Carg00443 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGAACGAACCACCGCCGCCGCCTCCGCTAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTTGATTTTAGTTCCTTGTTTTGTCTTTACGATTTCTCGTGGAAAGATTGTACGTGAAGTGCTATTGGACGTCTTCTGTAGTTTTGTTTTGTTCTTTTGGTTGATGGAGACGAGTTTGTTTTGAGAAATCAGTCACCTGGCTTGGCTGTGAATGATTTTATTTGATCATCGTTTGTTTTCCTGGCCTATTTGTACGGTAAAATTGCCAGTGAATCTGTATCGGAATGAAATAAATTATTCTAACATGAATTCGTACCAGTTTGATAGTTTCTCCTTGTTGATTCAAGCTTTTGAAATTTTGTTGATGTAGGACCGTATATAATTAATTAATCTTAATTTCCAGGAATCGCATCCTGTTTTTGTTTCTTTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGATAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGGTAAGGTTTCTAGGTCTAGAATGGGGACCAAAGTAGCGTATTACTGCCAATTTCTTTACTCGTATCGTATGTGGAGGGATTGCAGCATCTCATTTTTGTGACACACTTTATCTCTCTCTCTCGTAAAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATACGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAATTACGTTTCCTTTCCTTTCACATATTTATGGTTATCGTTTCTCATTTTCATATTCATTTATTTCTGGTTGGTTGAATCATTGAATTGCCAATAGGTTTGATCAAATTCATCGCTGTTTTATCTGGAAGTATTGATTTTCTTCCATTATATTTTGAATCTTTTCTTAGAATTTGCTAGTCTATTACTCATCTTTCAATATTCCTTTTGTTGAAACAAAACATAAAATTCAATACTCATAGAGGTAGACATTTTTAAATTCAAGTATCAATTAAACTTGCTTGAACATCATAATCTATTACACCTTTACTGATTATAAATTGTGTATTTCTGATCAATTAATTTAATACAACATGAGGAGATCAAATGTACCAAGATATAGTATAATGTCGATGGACTTAAGCA ATGCAGGAACGAACCACCGCCGCCGCCTCCGCTAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTTGATTTTAGTTCCTTGTTTTGTCTTTACGATTTCTCGTGGAAAGATTGAATCGCATCCTGTTTTTGTTTCTTTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGATAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATACGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAATTACGTTTCCTTTCCTTTCACATATTTATGGTTATCGTTTCTCATTTTCATATTCATTTATTTCTGGTTGGTTGAATCATTGAATTGCCAATAGGTTTGATCAAATTCATCGCTGTTTTATCTGGAAGTATTGATTTTCTTCCATTATATTTTGAATCTTTTCTTAGAATTTGCTAGTCTATTACTCATCTTTCAATATTCCTTTTGTTGAAACAAAACATAAAATTCAATACTCATAGAGGTAGACATTTTTAAATTCAAGTATCAATTAAACTTGCTTGAACATCATAATCTATTACACCTTTACTGATTATAAATTGTGTATTTCTGATCAATTAATTTAATACAACATGAGGAGATCAAATGTACCAAGATATAGTATAATGTCGATGGACTTAAGCA ATGCAGGAACGAACCACCGCCGCCGCCTCCGCTAGTCGTACGCGATCGAGCAGCGAAAGATCGTCGAGTTCCGCGTTTCTACTTGATGTTAAAGAAGGTTTGATTTTAGTTCCTTGTTTTGTCTTTACGATTTCTCGTGGAAAGATTGAATCGCATCCTGTTTTTGTTTCTTTGAGGGAGAATTACGTTATGATTTGTTTCTTTACCGAAGATATAGGAGTGGGAAGTGATGAGGAGGAGATAAGCAGAGTGCCGCAGATCTGCGGCAACTCTGCCTCTGCTGCCGGCGGCACTTCAGCATCTGGTAAAGCCCCTGCATCAGATGGCGTAAGGAGCAGAGGACGAAGCTCCGCTGACAAAGAAAGTAAAAGGCTTAAGAGATTGTTAAGAAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAAAAGGCGTATTTGGGCGACTTGGAAATACGAGCAGCAAACTTGTTGAAAAGGAACTCCGAGCTTGAAGAGAATCTGTCCACGTTACAAAATGAGAATCAGATGCTTAGACACGTACGTCAACCAACCCCCCTCGCTTCCATTTTCTTGTTTTTAAACATTGCATGTTAA MQERTTAAASASRTRSSSERSSSSAFLLDVKEGLILVPCFVFTISRGKIESHPVFVSLRENYVMICFFTEDIGVGSDEEEISRVPQICGNSASAAGGTSASGKAPASDGVRSRGRSSADKESKRLKRLLRNRVSAQQARERKKAYLGDLEIRAANLLKRNSELEENLSTLQNENQMLRHVRQPTPLASIFLFLNIAC Homology
BLAST of Carg00443 vs. NCBI nr
Match: KAG7031785.1 (Transcription factor HY5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 358.2 bits (918), Expect = 4.5e-95 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg00443 vs. NCBI nr
Match: KAG6608147.1 (hypothetical protein SDJN03_01489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 242.3 bits (617), Expect = 3.6e-60 Identity = 132/137 (96.35%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Carg00443 vs. NCBI nr
Match: XP_022981220.1 (transcription factor HY5-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 226.5 bits (576), Expect = 2.0e-55 Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0
BLAST of Carg00443 vs. NCBI nr
Match: XP_022940419.1 (transcription factor HY5-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 226.5 bits (576), Expect = 2.0e-55 Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0
BLAST of Carg00443 vs. NCBI nr
Match: XP_022981221.1 (transcription factor HY5-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 221.9 bits (564), Expect = 5.0e-54 Identity = 139/184 (75.54%), Postives = 141/184 (76.63%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: Q9SM50 (Transcription factor HY5 OS=Solanum lycopersicum OX=4081 GN=HY5 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.0e-26 Identity = 92/190 (48.42%), Postives = 110/190 (57.89%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: O24646 (Transcription factor HY5 OS=Arabidopsis thaliana OX=3702 GN=HY5 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23 Identity = 87/192 (45.31%), Postives = 107/192 (55.73%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: Q8W191 (Transcription factor HY5-like OS=Arabidopsis thaliana OX=3702 GN=HYH PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 6.9e-14 Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy Swiss-Prot
Match: Q54RZ9 (Probable basic-leucine zipper transcription factor G OS=Dictyostelium discoideum OX=44689 GN=bzpG PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.4e-04 Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1IYV9 (transcription factor HY5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 9.8e-56 Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1FK24 (transcription factor HY5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446032 PE=3 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 9.8e-56 Identity = 141/184 (76.63%), Postives = 143/184 (77.72%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1IVY4 (transcription factor HY5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480422 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 2.4e-54 Identity = 139/184 (75.54%), Postives = 141/184 (76.63%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1FQI7 (transcription factor HY5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446032 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 2.4e-54 Identity = 139/184 (75.54%), Postives = 141/184 (76.63%), Query Frame = 0
BLAST of Carg00443 vs. ExPASy TrEMBL
Match: A0A6J1CN91 (transcription factor HY5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012541 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 2.9e-39 Identity = 124/192 (64.58%), Postives = 131/192 (68.23%), Query Frame = 0
BLAST of Carg00443 vs. TAIR 10
Match: AT5G11260.1 (Basic-leucine zipper (bZIP) transcription factor family protein ) HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24 Identity = 87/192 (45.31%), Postives = 107/192 (55.73%), Query Frame = 0
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.2 (HY5-homolog ) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-15 Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 0
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.1 (HY5-homolog ) HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14 Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.3 (HY5-homolog ) HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14 Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Carg00443 vs. TAIR 10
Match: AT3G17609.4 (HY5-homolog ) HSP 1 Score: 75.9 bits (185), Expect = 4.1e-14 Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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