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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CATAACTCGACACCATCAACACATTTGCTGTCAGAAATGGACCAATGTCTATCAGAAATAAAGGCAGTGCCAAGGTAGATTGGTACTGACATATAGTTCATTTGAGAGCTTTTTTCTATCTATTTGCAAGCACCGTATCTTTTAATTTGTAGATATGAGTGACAAGGCCTATAGGGCACAAATTGGTTTCATTGATGCATATAGGTTGTGGTAATTTTCAAAAAGAGAGACATCTTTCTATTCACGTAAGTTTTTCGGTTTCTAAACCCTAAAAATTAACCACCATTACCAAAATTAAACTGCTGATTCCATCACCAGTCAATGTTTTTCGGTTACTTGGATATCTTTGATAAATGAGGAATATTGCCTTTTAATTCTTCTGAAGTGAGAACTTTTTTTCTTTTGCCCCTCTATTTTCTTCCCTTGCAGGCTACTGAGGAGAGGTACAAAGACAAAGGTGCATATATTGTTCTATAACATCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCACGACCAAAGGTACGAAGCCATTACTTTGTTTAGAAGATTATTTTCTGAGTTGGCAAATCTTTCCTACTATTTCCTTCACAATTATGGTGGTGAATTTTACTTAAATATATTAAAATCAGATATTTAAATGAGTCATGTGCTTGCATCACAGACTACTTATGGCTTGCCACCATCAACCAATAGCTAAAGAAATCCTAATACATGGATCGGAACGATGTTTTTTAATAATTATAATGATGTAAAAGTTAAAGAGAGAAATTTAAAAAAAAATATTTTTGTTAACATTTGGTCCATAGAACTCAAGGACACAAATGTACAACCTATAGAATAAAACATTTCCAAGAGCTAATACTTATTCTATTCTGTGGGGCCTTTGGTTAGAGAGAAACAATAGGAGATTGAGAGATCTAGTGAAGAGATGTGTTCTCTTGTGGGGTTTTAAGCTTCTCTCTGTAATTATTCTTTTGATCTCATTGTGTTAGATCGGAGTCCCATGGCTTGGGTTGTCTTTTTGTGTGTCTTCTGTATTCACCTTGAGTAGGAGTGAAGCTTTTCAGATGCTCTTAAGGGTAGGAGTTGTCATAGATGGCCTTTGTTGGAGGCGGGGATGTGTTGTCCCATTCCACCTCGCATTTATAGCCCATTTTCTTGTGTTATAATGTAGGAAAAGAAGTGTTGTGCTCTGTCAATCACTTGATAAGGCCACCGAAAATGAAGTTAACCGTTGCCTCTTTATATGCAGGTCAAATGTCATTGATTCCGACGAAGAATTAGATTTGGCAACAATGGCAACAATGGCAACTCATCCATGA mRNA sequence CATAACTCGACACCATCAACACATTTGCTGTCAGAAATGGACCAATGTCTATCAGAAATAAAGGCAGTGCCAAGGCTACTGAGGAGAGGTACAAAGACAAAGGTGCATATATTGTTCTATAACATCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCACGACCAAAGGTCAAATGTCATTGATTCCGACGAAGAATTAGATTTGGCAACAATGGCAACAATGGCAACTCATCCATGA Coding sequence (CDS) ATGGACCAATGTCTATCAGAAATAAAGGCAGTGCCAAGGCTACTGAGGAGAGGTACAAAGACAAAGGTGCATATATTGTTCTATAACATCCGAATTTTGATGTTCCAATCATACATAGTTTTGAAGCCATTACTCCACGACCAAAGGTCAAATGTCATTGATTCCGACGAAGAATTAGATTTGGCAACAATGGCAACAATGGCAACTCATCCATGA Protein sequence MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRSNVIDSDEELDLATMATMATHP
Homology
BLAST of Carg01164 vs. NCBI nr
Match: KAG7027840.1 (hypothetical protein SDJN02_09017 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.1 bits (357), Expect = 1.8e-30 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRSNVIDSDEELD 60
MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRSNVIDSDEELD
Sbjct: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRSNVIDSDEELD 60
Query: 61 LATMATMATHP 72
LATMATMATHP
Sbjct: 61 LATMATMATHP 71
BLAST of Carg01164 vs. NCBI nr
Match: KAG6596291.1 (hypothetical protein SDJN03_09471, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26 Identity = 71/97 (73.20%), Postives = 71/97 (73.20%), Query Frame = 0
Query: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQ------------ 60
MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQ
Sbjct: 1 MDQCLSEIKAVPRLLRRGTKTKVHILFYNIRILMFQSYIVLKPLLHDQRKRSVVLCQSLD 60
Query: 61 --------------RSNVIDSDEELDLATMATMATHP 72
RSNVIDSDEELDLATMATMATHP
Sbjct: 61 KATENEVNRCLFICRSNVIDSDEELDLATMATMATHP 97
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7027840.1 | 1.8e-30 | 100.00 | hypothetical protein SDJN02_09017 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| KAG6596291.1 | 3.5e-26 | 73.20 | hypothetical protein SDJN03_09471, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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