Carg07803 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07803
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Anaphase-promoting complex subunit 4
Location	Carg_Chr07: 1241856 .. 1249659 (+)
RNA-Seq Expression	Carg07803
Synteny	Carg07803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACATCAACGGTGAGAGAATATGCAGGAGGATTGGTGGCCGTCCGATCCCAAAGCGAGGGCAAGTGAAGATGGGAATCATGGTGGGGATTGTGCACACTGTCACCTCCATCTTCTCTCACGGTCACGGTCACGGTCACGGTCACGGTCACAGTAGCAGCCAGAAACGTTTCTCCTAACACTACACAAGAACAGTGGACATAATAGGACAAACATTTGTCGGTGATTTTGAAGTATCTTCCATTGGGAGGAGCAGCAGAAGCCCACCAGCTGATGGAGAGTAGCAAGCATATAGGAAAGATACTGCTGATTCCATCAAAACATGATTGCTCATTAACTTGGTTTGATTGTGTTCTTATTTTTCCGTTACTTGTATGTGCTTGTGGTGTCTGGTCAACCATTAATGAGAGCTGTGCTTGGCTTAATATGTATATACATTAATGAATAAGATCATGGAATTGAAGGGTTCTAATTAGATGTATTCTTTTTAAATCATGCTTTTAATGATACACATGAAGTTGTAAGTATTAATTATATAAAATAGAAGATGGAGATCAAAGTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCGTGTAACTTCCTTTTTAATTTACATTTTCATTTTTAGAAAGCTTGGTGAATCTGTCGCTTCATTTCTGTTGGCCGGACTGGAACTGAACTCAGTACTGCCGCTTTCGTCCTCTGAGGCTTCTACTTCTCGGCCTCTCTTTCTCTCTCTCGCTCTCTCGCTCTTCACCAATATTACTTCAGCTTCTGAAGGCTTTTCCATTTCAGATCAAGCTATGGAAGCCGACGAGGCCGACTGTGTCTTTCCATTTCAGCTCCAATTCGACAAGCCTATTGCATCTCAGGTTTATTTTTCTCTCTTCAACATCCGCCTCCTTAGTTGCGCGTACATTTCTTTATTTTTTGGGGAACGATGCTTCTAGTATTTGTTTGTGGTGATCCATGAGTGAGTTGTTTTCGTTGAACTAAAAAAACAGAGAGAGTTGTTTTCTGCTCTGAATATTTCATGATTTGCTAATGGAAGGTTAAAATTGCCGAGTGGAAACCGGAAAGGATTTGCTAGCCATGGTCACAGAAGACTTGGGAGTTTTGCTCCACCGTGGCGGAGGTTGCGGACTATATCACCTGGTGAGTTATATGTCTCCTTGATTTCCTCAGCCTAATTTTTTGATTTCCTAAACTTTTTGAAAGAAAGTTAATCTAACTGGCTTTCTTCCTGTTTTGAGTTTCTCGCTGCTTTATCATAGTTGTTTGACCTGATGAATTGCATCTAATATAATGTTGAAGCTAGAAATTTTTTGTTATAACGTAATGCATAGGTTAAGTAGATCAATATAAGATTGTTAATTGTTAAAACTGAATCCTAACGAAGGGCAGTATTTCCTCATTTAAAAGGCCATTTTTAAGTTATGTAATGATAGCTTAGTGATTCTTGAACTATTGGTGTTTTTGAACAATTTTGGTTCACCAAAACGTAATACATACAACAGGAGAACAATATTGACTCTTCCTCTTTAGGACGTTATGTTTAGCACTCGGTTATTGGGTTTTGATGTTCTATGTTGTTGTGCACCGACATCCATGGCTATGAGTGATTGCATAAATTTTATGTAGGAAGGTCTATGAAATTGTTATATTGGAGTCCTGATGGTAGGTGATAGCAGTTCGACTTGACGATGGGACAGTTTCGTTGCATGATGTTGAAGATTTATTTGATATAATAAAGAGTGTTACATATTACTTGGAATTTCCTATAAAGATTGTTACAAGGCTTGTTTGATAGTTGATATCAGGATACTTGGATCTAGCATGGAACCCTAGATTACTGGCCAAGAAATGGCAGAGATATAGAACCAGCGGTGGAAGTGAAGGCTCTGCCCCAATGGCTGGCTGAGACATATTTATATTCTATCGCTAAAACTTAAAGAAAACCGAGGACATTTTTTGTAATGGTTATGCGCAGAAGGCAGATCTCATTAGCAACATTTGGGTCCTTGATGAGTCGGCTAAAAGGTCCTTAGATCTAGGTTTGTGATCGGCAATATTACCTAAGATTTTGGAAGGATCGATTACAAGGTCCTTAGTATTTTGAGTTAGCTTCCCCAGATTACTTGAGCTGTGCCTTGGTTAGTATGCTATAAGGTGGTTGAGTGTGGGATTGCCAGTGTTCCCTTGATGTTTGTTTGGACGAGTATCTAAATGATTGTGAAACGTTGGAAAATTTAACATTCTCTATAAGTGGGTAGCTTTGATTCCAAGGTCGTCAAATGAACCCCAACTGGTGTTTACTTAAATATAATGGAGAGGCCATGGAAAAGTTATTCTTCAAATGTCCTTTCTTCAATTTGGCATAAACTTTTGAAGGTCTTAAAACTATATATTAAAAAGGCAAGTAAGAATTTTGGCCTAAAGTGCTAAGTTGCATTGAGCTGTCCCTGTTATAGCTCCTCTCCCTTTCATAGACTTTATTTTTTCTAAACCTCCCCCCACCAGTCCCAAAGGATGAAAAACTATGTGCATCTAAGTTTTATTCTCTTAGTTAGCTCTCTCTAGTGAGTTTCCCTGTAACGGTGTGCATTTATTTAATGATCGCTAATTGTAGAAGTATATCTCCCCCATTCATTCTTGTGGGACCACCACTAATAAACTTCAAAATTTTCCGTCCTATCATAGCTACAAATAAACGAAAGTACTATTATGGAAATTTTATTGACACAAGTCGAATGTTTAGTAAGCGAAGATGAAATTGTCTTAAAATTTGTGTTTTTACACGTTCTTATATACAAAAGATGATACCATCTTTGAATTCCCCCGTGATCTTGATTGGAGTTCTATTGATCAACTCCCTCTAGGTTGCTTTCACCGAAAAAGAGGGGAAGGCGATACAGCTCCTAAGCTCCGACAAAACTCAAGGACCGAATAGTTTTTTACCTCATAGATTTTTTTAAAAATGTTGGAACATTCAGAGAGCCAATATCATGAGAGTATTCCTATATATATATTTAAATGGAGTTATCAATGGAAACCTAAGCGAACATACGTATGTTTGATCTCAAAGAAAATACTTACACTGTTGTAGACTTTCACCCCATAAATCTTACGGCTGGACTATATCAAAATGTCTTCAACTCTATATATATTTAAATGGAGTTATCAATGGAAACCTATGTATGATCTCAAATAAAATACTTACACTGTTGTAGACTTTCACCCCATGAAGTCTTACGGCTGGACTATATCAAAATGTCTTCAAACAGCTTTTGTAGAGGGATGGCAGATCCTCGATGCATCCCTCGTGGCAATTGGGAAAGGAAAGAAAGAAACAAAAAGGTGTAGTTGTCAAACTTGTCTTGGAAAAGGCCATCAATTAAATCAATTGGACTTTCCTTGAAAATATTCTTGTAGCAAAAGGCTTTGACTCAAAATGGCTGATGTGGATAGAAGGATGCATCTCATCCACAAATTTCTCCACCATCATAAATGGAAGACCTAGAGGAAGATGTATGCCTCATGGAGTCTTCAACAAGGGGATCCACCATCCCCTTTTCTTTTCATAATGGTAATGGATTGCCTCAGTCGCCCATTCACTAAAGTCGAATATGAAGGACAAACGAAGAGCTTTTAAATTGGCAACGAAAGCTTAAACATCAACCACCTTTAGTTCGCAGACGATGCAATCCTCTTTTCTAATATGTCAGATGTCTCTTCCATAAACAACATAATCAAAACGATAAAAACCTTTGAAAGATTCTCTGGACAAAATATCGATATTAAAAAAATAAAGATTGTGGGTATAAACATTAGCACAAAGATTTTGAATTTGCCAGCAAATACAGTTGTAAAGAGAGCGAAGGACCAAATATGTACCTAAGTTACCCTTAGAAGGAAATCACAAATCCTTTTTCCCGTAGAAGACTATTATTGAAAAAATGAAAAGGTTATCAACATGTTCATCCTGTTATACTTCAAAATAGGGAAGAGTAACCCTAATACAAGCTACACTATCCAACCTCCCCACTTACGGCATGTCTCTACTCAAAATGCCACAAAAAGTGGCTACGGATTTAGAAAGATTGTTCAGAAACTATTTGTGGAAAGATAACCCACACCTTGTTCGATGAAATATCATAAACTTCACAGCTGAAAAGGGCGGACTTGGTCTATTTTTGATAAAGGAGAAGAAAAAAAGCTCTCCTCACAAAATGGATATGGAGATATCATCACAAAGAAATGCCTTGAGGGAGAAAACTTAGAAAAACTAAATATTTGAAATTTGGTAGGAATTTGAAGGATTTTGGTAGGAATTTAAAGGATAATGAAGCAACTGAGTGGGCCGAATTAAGCCTTGACCTTGCCCATGTGGTATTGTCAAACAAAGAAGACTCACTAACTTGGCTCCCCGATGGGGTCTTTTCTACAAAATCCTTGAGGATGGACATGGGGAAAAAGTAGAAGCAATAAATCCCACGCTAGCAAAGACAATATGGAAAGGACATCAACCTAAAAAGGTGAAGTTCTTCCTTTGGGAAATAGGAGCCATTAGCACAAGTGAAAATCTTCAAAAAAGAATGTCTTATATCACTCTCTCTCCAAATTGGTGTCCATTATGCTAGAAAGAAAACGAATCACAAAGTCACTTGTTTATGCAATGCACATATGCTCAATTTCTGGACAACGATTCTCAATATGTTTGGATGGCATCTCACATCTCCTAGGGAGGTATAAGGATTTTTTGGATATGGCTTTACCGTACCACCCTTTCAAGAATGCAAAAGCCCTATTATGGAAAAACCTCATCATGGCTTTATTTTGGAATAGGTGGAAAGAAAGAAATCAGAGAATATTTGCAGAAAAGACACAGACCTACACAAAACTTTTCGACAATGTTGTTTACCAAGCTACACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAATTTGGAAGGTCTTTTGTAAAAACCGTGGATTATACATCTCTCTTGTAAATTTCACTCATAAATGAAATTGCTAATGCAAAAATCGACCCCTCCATCTTCTGCAAAGGGACCATGGAAGTATGTTAGTGAAAGAGGAATTGATTGAATGAGTGAAAGAGGGATTGATTGAATGATTGATGAGATGATTGAATTAGGAAGAGCAAGAATGCTCCATATTTATATAGAGAATACAAAAGATATTCAGAAAATCTACTTAAAAATAGGCAGAAAATCTGGTAACAATGGAGTAAACAAATCAAAATAAAATCTAATCTAATCAAAACTAAATCAAATAAAAAACTGATCTAACTCCTAACGGAGATTTAATTAGATACTAACTGACAACAATAGATTTAATTAGATACTAACTGACAACAATCTAAACAAATACGTGATCTTTAACAAAGTACATAAATAAACATCAAACCTCATCACTAACCGAATTCACCATAGGGTGGGTGATGGGGGTAGCACATCATTCTAAACTGATCCATGGATTGGAAACATCACGCTAGCCATGCGGTATCCACTTTTGTGTGGTATCCACTTTTGTGTAGTCACCCTCATAACAAAAGAGCCACCATCAAAGAAACGTGGAAGGTTGTCAACAAAATTTGGGACCCGAAACTTGGTATGAACCTAAAAGAAAACGAAGCTATAGAATGGGCTAAAGTAAGCCTCAACCTTGCCCCAGTTGTTCATTGACATGGCTTCCTAGCACTAACGAGATCTTCTCTACAAATTTTTTTATGATGGACATAAGGAAAAAAAGTAGAAGTAATAAATAGCACGCTAGCAAAGACAATATGGAAAGGAAATCACCCTAAAAAGATGAAGTTTTTCCTTTGGGAAATAGCTCATAAATCCATCCATACAAGTGAAAATATTAAAAAAAAAAGAATGTCCTACATAACCTTATTTCCAAAATGATGTCCATTATACAAGAAAGAAAGCGAATCACAAATCCACTTATTTAATGCACATATGCTCAGAATTTCTGGACAAAATTCGCAATATCTTCGAATGACATCTCACATTTCCTAGGAAGGTAAAGAATCTATTGAACATGACTTTAACCTACCATCTCTTCAAGAATGTCAAAGCTCTATCTTTTAGACTCATGAAAAGAAAGAAAGAAAATAATATTCGCGGAAAAAACACGGACTTGTACAAAACTCTTCGACAATATTATTTACTGAGTTATATCTTAGTGTAAACTATCTAATATTTGTACTTTCTATAGTTATAGAGATGTTTTGTAAGCATCATAGAAGTAGTAAGAGATTTGGTTGGGATTCAAAGATTGTGAATTTTTATTAAGGACACTTGGTATGGAGTTTCAGCAGATGGACTCTAGGCATTCCCTCTCTTCCATTCAATTGGTCTGTGAGTAGTCTTGCATACTTGACCATTCATAATATGACAAGTTGGAACCACAAAATAACTTTGAGTAGTGGATTATGATCCGGATGGATCCGGTTATGATTTCTTAGAATGTGATGATATCCATTTTCAACATTGAAGCATTGTGAACTGATATAGATTTAAGAGGTTTATTTTCCGTTGGCTGGAATATGTCTTTGGTCATTAAACTCTATCAACCACATTTTCTTTTGGTTCTTACAACTAAAGTTGTTCCACTATAATTTTTATTTTGTAATACATTTGCATCAACCCTCACCTTCAATAATAGCACTGCTATATTTTAACAAACAAGCTTATAGGAAAGTGTGGTGCAATCTGGTGGCCATTTCCCACTTCACGCATCCTCCGATTAACTTATTCGGAATTGGCCACTCGATTGCAACCCTGTACATGAGAAGAAATAGGAAACGATAGCGAGACAGAGGAGTGGACTAGAAAAATTACTTCTGATGGAGAATTTTCTGCCGAATCTAGAAGAGGACTCCAGGTGATGCTTGTTTCTCTTACTTTTGGCATACCAGGTCCCCAGCAGGAAAGAAAGGAATTCTAAGCATCTTCTTGGTGTATCCGCTGCAAGAGAATGGGGTAAAATATTTATTACATTCTTCCCTGTTTCTTGCAAGTTTTTATCCAAGATTTTCTGTGCCCTTTGTTGTTTTAAGCAAGGTATATGGATGTAGAACCTGCAAATGAACGAGAAAATATTGCATCCTTTTGGTGCGAGTGTGGCAATAGATTATGCCGACAGGCATGCATATGTAGTAAAGAGATATATTTCTTAGACAACCCGATTTCTGTCCAATTATAGATTGTGGCGGCATGAGTTTGCAATGAAATGACACGTTTAGAAAAAATGAAAATTGTGAATATATGGTTTTGATGGAAACCTGGGAGTCAAAGCATGCATTGAAGTGTGTACTCGCAATAAACTTGTGATCATTTTTTCACATCAATATTCATGTAATATCCATTTTTCACATCGATATTCATGTAATATTCATCGCAATAAATGAATTTGCATTGAAGTGGATTTTCTTGTTTGAAATTATCCGTTTACTCATATGTACATCTTATATCAAATTGATAACCAACCGATGAAATAACTTCCACAGTTTCAAAGAAGCTTTTCTTATGCCCTTAAGTACAATCTGAAGGACAATACTTTGTGAAGACCTTGTTGTCCCTATTCCCCTTTCAATCCTCGTGTCAAGCTGCTCGTCTTCCAGTGTTCTTCATAGCTGCTCGTCTTCCAGTGTTCTTCATTCGGTGTCGT

mRNA sequence

ATGAACAACATCAACGGTGAGAGAATATGCAGGAGGATTGGTGGCCGTCCGATCCCAAAGCGAGGGCAAGTGAAGATGGGAATCATGGTGGGGATTGTGCACACTGTCACCTCCATCTTCTCTCACGGTCACGGTCACGGTCACGGTCACGGTCACAGTAGCAGCCAGAAACCTTCTGAAGGCTTTTCCATTTCAGATCAAGCTATGGAAGCCGACGAGGCCGACTGTGTCTTTCCATTTCAGCTCCAATTCGACAAGCCTATTGCATCTCAGGTTAAAATTGCCGAGTGGAAACCGGAAAGGATTTGCTAGCCATGGTCACAGAAGACTTGGGAGTTTTGCTCCACCGTGGCGGAGGTTGCGGACTATATCACCTGTTTCAAAGAAGCTTTTCTTATGCCCTTAAGTACAATCTGAAGGACAATACTTTGTGAAGACCTTGTTGTCCCTATTCCCCTTTCAATCCTCGTGTCAAGCTGCTCGTCTTCCAGTGTTCTTCATAGCTGCTCGTCTTCCAGTGTTCTTCATTCGGTGTCGT

Coding sequence (CDS)

ATGAACAACATCAACGGTGAGAGAATATGCAGGAGGATTGGTGGCCGTCCGATCCCAAAGCGAGGGCAAGTGAAGATGGGAATCATGGTGGGGATTGTGCACACTGTCACCTCCATCTTCTCTCACGGTCACGGTCACGGTCACGGTCACGGTCACAGTAGCAGCCAGAAACCTTCTGAAGGCTTTTCCATTTCAGATCAAGCTATGGAAGCCGACGAGGCCGACTGTGTCTTTCCATTTCAGCTCCAATTCGACAAGCCTATTGCATCTCAGGTTAAAATTGCCGAGTGGAAACCGGAAAGGATTTGCTAG

Protein sequence

MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGHGHGHGHGHSSSQKPSEGFSISDQAMEADEADCVFPFQLQFDKPIASQVKIAEWKPERIC

Homology

[Close]

BLAST of Carg07803 vs. NCBI nr
Match: KAG7026593.1 (Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGHGHGHGHGHSSSQKPSE 60
           MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGHGHGHGHGHSSSQKPSE
Sbjct: 1   MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGHGHGHGHGHSSSQKPSE 60

Query: 61  GFSISDQAMEADEADCVFPFQLQFDKPIASQVKIAEWKPERIC 104
           GFSISDQAMEADEADCVFPFQLQFDKPIASQVKIAEWKPERIC
Sbjct: 61  GFSISDQAMEADEADCVFPFQLQFDKPIASQVKIAEWKPERIC 103

[Close]

BLAST of Carg07803 vs. NCBI nr
Match: KAA0052717.1 (hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa] >TYK13107.1 hypothetical protein E5676_scaffold255G007170 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 9.7e-09
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 1  MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGHGHGHGH 51
          MNNING+R+ RRI GR IPKRGQVKMGIMVG+  TVTSIFS+ H     H
Sbjct: 8  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH 57

[Close]

BLAST of Carg07803 vs. NCBI nr
Match: EEF40912.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-06
Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGH 45
          M  ++  ++ RR+ GRPIPKRGQVK+GI+VG+ H+V SIFSH H
Sbjct: 6  MGMMSDRKVSRRLSGRPIPKRGQVKVGIVVGLAHSVASIFSHSH 49

[Close]

BLAST of Carg07803 vs. NCBI nr
Match: KAA0046621.1 (anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 5.9e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 68  AMEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           AME DEA+ V PFQLQFDKPIASQVKIAEW PE+
Sbjct: 64  AMETDEAERVLPFQLQFDKPIASQVKIAEWNPEK 97

[Close]

BLAST of Carg07803 vs. NCBI nr
Match: XP_038894052.1 (anaphase-promoting complex subunit 4 isoform X1 [Benincasa hispida] >XP_038894054.1 anaphase-promoting complex subunit 4 isoform X1 [Benincasa hispida])

HSP 1 Score: 61.2 bits (147), Expect = 5.9e-06
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 69  MEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           ME DEAD V PFQLQFDKPIASQVKIAEW PE+
Sbjct: 1   METDEADRVLPFQLQFDKPIASQVKIAEWNPEK 33

[Close]

BLAST of Carg07803 vs. ExPASy Swiss-Prot
Match: O65418 (Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-05
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 69  MEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           M +DE + + PFQLQFDKPI  Q+KIAEW PE+
Sbjct: 4   MASDEEENIIPFQLQFDKPIPFQIKIAEWNPEK 36

[Close]

BLAST of Carg07803 vs. ExPASy TrEMBL
Match: A0A5A7UDZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007170 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-09
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 1  MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGHGHGHGH 51
          MNNING+R+ RRI GR IPKRGQVKMGIMVG+  TVTSIFS+ H     H
Sbjct: 8  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH 57

[Close]

BLAST of Carg07803 vs. ExPASy TrEMBL
Match: B9S603 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1062910 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06
Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 1  MNNINGERICRRIGGRPIPKRGQVKMGIMVGIVHTVTSIFSHGH 45
          M  ++  ++ RR+ GRPIPKRGQVK+GI+VG+ H+V SIFSH H
Sbjct: 6  MGMMSDRKVSRRLSGRPIPKRGQVKVGIVVGLAHSVASIFSHSH 49

[Close]

BLAST of Carg07803 vs. ExPASy TrEMBL
Match: A0A5D3BMY3 (Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00330 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 68  AMEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           AME DEA+ V PFQLQFDKPIASQVKIAEW PE+
Sbjct: 64  AMETDEAERVLPFQLQFDKPIASQVKIAEWNPEK 97

[Close]

BLAST of Carg07803 vs. ExPASy TrEMBL
Match: A0A5A7TZ68 (Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001730 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 68  AMEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           AME DEA+ V PFQLQFDKPIASQVKIAEW PE+
Sbjct: 64  AMETDEAERVLPFQLQFDKPIASQVKIAEWNPEK 97

[Close]

BLAST of Carg07803 vs. ExPASy TrEMBL
Match: A0A6J1GCS1 (Anaphase-promoting complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111453021 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.3e-06
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 69  MEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           ME DEA+ V PFQLQFDKPIASQVKIAEW PE+
Sbjct: 1   METDEAEHVLPFQLQFDKPIASQVKIAEWNPEK 33

[Close]

BLAST of Carg07803 vs. TAIR 10
Match: AT4G21530.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 7.4e-07
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0


Query: 69  MEADEADCVFPFQLQFDKPIASQVKIAEWKPER 102
           M +DE + + PFQLQFDKPI  Q+KIAEW PE+
Sbjct: 4   MASDEEENIIPFQLQFDKPIPFQIKIAEWNPEK 36

The following BLAST results are available for this feature:

BLAST of Carg07803 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026593.1	1.9e-52	100.00	Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAA0052717.1	9.7e-09	70.00	hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa] >TYK131...	[more]
EEF40912.1	3.5e-06	59.09	conserved hypothetical protein [Ricinus communis]	[more]
KAA0046621.1	5.9e-06	82.35	anaphase-promoting complex subunit 4 [Cucumis melo var. makuwa]	[more]
XP_038894052.1	5.9e-06	84.85	anaphase-promoting complex subunit 4 isoform X1 [Benincasa hispida] >XP_03889405...	[more]

BLAST of Carg07803 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65418	1.0e-05	63.64	Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=...	[more]

BLAST of Carg07803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDZ4	4.7e-09	70.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
B9S603	1.7e-06	59.09	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1062910 PE=4 SV=1	[more]
A0A5D3BMY3	2.9e-06	82.35	Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TZ68	2.9e-06	82.35	Anaphase-promoting complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1GCS1	8.3e-06	81.82	Anaphase-promoting complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC1114530...	[more]

BLAST of Carg07803 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21530.1	7.4e-07	63.64	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..66
None	No IPR available	PANTHER	PTHR36615	PROTEIN, PUTATIVE-RELATED	coord: 3..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07803-RA	Carg07803-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005680	anaphase-promoting complex