Carg18753 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg18753
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr08: 4044864 .. 4045282 (-)
RNA-Seq ExpressionCarg18753
SyntenyCarg18753
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAATACATCGAAAAATCCGCCGAACACCCATTTCAGATTCAGAAGAATCAGGCGAAATCAGTGGGAGCTTACTTTGATTTTGTAACAGAAAAGCATTTGGGAACGCAAGAAATCAGTGGGGGAGTTATGCTTCGACGCTTGCCTGATAGCTACGGTACGTGTTTGTATTGGGTGCTTTTTCGTTCGTGTCATAGGCTGATTAAACACGAATTCCAAGCATAGAAAATTCCAATACAGAATCCCTTTTTGGTTCCTTTATTCGTTTTCGTCGTCGTGGTCGTCGTCTTTAATGGGTTATGCGATGGCGTGATGTTGACTTGAAGAAGGCTCTAACCCAGAAGGATTTGGTTGATGGAACAGGGGAAGAACAGGGGAAGAAAGGGATCTTAATGCATTCCAATTTGAGCAGTTGA

mRNA sequence

ATGAATGAATACATCGAAAAATCCGCCGAACACCCATTTCAGATTCAGAAGAATCAGGCGAAATCAGTGGGAGCTTACTTTGATTTTGTAACAGAAAAGCATTTGGGAACGCAAGAAATCAGTGGGGGAGTTATGCTTCGACGCTTGCCTGATAGCTACGGGGAAGAACAGGGGAAGAAAGGGATCTTAATGCATTCCAATTTGAGCAGTTGA

Coding sequence (CDS)

ATGAATGAATACATCGAAAAATCCGCCGAACACCCATTTCAGATTCAGAAGAATCAGGCGAAATCAGTGGGAGCTTACTTTGATTTTGTAACAGAAAAGCATTTGGGAACGCAAGAAATCAGTGGGGGAGTTATGCTTCGACGCTTGCCTGATAGCTACGGGGAAGAACAGGGGAAGAAAGGGATCTTAATGCATTCCAATTTGAGCAGTTGA

Protein sequence

MNEYIEKSAEHPFQIQKNQAKSVGAYFDFVTEKHLGTQEISGGVMLRRLPDSYGEEQGKKGILMHSNLSS
Homology
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BLAST of Carg18753 vs. NCBI nr
Match: KAG7025843.1 (hypothetical protein SDJN02_12341, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 4.7e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MNEYIEKSAEHPFQIQKNQAKSVGAYFDFVTEKHLGTQEISGGVMLRRLPDSYGEEQGKK 60
          MNEYIEKSAEHPFQIQKNQAKSVGAYFDFVTEKHLGTQEISGGVMLRRLPDSYGEEQGKK
Sbjct: 1  MNEYIEKSAEHPFQIQKNQAKSVGAYFDFVTEKHLGTQEISGGVMLRRLPDSYGEEQGKK 60

Query: 61 GILMHSNLSS 71
          GILMHSNLSS
Sbjct: 61 GILMHSNLSS 70

The following BLAST results are available for this feature:
BLAST of Carg18753 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7025843.14.7e-31100.00hypothetical protein SDJN02_12341, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg18753 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg18753 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg18753 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18753-RACarg18753-RAmRNA