Carg12922 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg12922
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr10: 3764338 .. 3765984 (+)
RNA-Seq ExpressionCarg12922
SyntenyCarg12922
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTGGTCCTTCTCCCGCCTCTGCAAATCGTCTTCTTCCTTGGTCGAATCCACCATTTTCGCAGCCCCTTTCGCGTTAACTTCCCTTCTCAGCAACTGCCGCGACCCTCGCCACATTTATCAAATCCATGGCTTCATGTTGCACAGAGCTCTCGATCAGGATAATCTCCTCCTCAGCCGATTCATCCATGCGTGTTCATCTCTTGGTCTTTATTTATACGCTTTTTCTGTCTTCTCAAATAAAGCCCACCCCGATCTTCGTCTCTACAACACCGCCGTTAAAGCGCTATCGCAGACCTCCTCACCCATTAACGCCATTTCGCTTTACTCCAGGATTCTGATTGAGGGATTGCGGCCTGATTCGTACACTATTCCCTTTGTTTTGAAGGCCGTCGTTCAGTTGTCCGCCGTTGAAGTGGGGCGGCAGATTCATACCCAGACGGTTTCTTCGGGTTTGGATACGGATGTGAATGTTGCTACTTCGTTGATTCAAATGTATTCCTCTTGTGGGTGTGTTTCTGACGCTCGCAAGCTGTTTGATTTAGTGGATTTTAAGGATGTAGCTTTGTGGAACGCCATGGTTGCTGGGTATGTTAAAGTTGCAGAACTTAACAGTGCGCGTAAGGTGTTCGACAAAATGCCTCAAAGAAATGTGATATCATGGACTGCCTTGATTGCTGGGTATGCCCAAACCAATAGGCCTGATGCAGCGATTGAGCTCTTCAGGAAGATGCAGCTTGAGAAAGTGGAGCCTGATGAAATTGCAATGTTGGCTGTGCTCTCCGCTTGTGCTGATCTGGGTGCTCTTGAACTTGGGGAGTGGATCCATAACTACATTGAAAAGCATAGTTTGTGCAGGATTGTTCCATTGTACAACGCCCTTATAGACATGTATGCAAAATCAGGCAACATAGGAAGAGCACTGGAAGTTTTTGAGAACATGAAGCATAAAAGTGTCATAACCTGGTCCACCATGATTGCTGCCATGGCTCTTCACGGCCTCGGAGGACAAGCTATCGACATGTTCCTTCGAATGGAGAAGGCAAGAGTCAGGCCAAATGAAGTAACATTCATAGCAATCCTATCCGCTTGCAGCCATGTTGGGATGGTGGATGTGGGTCGTTATTATTTCAACAGAATGCAGTCAGTATACAAAATTCAGCCAAGAATTGAGCACTATGGCTGCATGATCGATCTGCTGGCTCGTGCTGGCTATCTTCAAGAGGCACAGAAGCTGTTTCAGGACATGCCATATGAAGCAAATGCAGCGATATGGGGGTCGCTTCTTGCTGCTTCCAATACACATAGGGATGCTGACCTCGCAGAGCAGGCTTTGAGGCATCTAGCTAAGCTAGAGCCTGAAAACAGTGGGAATTATACGCTTTTATCCAACACATATGCTGCTCTTGGCAGGTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCAGGGGTAAAGAAGGCTCCGGGTGGAAGCTTTATTGAAATTAATAACAGAGTGCACGAGTTCCTGGCTGGAGATCGGTCAGATTCTCAGTTACATGGGATTTATCCAGTTTTGTGCAACATAATTGTGCAGCTCAAAATGGCCGGGTCGTACCCAGAGGAATGGAGTAAGTTTCTTAACTACGATGAGTGA

mRNA sequence

ATGCGTTGGTCCTTCTCCCGCCTCTGCAAATCGTCTTCTTCCTTGGTCGAATCCACCATTTTCGCAGCCCCTTTCGCGTTAACTTCCCTTCTCAGCAACTGCCGCGACCCTCGCCACATTTATCAAATCCATGGCTTCATGTTGCACAGAGCTCTCGATCAGGATAATCTCCTCCTCAGCCGATTCATCCATGCGTGTTCATCTCTTGGTCTTTATTTATACGCTTTTTCTGTCTTCTCAAATAAAGCCCACCCCGATCTTCGTCTCTACAACACCGCCGTTAAAGCGCTATCGCAGACCTCCTCACCCATTAACGCCATTTCGCTTTACTCCAGGATTCTGATTGAGGGATTGCGGCCTGATTCGTACACTATTCCCTTTGTTTTGAAGGCCGTCGTTCAGTTGTCCGCCGTTGAAGTGGGGCGGCAGATTCATACCCAGACGGTTTCTTCGGGTTTGGATACGGATGTGAATGTTGCTACTTCGTTGATTCAAATGTATTCCTCTTGTGGGTGTGTTTCTGACGCTCGCAAGCTGTTTGATTTAGTGGATTTTAAGGATGTAGCTTTGTGGAACGCCATGGTTGCTGGGTATGTTAAAGTTGCAGAACTTAACAGTGCGCGTAAGGTGTTCGACAAAATGCCTCAAAGAAATGTGATATCATGGACTGCCTTGATTGCTGGGTATGCCCAAACCAATAGGCCTGATGCAGCGATTGAGCTCTTCAGGAAGATGCAGCTTGAGAAAGTGGAGCCTGATGAAATTGCAATGTTGGCTGTGCTCTCCGCTTGTGCTGATCTGGGTGCTCTTGAACTTGGGGAGTGGATCCATAACTACATTGAAAAGCATAGTTTGTGCAGGATTGTTCCATTGTACAACGCCCTTATAGACATGTATGCAAAATCAGGCAACATAGGAAGAGCACTGGAAGTTTTTGAGAACATGAAGCATAAAAGTGTCATAACCTGGTCCACCATGATTGCTGCCATGGCTCTTCACGGCCTCGGAGGACAAGCTATCGACATGTTCCTTCGAATGGAGAAGGCAAGAGTCAGGCCAAATGAAGTAACATTCATAGCAATCCTATCCGCTTGCAGCCATGTTGGGATGGTGGATGTGGGTCGTTATTATTTCAACAGAATGCAGTCAGTATACAAAATTCAGCCAAGAATTGAGCACTATGGCTGCATGATCGATCTGCTGGCTCGTGCTGGCTATCTTCAAGAGGCACAGAAGCTGTTTCAGGACATGCCATATGAAGCAAATGCAGCGATATGGGGGTCGCTTCTTGCTGCTTCCAATACACATAGGGATGCTGACCTCGCAGAGCAGGCTTTGAGGCATCTAGCTAAGCTAGAGCCTGAAAACAGTGGGAATTATACGCTTTTATCCAACACATATGCTGCTCTTGGCAGGTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCAGGGGTAAAGAAGGCTCCGGGTGGAAGCTTTATTGAAATTAATAACAGAGTGCACGAGTTCCTGGCTGGAGATCGGTCAGATTCTCAGTTACATGGGATTTATCCAGTTTTGTGCAACATAATTGTGCAGCTCAAAATGGCCGGGTCGTACCCAGAGGAATGGAGTAAGTTTCTTAACTACGATGAGTGA

Coding sequence (CDS)

ATGCGTTGGTCCTTCTCCCGCCTCTGCAAATCGTCTTCTTCCTTGGTCGAATCCACCATTTTCGCAGCCCCTTTCGCGTTAACTTCCCTTCTCAGCAACTGCCGCGACCCTCGCCACATTTATCAAATCCATGGCTTCATGTTGCACAGAGCTCTCGATCAGGATAATCTCCTCCTCAGCCGATTCATCCATGCGTGTTCATCTCTTGGTCTTTATTTATACGCTTTTTCTGTCTTCTCAAATAAAGCCCACCCCGATCTTCGTCTCTACAACACCGCCGTTAAAGCGCTATCGCAGACCTCCTCACCCATTAACGCCATTTCGCTTTACTCCAGGATTCTGATTGAGGGATTGCGGCCTGATTCGTACACTATTCCCTTTGTTTTGAAGGCCGTCGTTCAGTTGTCCGCCGTTGAAGTGGGGCGGCAGATTCATACCCAGACGGTTTCTTCGGGTTTGGATACGGATGTGAATGTTGCTACTTCGTTGATTCAAATGTATTCCTCTTGTGGGTGTGTTTCTGACGCTCGCAAGCTGTTTGATTTAGTGGATTTTAAGGATGTAGCTTTGTGGAACGCCATGGTTGCTGGGTATGTTAAAGTTGCAGAACTTAACAGTGCGCGTAAGGTGTTCGACAAAATGCCTCAAAGAAATGTGATATCATGGACTGCCTTGATTGCTGGGTATGCCCAAACCAATAGGCCTGATGCAGCGATTGAGCTCTTCAGGAAGATGCAGCTTGAGAAAGTGGAGCCTGATGAAATTGCAATGTTGGCTGTGCTCTCCGCTTGTGCTGATCTGGGTGCTCTTGAACTTGGGGAGTGGATCCATAACTACATTGAAAAGCATAGTTTGTGCAGGATTGTTCCATTGTACAACGCCCTTATAGACATGTATGCAAAATCAGGCAACATAGGAAGAGCACTGGAAGTTTTTGAGAACATGAAGCATAAAAGTGTCATAACCTGGTCCACCATGATTGCTGCCATGGCTCTTCACGGCCTCGGAGGACAAGCTATCGACATGTTCCTTCGAATGGAGAAGGCAAGAGTCAGGCCAAATGAAGTAACATTCATAGCAATCCTATCCGCTTGCAGCCATGTTGGGATGGTGGATGTGGGTCGTTATTATTTCAACAGAATGCAGTCAGTATACAAAATTCAGCCAAGAATTGAGCACTATGGCTGCATGATCGATCTGCTGGCTCGTGCTGGCTATCTTCAAGAGGCACAGAAGCTGTTTCAGGACATGCCATATGAAGCAAATGCAGCGATATGGGGGTCGCTTCTTGCTGCTTCCAATACACATAGGGATGCTGACCTCGCAGAGCAGGCTTTGAGGCATCTAGCTAAGCTAGAGCCTGAAAACAGTGGGAATTATACGCTTTTATCCAACACATATGCTGCTCTTGGCAGGTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCAGGGGTAAAGAAGGCTCCGGGTGGAAGCTTTATTGAAATTAATAACAGAGTGCACGAGTTCCTGGCTGGAGATCGGTCAGATTCTCAGTTACATGGGATTTATCCAGTTTTGTGCAACATAATTGTGCAGCTCAAAATGGCCGGGTCGTACCCAGAGGAATGGAGTAAGTTTCTTAACTACGATGAGTGA

Protein sequence

MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEWSKFLNYDE
Homology
BLAST of Carg12922 vs. NCBI nr
Match: KAG7023735.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 548

BLAST of Carg12922 vs. NCBI nr
Match: XP_023515616.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1073.2 bits (2774), Expect = 8.4e-310
Identity = 538/548 (98.18%), Postives = 541/548 (98.72%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61  RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYS CGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSFCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQ+LFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQELFQDMPYE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS+SQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQLHGIYPVLCNIIVQLKMAGSYPEEW 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 548

BLAST of Carg12922 vs. NCBI nr
Match: KAG6590068.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1067.8 bits (2760), Expect = 3.2e-308
Identity = 536/548 (97.81%), Postives = 541/548 (98.72%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS S L KSSSSLVESTIFAA F+LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSLSSLYKSSSSLVESTIFAATFSLTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINA+SLYSRILIEGLRP
Sbjct: 61  RFIDACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINALSLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIP VLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPSVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS+SQ+HGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQIHGIYPVLCNIIVQLKMAGSYPEEW 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 548

BLAST of Carg12922 vs. NCBI nr
Match: XP_022987264.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima])

HSP 1 Score: 1066.6 bits (2757), Expect = 7.1e-308
Identity = 536/548 (97.81%), Postives = 539/548 (98.36%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61  RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIPFVLKAVVQLS VEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVD+KDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRV+EFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE 
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 548

BLAST of Carg12922 vs. NCBI nr
Match: XP_022960640.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata])

HSP 1 Score: 1059.3 bits (2738), Expect = 1.1e-305
Identity = 533/548 (97.26%), Postives = 536/548 (97.81%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS  RLCKSSSS VES    AP A+TSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSLGLYLYA SVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61  RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIPFVLKA+VQLSAVEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 545

BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 5.3e-149
Identity = 269/510 (52.75%), Postives = 370/510 (72.55%), Query Frame = 0

Query: 27  LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
           +TSL  +  + + + Q H +M+   L++DNL +++FI ACS+ G   YA+SVF+++  P+
Sbjct: 18  VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77

Query: 87  LRLYNTAVKALSQTSSP---INAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQ 146
             L+NT ++ALS    P     AI++Y ++     +PD++T PFVLK  V++S V  GRQ
Sbjct: 78  TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137

Query: 147 IHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAE 206
           IH Q V  G D+ V+V T LIQMY SCG + DARK+FD +  KDV +WNA++AGY KV E
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197

Query: 207 LNSARKVFDKMP--QRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVL 266
           ++ AR + + MP   RN +SWT +I+GYA++ R   AIE+F++M +E VEPDE+ +LAVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257

Query: 267 SACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVI 326
           SACADLG+LELGE I +Y++   + R V L NA+IDMYAKSGNI +AL+VFE +  ++V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317

Query: 327 TWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRM 386
           TW+T+IA +A HG G +A+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+  FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377

Query: 387 QSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADL 446
           +S Y I P IEHYGCMIDLL RAG L+EA ++ + MP++ANAAIWGSLLAASN H D +L
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437

Query: 447 AEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN 506
            E+AL  L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+  GVKK  G S IE+ N
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497

Query: 507 RVHEFLAGDRSDSQLHGIYPVLCNIIVQLK 532
           RV++F++GD +  Q+  I+ +L  + +Q++
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQ 527

BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-109
Identity = 192/472 (40.68%), Postives = 307/472 (65.04%), Query Frame = 0

Query: 42  QIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTS 101
           +I+  ++   L Q + ++++ +  C  +    YA  +F+  ++P++ LYN+ ++A +  S
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87

Query: 102 SPINAISLYSRILIEGLR-PDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVA 161
              + I +Y ++L +    PD +T PF+ K+   L +  +G+Q+H      G    V   
Sbjct: 88  LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147

Query: 162 TSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVI 221
            +LI MY     + DA K+FD +  +DV  WN++++GY ++ ++  A+ +F  M  + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207

Query: 222 SWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYI 281
           SWTA+I+GY        A++ FR+MQL  +EPDEI++++VL +CA LG+LELG+WIH Y 
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 282 EKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAI 341
           E+    +   + NALI+MY+K G I +A+++F  M+ K VI+WSTMI+  A HG    AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327

Query: 342 DMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDL 401
           + F  M++A+V+PN +TF+ +LSACSHVGM   G  YF+ M+  Y+I+P+IEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387

Query: 402 LARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNY 461
           LARAG L+ A ++ + MP + ++ IWGSLL++  T  + D+A  A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447

Query: 462 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS 513
            LL+N YA LG+W +   +RK++RN  +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499

BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.3e-107
Identity = 188/497 (37.83%), Postives = 305/497 (61.37%), Query Frame = 0

Query: 43  IHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSS 102
           +HG  +  A+  D  + +  IH   S G    A  VF+     D+  +N+ +    Q  S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 103 PINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATS 162
           P  A+ L+ ++  E ++    T+  VL A  ++  +E GRQ+ +    + ++ ++ +A +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 163 LIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISW 222
           ++ MY+ CG + DA++LFD ++ KD   W  M+ GY    +  +AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332

Query: 223 TALIAGYAQTNRPDAAIELFRKMQLEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 282
            ALI+ Y Q  +P+ A+ +F ++QL+K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392

Query: 283 KHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAID 342
           KH +     + +ALI MY+K G++ ++ EVF +++ + V  WS MI  +A+HG G +A+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452

Query: 343 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLL 402
           MF +M++A V+PN VTF  +  ACSH G+VD     F++M+S Y I P  +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512

Query: 403 ARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYT 462
            R+GYL++A K  + MP   + ++WG+LL A   H + +LAE A   L +LEP N G + 
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572

Query: 463 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYP 522
           LLSN YA LG+W     +RK MR  G+KK PG S IEI+  +HEFL+GD +      +Y 
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632

Query: 523 VLCNIIVQLKMAGSYPE 539
            L  ++ +LK  G  PE
Sbjct: 633 KLHEVMEKLKSNGYEPE 649

BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 8.6e-107
Identity = 200/494 (40.49%), Postives = 289/494 (58.50%), Query Frame = 0

Query: 29  SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHAC---SSLGLYLYAFSVFSNKAHP 88
           S L  C     + QIH  ML   L QD+  +++F+  C   +S     YA  VF     P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 89  DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
           D  L+N  ++  S +  P  ++ LY R+L      ++YT P +LKA   LSA E   QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
            Q    G + DV    SLI  Y+  G    A  LFD +   D   WN+++ GYVK  +++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198

Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACA 268
            A  +F KM ++N ISWT +I+GY Q +    A++LF +MQ   VEPD +++   LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258

Query: 269 DLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWST 328
            LGALE G+WIH+Y+ K  +     L   LIDMYAK G +  ALEVF+N+K KSV  W+ 
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318

Query: 329 MIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVY 388
           +I+  A HG G +AI  F+ M+K  ++PN +TF A+L+ACS+ G+V+ G+  F  M+  Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378

Query: 389 KIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQA 448
            ++P IEHYGC++DLL RAG L EA++  Q+MP + NA IWG+LL A   H++ +L E+ 
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438

Query: 449 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHE 508
              L  ++P + G Y   +N +A   +W+++   R++M+  GV K PG S I +    HE
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498

Query: 509 FLAGDRSDSQLHGI 520
           FLAGDRS  ++  I
Sbjct: 499 FLAGDRSHPEIEKI 512

BLAST of Carg12922 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.1e-105
Identity = 217/616 (35.23%), Postives = 318/616 (51.62%), Query Frame = 0

Query: 29  SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLY---LYAFSVFSNKAHP 88
           SLL NC+  + +  IH  M+   L   N  LS+ I  C     +    YA SVF     P
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 89  DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
           +L ++NT  +  + +S P++A+ LY  ++  GL P+SYT PFVLK+  +  A + G+QIH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
              +  G D D+ V TSLI MY   G + DA K+FD    +DV  + A++ GY     + 
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDE----------- 268
           +A+K+FD++P ++V+SW A+I+GYA+T     A+ELF+ M    V PDE           
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277

Query: 269 ------------------------------------------------------------ 328
                                                                       
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337

Query: 329 ------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH- 388
                                         + ML++L ACA LGA+++G WIH YI+K  
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397

Query: 389 -SLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDM 448
             +     L  +LIDMYAK G+I  A +VF ++ HKS+ +W+ MI   A+HG    + D+
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457

Query: 449 FLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLA 508
           F RM K  ++P+++TF+ +LSACSH GM+D+GR+ F  M   YK+ P++EHYGCMIDLL 
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517

Query: 509 RAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTL 539
            +G  +EA+++   M  E +  IW SLL A   H + +L E    +L K+EPEN G+Y L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577

BLAST of Carg12922 vs. ExPASy TrEMBL
Match: A0A6J1JID8 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=3661 GN=LOC111484870 PE=4 SV=1)

HSP 1 Score: 1066.6 bits (2757), Expect = 3.4e-308
Identity = 536/548 (97.81%), Postives = 539/548 (98.36%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS SRLCKSSSS VESTIF APFALTSLLSNCRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSLGLYLYAFSVFSNK HPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61  RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIPFVLKAVVQLS VEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVD+KDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRV+EFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE 
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 548

BLAST of Carg12922 vs. ExPASy TrEMBL
Match: A0A6J1H9N0 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3662 GN=LOC111461370 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 5.5e-306
Identity = 533/548 (97.26%), Postives = 536/548 (97.81%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS  RLCKSSSS VES    AP A+TSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1   MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSLGLYLYA SVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP
Sbjct: 61  RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSYTIPFVLKA+VQLSAVEVGRQIHTQTVSSGLDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNIGRALEVFENMKHK+VITWSTMIAAMALHGLGGQA DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 545

BLAST of Carg12922 vs. ExPASy TrEMBL
Match: A0A5D3CFJ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001140 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 2.5e-266
Identity = 461/548 (84.12%), Postives = 498/548 (90.88%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           M WSFS L KSSSS    +IF +P   TSLLSNCR   H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           +FI AC+SLGL  YAFS+FSNKAHPDLRLYNTA+KALS+TSSPINAI LY+RI I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSY+IPFVLKAVV+LSAVEVGRQIH QTVSS LD DVNVATSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           D VDFKDVALWNAMVAGYVK+ EL +ARKVF++MPQRNVISWT LIAGYAQTNRP  AIE
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNI RALEVFENMK KSVITWST+IAA+ALHGLG +AIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYF++MQS+Y+I+P+IEHYGCMIDLLARAGYLQEA KL  DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANA IWGSLLAASNTH+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           K+MRNAGVKKAPGGS IEINNRV+EFLAGD+SDS +H IY VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540

Query: 541 SKFLNYDE 549
           SKFLNYDE
Sbjct: 541 SKFLNYDE 548

BLAST of Carg12922 vs. ExPASy TrEMBL
Match: A0A6J1D0Q9 (pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=3673 GN=LOC111016516 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 6.1e-265
Identity = 454/548 (82.85%), Postives = 504/548 (91.97%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           MRWS S LCKSS   ++ TIF AP A  SLLS+C DPRH+ QIHGFM+ RALDQDNL+LS
Sbjct: 1   MRWSLSILCKSSPFFIQRTIFTAPHAFNSLLSSCCDPRHVPQIHGFMVPRALDQDNLILS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           RFI ACSSL LY YA+SVFS+K +PDLRLYNT +KALSQTSSPI+AISL+SRI  EGL+P
Sbjct: 61  RFIDACSSLRLYTYAYSVFSSKTNPDLRLYNTTIKALSQTSSPIHAISLFSRIRSEGLQP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSY+IPFVLKAVV++S ++VGRQIHTQTV S LDTDVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYSIPFVLKAVVKISTLQVGRQIHTQTVFSALDTDVNVVTSLIQMYSSCGCVSDARKLF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           D V ++DVALWN+MVAGYVKVA+LNSARK+FD+MPQRNVI+WTALIAGYAQ NRPD AI 
Sbjct: 181 DFVPYRDVALWNSMVAGYVKVAKLNSARKLFDEMPQRNVITWTALIAGYAQNNRPDEAIA 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQL++VEPDEIAMLAVLSACADLGALELGEWIHNYI KH LCRIVPLYNALIDMY+
Sbjct: 241 LFRKMQLQEVEPDEIAMLAVLSACADLGALELGEWIHNYIVKHGLCRIVPLYNALIDMYS 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNI RALE+FENMK KSVITWSTMIAA+ALHG GG+AID+FLRMEKARVRPNE+TFIA
Sbjct: 301 KSGNIRRALEIFENMKQKSVITWSTMIAALALHGRGGEAIDIFLRMEKARVRPNEITFIA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVD+GRYYF+RMQS YKI+P+IEHYGCMIDLLARAG+LQEAQK+ +DMP+E
Sbjct: 361 ILSACSHVGMVDMGRYYFDRMQSTYKIKPQIEHYGCMIDLLARAGHLQEAQKVLKDMPFE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANAAIWGSLLAASN HRDA+LAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNIHRDAELAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           KVMRNAGVKKAPGGSFIEINN+V+EFLAGD+SDSQLH I+ VLC  IVQLKMAG   +EW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNKVYEFLAGDKSDSQLHEIFHVLCKTIVQLKMAGLLQDEW 540

Query: 541 SKFLNYDE 549
           SKFL++DE
Sbjct: 541 SKFLDFDE 548

BLAST of Carg12922 vs. ExPASy TrEMBL
Match: A0A5A7UQ55 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001200 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 3.0e-264
Identity = 457/548 (83.39%), Postives = 496/548 (90.51%), Query Frame = 0

Query: 1   MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
           M WSFS L KSSSS    +IF +P   TSLLSNCR   H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 61  RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
           +FI AC+SLGL  YAFS+FSNKAHPDLRLYNTA+KALS+TSSPI+AI LY+RI I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120

Query: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
           DSY+IPFVLKAVV+LSAVEVGRQIH QTVSS LD DVNVATSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
           D V FKDVALWNAMVAGYVK+ EL +ARKVF++MPQRNVISWT LIAGYAQTNRP  AIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
           LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
           KSGNI RALEVFENMK KSVITWST+IAA+ALHGLG +AIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
           ILSACSHVGMVDVGRYYF++MQS+Y+I+P+IEHYGCMIDLLARAGYLQEA KL  DMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
           ANA IWGSLLAASNTH+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
           K+MRNAGVKKAPGGS IEINNRV+EFLAGD+SDS +H +Y VLC II+QLKMAGSY EEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540

Query: 541 SKFLNYDE 549
            KFLNYDE
Sbjct: 541 CKFLNYDE 548

BLAST of Carg12922 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 529.3 bits (1362), Expect = 3.8e-150
Identity = 269/510 (52.75%), Postives = 370/510 (72.55%), Query Frame = 0

Query: 27  LTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPD 86
           +TSL  +  + + + Q H +M+   L++DNL +++FI ACS+ G   YA+SVF+++  P+
Sbjct: 18  VTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPN 77

Query: 87  LRLYNTAVKALSQTSSP---INAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQ 146
             L+NT ++ALS    P     AI++Y ++     +PD++T PFVLK  V++S V  GRQ
Sbjct: 78  TYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ 137

Query: 147 IHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAE 206
           IH Q V  G D+ V+V T LIQMY SCG + DARK+FD +  KDV +WNA++AGY KV E
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197

Query: 207 LNSARKVFDKMP--QRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVL 266
           ++ AR + + MP   RN +SWT +I+GYA++ R   AIE+F++M +E VEPDE+ +LAVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257

Query: 267 SACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVI 326
           SACADLG+LELGE I +Y++   + R V L NA+IDMYAKSGNI +AL+VFE +  ++V+
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317

Query: 327 TWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRM 386
           TW+T+IA +A HG G +A+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+  FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377

Query: 387 QSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADL 446
           +S Y I P IEHYGCMIDLL RAG L+EA ++ + MP++ANAAIWGSLLAASN H D +L
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437

Query: 447 AEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINN 506
            E+AL  L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+  GVKK  G S IE+ N
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497

Query: 507 RVHEFLAGDRSDSQLHGIYPVLCNIIVQLK 532
           RV++F++GD +  Q+  I+ +L  + +Q++
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQ 527

BLAST of Carg12922 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-110
Identity = 192/472 (40.68%), Postives = 307/472 (65.04%), Query Frame = 0

Query: 42  QIHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTS 101
           +I+  ++   L Q + ++++ +  C  +    YA  +F+  ++P++ LYN+ ++A +  S
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87

Query: 102 SPINAISLYSRILIEGLR-PDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVA 161
              + I +Y ++L +    PD +T PF+ K+   L +  +G+Q+H      G    V   
Sbjct: 88  LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147

Query: 162 TSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVI 221
            +LI MY     + DA K+FD +  +DV  WN++++GY ++ ++  A+ +F  M  + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207

Query: 222 SWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYI 281
           SWTA+I+GY        A++ FR+MQL  +EPDEI++++VL +CA LG+LELG+WIH Y 
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 282 EKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAI 341
           E+    +   + NALI+MY+K G I +A+++F  M+ K VI+WSTMI+  A HG    AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327

Query: 342 DMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDL 401
           + F  M++A+V+PN +TF+ +LSACSHVGM   G  YF+ M+  Y+I+P+IEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387

Query: 402 LARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNY 461
           LARAG L+ A ++ + MP + ++ IWGSLL++  T  + D+A  A+ HL +LEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447

Query: 462 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRS 513
            LL+N YA LG+W +   +RK++RN  +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499

BLAST of Carg12922 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 391.0 bits (1003), Expect = 1.6e-108
Identity = 188/497 (37.83%), Postives = 305/497 (61.37%), Query Frame = 0

Query: 43  IHGFMLHRALDQDNLLLSRFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSS 102
           +HG  +  A+  D  + +  IH   S G    A  VF+     D+  +N+ +    Q  S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 103 PINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATS 162
           P  A+ L+ ++  E ++    T+  VL A  ++  +E GRQ+ +    + ++ ++ +A +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 163 LIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISW 222
           ++ MY+ CG + DA++LFD ++ KD   W  M+ GY    +  +AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332

Query: 223 TALIAGYAQTNRPDAAIELFRKMQLEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 282
            ALI+ Y Q  +P+ A+ +F ++QL+K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392

Query: 283 KHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAID 342
           KH +     + +ALI MY+K G++ ++ EVF +++ + V  WS MI  +A+HG G +A+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452

Query: 343 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLL 402
           MF +M++A V+PN VTF  +  ACSH G+VD     F++M+S Y I P  +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512

Query: 403 ARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYT 462
            R+GYL++A K  + MP   + ++WG+LL A   H + +LAE A   L +LEP N G + 
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572

Query: 463 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYP 522
           LLSN YA LG+W     +RK MR  G+KK PG S IEI+  +HEFL+GD +      +Y 
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632

Query: 523 VLCNIIVQLKMAGSYPE 539
            L  ++ +LK  G  PE
Sbjct: 633 KLHEVMEKLKSNGYEPE 649

BLAST of Carg12922 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 389.0 bits (998), Expect = 6.1e-108
Identity = 200/494 (40.49%), Postives = 289/494 (58.50%), Query Frame = 0

Query: 29  SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHAC---SSLGLYLYAFSVFSNKAHP 88
           S L  C     + QIH  ML   L QD+  +++F+  C   +S     YA  VF     P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 89  DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
           D  L+N  ++  S +  P  ++ LY R+L      ++YT P +LKA   LSA E   QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
            Q    G + DV    SLI  Y+  G    A  LFD +   D   WN+++ GYVK  +++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198

Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDEIAMLAVLSACA 268
            A  +F KM ++N ISWT +I+GY Q +    A++LF +MQ   VEPD +++   LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258

Query: 269 DLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWST 328
            LGALE G+WIH+Y+ K  +     L   LIDMYAK G +  ALEVF+N+K KSV  W+ 
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318

Query: 329 MIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVY 388
           +I+  A HG G +AI  F+ M+K  ++PN +TF A+L+ACS+ G+V+ G+  F  M+  Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378

Query: 389 KIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQA 448
            ++P IEHYGC++DLL RAG L EA++  Q+MP + NA IWG+LL A   H++ +L E+ 
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438

Query: 449 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVHE 508
              L  ++P + G Y   +N +A   +W+++   R++M+  GV K PG S I +    HE
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498

Query: 509 FLAGDRSDSQLHGI 520
           FLAGDRS  ++  I
Sbjct: 499 FLAGDRSHPEIEKI 512

BLAST of Carg12922 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 384.4 bits (986), Expect = 1.5e-106
Identity = 217/616 (35.23%), Postives = 318/616 (51.62%), Query Frame = 0

Query: 29  SLLSNCRDPRHIYQIHGFMLHRALDQDNLLLSRFIHACSSLGLY---LYAFSVFSNKAHP 88
           SLL NC+  + +  IH  M+   L   N  LS+ I  C     +    YA SVF     P
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 89  DLRLYNTAVKALSQTSSPINAISLYSRILIEGLRPDSYTIPFVLKAVVQLSAVEVGRQIH 148
           +L ++NT  +  + +S P++A+ LY  ++  GL P+SYT PFVLK+  +  A + G+QIH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 149 TQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLFDLVDFKDVALWNAMVAGYVKVAELN 208
              +  G D D+ V TSLI MY   G + DA K+FD    +DV  + A++ GY     + 
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 209 SARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIELFRKMQLEKVEPDE----------- 268
           +A+K+FD++P ++V+SW A+I+GYA+T     A+ELF+ M    V PDE           
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277

Query: 269 ------------------------------------------------------------ 328
                                                                       
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337

Query: 329 ------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH- 388
                                         + ML++L ACA LGA+++G WIH YI+K  
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397

Query: 389 -SLCRIVPLYNALIDMYAKSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDM 448
             +     L  +LIDMYAK G+I  A +VF ++ HKS+ +W+ MI   A+HG    + D+
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457

Query: 449 FLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLA 508
           F RM K  ++P+++TF+ +LSACSH GM+D+GR+ F  M   YK+ P++EHYGCMIDLL 
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517

Query: 509 RAGYLQEAQKLFQDMPYEANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTL 539
            +G  +EA+++   M  E +  IW SLL A   H + +L E    +L K+EPEN G+Y L
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7023735.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023515616.18.4e-31098.18pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pep... [more]
KAG6590068.13.2e-30897.81Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022987264.17.1e-30897.81pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima][more]
XP_022960640.11.1e-30597.26pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9FMA15.3e-14952.75Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
Q9SIL51.9e-10940.68Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
O823802.3e-10737.83Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9FJY78.6e-10740.49Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9LN012.1e-10535.23Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1JID83.4e-30897.81pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=366... [more]
A0A6J1H9N05.5e-30697.26pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3... [more]
A0A5D3CFJ62.5e-26684.12Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1D0Q96.1e-26582.85pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=... [more]
A0A5A7UQ553.0e-26483.39Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT5G56310.13.8e-15052.75Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20540.11.3e-11040.68mitochondrial editing factor 21 [more]
AT2G29760.11.6e-10837.83Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.16.1e-10840.49Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.11.5e-10635.23Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 356..383
e-value: 0.0027
score: 15.8
coord: 190..218
e-value: 6.0E-4
score: 17.8
coord: 292..318
e-value: 4.4E-6
score: 24.5
coord: 321..355
e-value: 1.6E-4
score: 19.6
coord: 220..254
e-value: 4.6E-8
score: 30.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 161..181
e-value: 0.081
score: 13.2
coord: 393..417
e-value: 2.7E-4
score: 21.0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 318..366
e-value: 1.0E-7
score: 32.1
coord: 217..265
e-value: 4.1E-9
score: 36.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..252
score: 11.860184
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..217
score: 9.371969
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 9.930995
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 86..120
score: 8.506026
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 344..536
e-value: 1.2E-24
score: 89.4
coord: 5..138
e-value: 1.6E-7
score: 33.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 274..343
e-value: 1.3E-7
score: 33.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 139..272
e-value: 1.7E-28
score: 101.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 283..464
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 24..540
NoneNo IPR availablePANTHERPTHR47928:SF80PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 24..540

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12922-RACarg12922-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding