++VEPDEIAMLAVLSACADLGALELGEWIHNYI KH LCRIVPLYNALIDMY+
Sbjct: 241 LFRKMQLQEVEPDEIAMLAVLSACADLGALELGEWIHNYIVKHGLCRIVPLYNALIDMYS 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALE+FENMK KSVITWSTMIAA+ALHG GG+AID+FLRMEKARVRPNE+TFIA
Sbjct: 301 KSGNIRRALEIFENMKQKSVITWSTMIAALALHGRGGEAIDIFLRMEKARVRPNEITFIA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVD+GRYYF+RMQS YKI+P+IEHYGCMIDLLARAG+LQEAQK+ +DMP+E
Sbjct: 361 ILSACSHVGMVDMGRYYFDRMQSTYKIKPQIEHYGCMIDLLARAGHLQEAQKVLKDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAASN HRDA+LAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNIHRDAELAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
KVMRNAGVKKAPGGSFIEINN+V+EFLAGD+SDSQLH I+ VLC IVQLKMAG +EW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNKVYEFLAGDKSDSQLHEIFHVLCKTIVQLKMAGLLQDEW 540
Query: 541 SKFLNYDE 549
SKFL++DE
Sbjct: 541 SKFLDFDE 548
BLAST of Carg12922 vs. ExPASy TrEMBL
Match:
A0A5A7UQ55 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001200 PE=4 SV=1)
HSP 1 Score: 920.6 bits (2378), Expect = 3.0e-264
Identity = 457/548 (83.39%), Postives = 496/548 (90.51%), Query Frame = 0
Query: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WSFS L KSSSS +IF +P TSLLSNCR H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
+FI AC+SLGL YAFS+FSNKAHPDLRLYNTA+KALS+TSSPI+AI LY+RI I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120
Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVV+LSAVEVGRQIH QTVSS LD DVNVATSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
D V FKDVALWNAMVAGYVK+ EL +ARKVF++MPQRNVISWT LIAGYAQTNRP AIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMK KSVITWST+IAA+ALHGLG +AIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
ILSACSHVGMVDVGRYYF++MQS+Y+I+P+IEHYGCMIDLLARAGYLQEA KL DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAASNTH+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
K+MRNAGVKKAPGGS IEINNRV+EFLAGD+SDS +H +Y VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540
Query: 541 SKFLNYDE 549
KFLNYDE
Sbjct: 541 CKFLNYDE 548
BLAST of Carg12922 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 529.3 bits (1362), Expect = 3.8e-150
Identity = 269/510 (52.75%), Postives = 370/510 (72.55%), Query Frame = 0
Query: 27 LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
+TSL + + + + Q H +M+ L++DNL +++FI ACS+ G YA+SVF+++ P+
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77
Query: 87 LRLYNTAVKALSQTSSP---INAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQ 146
L+NT ++ALS P AI++Y ++ +PD++T PFVLK V++S V GRQ
Sbjct: 78 TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 147 IHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAE 206
IH Q V G D+ V+V T LIQMY SCG + DARK+FD + KDV +WNA++AGY KV E
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 207 LNSARKVFDKMP--QRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVL 266
++ AR + + MP RN +SWT +I+GYA++ R AIE+F++M +E VEPDE+ +LAVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 267 SACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVI 326
SACADLG+LELGE I +Y++ + R V L NA+IDMYAKSGNI +AL+VFE + ++V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 327 TWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRM 386
TW+T+IA +A HG G +A+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+ FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 387 QSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADL 446
+S Y I P IEHYGCMIDLL RAG L+EA ++ + MP++ANAAIWGSLLAASN H D +L
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 447 AEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN 506
E+AL L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ N
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 507 RVHEFLAGDRSDSQLHGIYPVLCNIIVQLK 532
RV++F++GD + Q+ I+ +L + +Q++
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Carg12922 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-110
Identity = 192/472 (40.68%), Postives = 307/472 (65.04%), Query Frame = 0
Query: 42 QIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTS 101
+I+ ++ L Q + ++++ + C + YA +F+ ++P++ LYN+ ++A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 102 SPINAISLYSRILIEGLR-PDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVA 161
+ I +Y ++L + PD +T PF+ K+ L + +G+Q+H G V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 162 TSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVI 221
+LI MY + DA K+FD + +DV WN++++GY ++ ++ A+ +F M + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 222 SWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYI 281
SWTA+I+GY A++ FR+MQL +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 282 EKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAI 341
E+ + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+ A HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 342 DMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDL 401
+ F M++A+V+PN +TF+ +LSACSHVGM G YF+ M+ Y+I+P+IEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 402 LARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNY 461
LARAG L+ A ++ + MP + ++ IWGSLL++ T + D+A A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 462 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS 513
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
BLAST of Carg12922 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 391.0 bits (1003), Expect = 1.6e-108
Identity = 188/497 (37.83%), Postives = 305/497 (61.37%), Query Frame = 0
Query: 43 IHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSS 102
+HG + A+ D + + IH S G A VF+ D+ +N+ + Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 103 PINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATS 162
P A+ L+ ++ E ++ T+ VL A ++ +E GRQ+ + + ++ ++ +A +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 163 LIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISW 222
++ MY+ CG + DA++LFD ++ KD W M+ GY + +AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 223 TALIAGYAQTNRPDAAIELFRKMQLEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 282
ALI+ Y Q +P+ A+ +F ++QL+K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 283 KHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAID 342
KH + + +ALI MY+K G++ ++ EVF +++ + V WS MI +A+HG G +A+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 343 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLL 402
MF +M++A V+PN VTF + ACSH G+VD F++M+S Y I P +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 403 ARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYT 462
R+GYL++A K + MP + ++WG+LL A H + +LAE A L +LEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 463 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYP 522
LLSN YA LG+W +RK MR G+KK PG S IEI+ +HEFL+GD + +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 523 VLCNIIVQLKMAGSYPE 539
L ++ +LK G PE
Sbjct: 633 KLHEVMEKLKSNGYEPE 649
BLAST of Carg12922 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 389.0 bits (998), Expect = 6.1e-108
Identity = 200/494 (40.49%), Postives = 289/494 (58.50%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHAC---SSLGLYLYAFSVFSNKAHP 88
S L C + QIH ML L QD+ +++F+ C +S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
D L+N ++ S + P ++ LY R+L ++YT P +LKA LSA E QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
Q G + DV SLI Y+ G A LFD + D WN+++ GYVK +++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACA 268
A +F KM ++N ISWT +I+GY Q + A++LF +MQ VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 269 DLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWST 328
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 329 MIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVY 388
+I+ A HG G +AI F+ M+K ++PN +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 389 KIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQA 448
++P IEHYGC++DLL RAG L EA++ Q+MP + NA IWG+LL A H++ +L E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 449 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHE 508
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + HE
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 509 FLAGDRSDSQLHGI 520
FLAGDRS ++ I
Sbjct: 499 FLAGDRSHPEIEKI 512
BLAST of Carg12922 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 384.4 bits (986), Expect = 1.5e-106
Identity = 217/616 (35.23%), Postives = 318/616 (51.62%), Query Frame = 0
Query: 29 SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLY---LYAFSVFSNKAHP 88
SLL NC+ + + IH M+ L N LS+ I C + YA SVF P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 89 DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
+L ++NT + + +S P++A+ LY ++ GL P+SYT PFVLK+ + A + G+QIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
+ G D D+ V TSLI MY G + DA K+FD +DV + A++ GY +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDE----------- 268
+A+K+FD++P ++V+SW A+I+GYA+T A+ELF+ M V PDE
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 269 ------------------------------------------------------------ 328
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 329 ------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH- 388
+ ML++L ACA LGA+++G WIH YI+K
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 389 -SLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDM 448
+ L +LIDMYAK G+I A +VF ++ HKS+ +W+ MI A+HG + D+
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 449 FLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLA 508
F RM K ++P+++TF+ +LSACSH GM+D+GR+ F M YK+ P++EHYGCMIDLL
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 509 RAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTL 539
+G +EA+++ M E + IW SLL A H + +L E +L K+EPEN G+Y L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7023735.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023515616.1 | 8.4e-310 | 98.18 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pep... | [more] |
KAG6590068.1 | 3.2e-308 | 97.81 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022987264.1 | 7.1e-308 | 97.81 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima] | [more] |
XP_022960640.1 | 1.1e-305 | 97.26 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q9FMA1 | 5.3e-149 | 52.75 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 1.9e-109 | 40.68 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 2.3e-107 | 37.83 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 8.6e-107 | 40.49 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 2.1e-105 | 35.23 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JID8 | 3.4e-308 | 97.81 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1H9N0 | 5.5e-306 | 97.26 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3... | [more] |
A0A5D3CFJ6 | 2.5e-266 | 84.12 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1D0Q9 | 6.1e-265 | 82.85 | pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=... | [more] |
A0A5A7UQ55 | 3.0e-264 | 83.39 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56310.1 | 3.8e-150 | 52.75 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G20540.1 | 1.3e-110 | 40.68 | mitochondrial editing factor 21 | [more] |
AT2G29760.1 | 1.6e-108 | 37.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 6.1e-108 | 40.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 1.5e-106 | 35.23 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |