Carg13790 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13790
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr03: 4663547 .. 4665043 (+)
RNA-Seq Expression	Carg13790
Synteny	Carg13790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTCAAAGCGGATGCCCATGGCGCCGTTGTTACTCCGGCTGAACAATCCAAGAAAGCCCCATTTCCTCGCGGTGAATTGGATGCCCGCCAACTGTTCGACAAAATGCCTCAATTAAACGTGGTTTCTGCAACCGCTATGATTGGGCGCTGCGCAAGGCAGCATCAGCACGAAGAGGCATTGTGTCTATTTTCTGCAATGTTTGTGTTAAATTTAAGGCCCAATGAGTTCACTTTTGGCACTGTGATTCACTCTGCAACGGCACTCGGAGACATTGATATTGGCAAGCAACTTCATGCTTGTGCCATAAAAATAGGCCTTCACTCTAATGTGTTTGTTGGTAGTGCGGCTTTGGATTTGTATGTCAAGTTGAGTGTCATTGAGGAAGCTCAAAGGGCTTTTGATGATATCAAGATGCCTAATGTGGTTTCTTACACTAGTTTGATTTCTGGGTACTTGAAAACAGAGAAGATTCAAGATGCGCTCCGGGTGTTCGATGAAATGCCCGAGCGAAACATCGTGTCCTGGAATGCTATGATTGGCGGGTTTAGCCAAAAGGGACACAATGAAGATGCTGTACATCTCTTCATTGATATGCTCAGAGAAGGGTTTTTGCCCACTCAATCTACTTTTCCTTGTGCTTTATGTGCTGCTGCTAATATAGCTTCCATTGGAATAGGGAGGAGTTTTCATGCTTGTGCTATCAAGTTCTTGGGCGATCTCGACGTGTTCGTGAGCAATTCGCTTATTAGTTTTTATGCAAAATGTGGAAGTATGGAAGATAGTTTGTTGGTTTTCAATAAATTGCTTGACAAAAGAAATACAGTTTCATGGAACGCTGTCCTTTGTGGTTATGCTCAAAATGGTAGGGGAAAGGAAGCCATAGATTTCTACCAGAGGATGAGTTTTTCAGGCTGCAAACCCAATGGAGTGACACTTCTTAGCTTGTTATGGGCTTGTAATCATGCTGGCCTAGTTGATGAAGGTTATTCATATTTCAATCAGGCGAAACTCGAGAACCCCAGCTTGTTAAAACCCGAGCATTATGCTTGTATGGTCGATTTGCTCTCACGTTCAGGTCAGTTTAGACGAGCAGAGGAGTTTATACACGACCTACCCTTCGATCCAGGGATTGGGTTTTGGAAAGCATTGCTTGGGGGCTGCCAAATTCACTCGAATATGGAACTTGGGGAGCTTGCAGCTCAAAGAATCCTGGCCTTGGATCCAAGTGATGTCTCGTCGTATGTAATGATGTCGAACGCGCATTCAGCAGCCGGGAAATGGCATAGCGTGTCGATATTAAGAAGGGAAATGAAGGAGAAGGGGATGAAGAGAATTCCGGGTTGCAGTTGGATTGAAATTAGAAGCAAAGTTCATGTCTTTGTAACTGGTGACAAAAATCACCACCAAAAGGATGAAATTTGTTCTACCTTGAAATTTTTTGTTGAACACTTGAAAGAGAGTGAAGATTTCAACTTTCTTTCAGATTCATAA

mRNA sequence

ATGAAACTCAAAGCGGATGCCCATGGCGCCGTTGTTACTCCGGCTGAACAATCCAAGAAAGCCCCATTTCCTCGCGGTGAATTGGATGCCCGCCAACTGTTCGACAAAATGCCTCAATTAAACGTGGTTTCTGCAACCGCTATGATTGGGCGCTGCGCAAGGCAGCATCAGCACGAAGAGGCATTGTGTCTATTTTCTGCAATGTTTGTGTTAAATTTAAGGCCCAATGAGTTCACTTTTGGCACTGTGATTCACTCTGCAACGGCACTCGGAGACATTGATATTGGCAAGCAACTTCATGCTTGTGCCATAAAAATAGGCCTTCACTCTAATGTGTTTGTTGGTAGTGCGGCTTTGGATTTGTATGTCAAGTTGAGTGTCATTGAGGAAGCTCAAAGGGCTTTTGATGATATCAAGATGCCTAATGTGGTTTCTTACACTAGTTTGATTTCTGGGTACTTGAAAACAGAGAAGATTCAAGATGCGCTCCGGGTGTTCGATGAAATGCCCGAGCGAAACATCGTGTCCTGGAATGCTATGATTGGCGGGTTTAGCCAAAAGGGACACAATGAAGATGCTGTACATCTCTTCATTGATATGCTCAGAGAAGGGTTTTTGCCCACTCAATCTACTTTTCCTTGTGCTTTATGTGCTGCTGCTAATATAGCTTCCATTGGAATAGGGAGGAGTTTTCATGCTTGTGCTATCAAGTTCTTGGGCGATCTCGACGTGTTCGTGAGCAATTCGCTTATTAGTTTTTATGCAAAATGTGGAAGTATGGAAGATAGTTTGTTGGTTTTCAATAAATTGCTTGACAAAAGAAATACAGTTTCATGGAACGCTGTCCTTTGTGGTTATGCTCAAAATGGTAGGGGAAAGGAAGCCATAGATTTCTACCAGAGGATGAGTTTTTCAGGCTGCAAACCCAATGGAGTGACACTTCTTAGCTTGTTATGGGCTTGTAATCATGCTGGCCTAGTTGATGAAGGTTATTCATATTTCAATCAGGCGAAACTCGAGAACCCCAGCTTGTTAAAACCCGAGCATTATGCTTGTATGGTCGATTTGCTCTCACGTTCAGGTCAGTTTAGACGAGCAGAGGAGTTTATACACGACCTACCCTTCGATCCAGGGATTGGGTTTTGGAAAGCATTGCTTGGGGGCTGCCAAATTCACTCGAATATGGAACTTGGGGAGCTTGCAGCTCAAAGAATCCTGGCCTTGGATCCAAGTGATGTCTCGTCGTATGTAATGATGTCGAACGCGCATTCAGCAGCCGGGAAATGGCATAGCGTGTCGATATTAAGAAGGGAAATGAAGGAGAAGGGGATGAAGAGAATTCCGGGTTGCAGTTGGATTGAAATTAGAAGCAAAGTTCATGTCTTTGTAACTGGTGACAAAAATCACCACCAAAAGGATGAAATTTGTTCTACCTTGAAATTTTTTGTTGAACACTTGAAAGAGAGTGAAGATTTCAACTTTCTTTCAGATTCATAA

Coding sequence (CDS)

ATGAAACTCAAAGCGGATGCCCATGGCGCCGTTGTTACTCCGGCTGAACAATCCAAGAAAGCCCCATTTCCTCGCGGTGAATTGGATGCCCGCCAACTGTTCGACAAAATGCCTCAATTAAACGTGGTTTCTGCAACCGCTATGATTGGGCGCTGCGCAAGGCAGCATCAGCACGAAGAGGCATTGTGTCTATTTTCTGCAATGTTTGTGTTAAATTTAAGGCCCAATGAGTTCACTTTTGGCACTGTGATTCACTCTGCAACGGCACTCGGAGACATTGATATTGGCAAGCAACTTCATGCTTGTGCCATAAAAATAGGCCTTCACTCTAATGTGTTTGTTGGTAGTGCGGCTTTGGATTTGTATGTCAAGTTGAGTGTCATTGAGGAAGCTCAAAGGGCTTTTGATGATATCAAGATGCCTAATGTGGTTTCTTACACTAGTTTGATTTCTGGGTACTTGAAAACAGAGAAGATTCAAGATGCGCTCCGGGTGTTCGATGAAATGCCCGAGCGAAACATCGTGTCCTGGAATGCTATGATTGGCGGGTTTAGCCAAAAGGGACACAATGAAGATGCTGTACATCTCTTCATTGATATGCTCAGAGAAGGGTTTTTGCCCACTCAATCTACTTTTCCTTGTGCTTTATGTGCTGCTGCTAATATAGCTTCCATTGGAATAGGGAGGAGTTTTCATGCTTGTGCTATCAAGTTCTTGGGCGATCTCGACGTGTTCGTGAGCAATTCGCTTATTAGTTTTTATGCAAAATGTGGAAGTATGGAAGATAGTTTGTTGGTTTTCAATAAATTGCTTGACAAAAGAAATACAGTTTCATGGAACGCTGTCCTTTGTGGTTATGCTCAAAATGGTAGGGGAAAGGAAGCCATAGATTTCTACCAGAGGATGAGTTTTTCAGGCTGCAAACCCAATGGAGTGACACTTCTTAGCTTGTTATGGGCTTGTAATCATGCTGGCCTAGTTGATGAAGGTTATTCATATTTCAATCAGGCGAAACTCGAGAACCCCAGCTTGTTAAAACCCGAGCATTATGCTTGTATGGTCGATTTGCTCTCACGTTCAGGTCAGTTTAGACGAGCAGAGGAGTTTATACACGACCTACCCTTCGATCCAGGGATTGGGTTTTGGAAAGCATTGCTTGGGGGCTGCCAAATTCACTCGAATATGGAACTTGGGGAGCTTGCAGCTCAAAGAATCCTGGCCTTGGATCCAAGTGATGTCTCGTCGTATGTAATGATGTCGAACGCGCATTCAGCAGCCGGGAAATGGCATAGCGTGTCGATATTAAGAAGGGAAATGAAGGAGAAGGGGATGAAGAGAATTCCGGGTTGCAGTTGGATTGAAATTAGAAGCAAAGTTCATGTCTTTGTAACTGGTGACAAAAATCACCACCAAAAGGATGAAATTTGTTCTACCTTGAAATTTTTTGTTGAACACTTGAAAGAGAGTGAAGATTTCAACTTTCTTTCAGATTCATAA

Protein sequence

MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESEDFNFLSDS

Homology

[Close]

BLAST of Carg13790 vs. NCBI nr
Match: KAG7033855.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1017.7 bits (2630), Expect = 3.4e-293
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE
Sbjct: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM
Sbjct: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG
Sbjct: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK
Sbjct: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 481 FFVEHLKESEDFNFLSDS 498

[Close]

BLAST of Carg13790 vs. NCBI nr
Match: KAG6603678.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1015.8 bits (2625), Expect = 1.3e-292
Identity = 496/498 (99.60%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE
Sbjct: 18  MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 77

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDID+GKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 78  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDVGKQLHACAIKIGLHSNVFVGSAALD 137

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNA+
Sbjct: 138 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAV 197

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG
Sbjct: 198 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 257

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 258 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 317

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 318 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 377

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 378 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 437

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK
Sbjct: 438 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 497

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 498 FFVEHLKESEDFNFLSDS 515

[Close]

BLAST of Carg13790 vs. NCBI nr
Match: XP_022949636.1 (pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1005.4 bits (2598), Expect = 1.8e-289
Identity = 492/498 (98.80%), Postives = 495/498 (99.40%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           +KLKADA+GAVVTPA QSKKAPFPR ELDARQLFDKMPQLNVVSAT+MIGRCARQHQHEE
Sbjct: 18  IKLKADAYGAVVTPAVQSKKAPFPRSELDARQLFDKMPQLNVVSATSMIGRCARQHQHEE 77

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 78  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 137

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM
Sbjct: 138 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 197

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFSQKGHNEDAVHLFIDML EGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG
Sbjct: 198 IGGFSQKGHNEDAVHLFIDMLTEGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 257

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 258 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 317

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 318 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 377

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 378 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 437

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK
Sbjct: 438 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 497

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 498 FFVEHLKESEDFNFLSDS 515

[Close]

BLAST of Carg13790 vs. NCBI nr
Match: XP_022977247.1 (pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 998.0 bits (2579), Expect = 2.8e-287
Identity = 489/498 (98.19%), Postives = 493/498 (99.00%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           +KLKADAHGAVVTPA QSKK PFPRGELDARQLFDKMPQLNVVSATAMIG CARQHQHEE
Sbjct: 18  IKLKADAHGAVVTPAVQSKKDPFPRGELDARQLFDKMPQLNVVSATAMIGCCARQHQHEE 77

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 78  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 137

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQ ALRVFD+MPERNIVSWNAM
Sbjct: 138 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQAALRVFDKMPERNIVSWNAM 197

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG
Sbjct: 198 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 257

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 258 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 317

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 318 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 377

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQF+RAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 378 GQFKRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 437

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIE RSKVHVFVTGDK+HHQKDEICSTLK
Sbjct: 438 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIESRSKVHVFVTGDKSHHQKDEICSTLK 497

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 498 FFVEHLKESEDFNFLSDS 515

[Close]

BLAST of Carg13790 vs. NCBI nr
Match: XP_023544385.1 (pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 995.0 bits (2571), Expect = 2.4e-286
Identity = 487/498 (97.79%), Postives = 491/498 (98.59%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           +KLKADAHGAVVTPAEQSKK PFPRGELDARQLFDKMPQ+NVVSATAMIGRCARQHQHEE
Sbjct: 17  IKLKADAHGAVVTPAEQSKKPPFPRGELDARQLFDKMPQINVVSATAMIGRCARQHQHEE 76

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           AL LFSAMFVLNLRPNEFTFGTVIHSATAL DIDIGKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 77  ALGLFSAMFVLNLRPNEFTFGTVIHSATALRDIDIGKQLHACAIKIGLHSNVFVGSAALD 136

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDA RVFDEMPERNIVSWNAM
Sbjct: 137 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDAFRVFDEMPERNIVSWNAM 196

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFS+KGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHAC IKFLG
Sbjct: 197 IGGFSRKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACGIKFLG 256

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 257 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 316

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 317 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 376

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQFR+AEEFI DLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 377 GQFRQAEEFIRDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 436

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           N HSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK
Sbjct: 437 NVHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 496

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 497 FFVEHLKESEDFNFLSDS 514

[Close]

BLAST of Carg13790 vs. ExPASy Swiss-Prot
Match: Q9FIH2 (Pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E102 PE=2 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 5.3e-164
Identity = 279/468 (59.62%), Postives = 365/468 (77.99%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           +A ++FD++P+L+V+SATA+IGR  ++ +H EA   F  +  L +RPNEFTFGTVI S+T
Sbjct: 45  NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
              D+ +GKQLH  A+K+GL SNVFVGSA L+ YVKLS + +A+R FDD + PNVVS T+
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREG-FLP 208
           LISGYLK  + ++AL +F  MPER++V+WNA+IGGFSQ G NE+AV+ F+DMLREG  +P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224

Query: 209 TQSTFPCALCAAANIASIGIGRSFHACAIKFLGD-LDVFVSNSLISFYAKCGSMEDSLLV 268
            +STFPCA+ A +NIAS G G+S HACAIKFLG   +VFV NSLISFY+KCG+MEDSLL 
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284

Query: 269 FNKL-LDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRM-SFSGCKPNGVTLLSLLWACNHA 328
           FNKL  ++RN VSWN+++ GYA NGRG+EA+  +++M   +  +PN VT+L +L+ACNHA
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344

Query: 329 GLVDEGYSYFNQA--KLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFW 388
           GL+ EGY YFN+A    ++P+LL+ EHYACMVD+LSRSG+F+ AEE I  +P DPGIGFW
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFW 404

Query: 389 KALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEK 448
           KALLGGCQIHSN  L +LAA +IL LDP DVSSYVM+SNA+SA   W +VS++RR+MKE 
Sbjct: 405 KALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKET 464

Query: 449 GMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESE 491
           G+KR  GCSWIE+R ++ VFV  DKN+  KDE+   L    +HL+E+E
Sbjct: 465 GLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENE 512

[Close]

BLAST of Carg13790 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 3.0e-98
Identity = 178/470 (37.87%), Postives = 286/470 (60.85%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           DA+++FD+M   NVVS  ++I    +     EAL +F  M    + P+E T  +VI +  
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264

Query: 89  ALGDIDIGKQLHACAIKIG-LHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYT 148
           +L  I +G+++H   +K   L +++ + +A +D+Y K S I+EA+  FD + + NV++ T
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324

Query: 149 SLISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLP 208
           S+ISGY      + A  +F +M ERN+VSWNA+I G++Q G NE+A+ LF  + RE   P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384

Query: 209 TQSTFPCALCAAANIASIGIGRSFHACAIKF------LGDLDVFVSNSLISFYAKCGSME 268
           T  +F   L A A++A + +G   H   +K         + D+FV NSLI  Y KCG +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444

Query: 269 DSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWAC 328
           +  LVF K+++ R+ VSWNA++ G+AQNG G EA++ ++ M  SG KP+ +T++ +L AC
Sbjct: 445 EGYLVFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 504

Query: 329 NHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGF 388
            HAG V+EG  YF+    +       +HY CMVDLL R+G    A+  I ++P  P    
Sbjct: 505 GHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVI 564

Query: 389 WKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKE 448
           W +LL  C++H N+ LG+  A+++L ++PS+   YV++SN ++  GKW  V  +R+ M++
Sbjct: 565 WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRK 624

Query: 449 KGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESED 492
           +G+ + PGCSWI+I+   HVF+  DK+H +K +I S L   +  ++  +D
Sbjct: 625 EGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQD 673

[Close]

BLAST of Carg13790 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.3e-93
Identity = 170/458 (37.12%), Postives = 271/458 (59.17%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           DA QLFD+MPQ NV+S T MI   ++   H++AL L   M   N+RPN +T+ +V+ S  
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
            + D+   + LH   IK GL S+VFV SA +D++ KL                       
Sbjct: 174 GMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLG---------------------- 233

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPT 208
                    + +DAL VFDEM   + + WN++IGGF+Q   ++ A+ LF  M R GF+  
Sbjct: 234 ---------EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 293

Query: 209 QSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFN 268
           Q+T    L A   +A + +G   H   +K+  D D+ ++N+L+  Y KCGS+ED+L VFN
Sbjct: 294 QATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFN 353

Query: 269 KLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVD 328
           + + +R+ ++W+ ++ G AQNG  +EA+  ++RM  SG KPN +T++ +L+AC+HAGL++
Sbjct: 354 Q-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 413

Query: 329 EGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALLGG 388
           +G+ YF   K         EHY CM+DLL ++G+   A + ++++  +P    W+ LLG 
Sbjct: 414 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 473

Query: 389 CQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKRIP 448
           C++  NM L E AA++++ALDP D  +Y ++SN ++ + KW SV  +R  M+++G+K+ P
Sbjct: 474 CRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 533

Query: 449 GCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHL 487
           GCSWIE+  ++H F+ GD +H Q  E+   L   +  L
Sbjct: 534 GCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534

[Close]

BLAST of Carg13790 vs. ExPASy Swiss-Prot
Match: Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 340.5 bits (872), Expect = 3.2e-92
Identity = 175/468 (37.39%), Postives = 278/468 (59.40%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           +A ++FD+M + + VS  A+I    +  +  E L LF +M    + P+EFTFG+++ + T
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
             G +  G ++H+  +K G+ SN  VG + +D+Y K  +IEEA++          VS T 
Sbjct: 495 G-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT- 554

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPT 208
                     +++  ++ ++  +   VSWN++I G+  K  +EDA  LF  M+  G  P 
Sbjct: 555 ----------MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 614

Query: 209 QSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFN 268
           + T+   L   AN+AS G+G+  HA  IK     DV++ ++L+  Y+KCG + DS L+F 
Sbjct: 615 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 674

Query: 269 KLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVD 328
           K L +R+ V+WNA++CGYA +G+G+EAI  ++RM     KPN VT +S+L AC H GL+D
Sbjct: 675 KSL-RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 734

Query: 329 EGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALLGG 388
           +G  YF   K +     +  HY+ MVD+L +SG+ +RA E I ++PF+     W+ LLG 
Sbjct: 735 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 794

Query: 389 CQIH-SNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKRI 448
           C IH +N+E+ E A   +L LDP D S+Y ++SN ++ AG W  VS LRR M+   +K+ 
Sbjct: 795 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 854

Query: 449 PGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESEDFNFL 496
           PGCSW+E++ ++HVF+ GDK H + +EI   L      +K  +D +F+
Sbjct: 855 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFV 889

[Close]

BLAST of Carg13790 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-90
Identity = 173/462 (37.45%), Postives = 266/462 (57.58%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           +AR++F+KMPQ + V+ T +I   ++  +  +AL  F+ M      PNEFT  +VI +A 
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
           A      G QLH   +K G  SNV VGSA LDLY +  ++++AQ                
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ---------------- 232

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPT 208
                           VFD +  RN VSWNA+I G +++   E A+ LF  MLR+GF P+
Sbjct: 233 ---------------LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 292

Query: 209 QSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFN 268
             ++     A ++   +  G+  HA  IK    L  F  N+L+  YAK GS+ D+  +F+
Sbjct: 293 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 352

Query: 269 KLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVD 328
           +L  KR+ VSWN++L  YAQ+G GKEA+ +++ M   G +PN ++ LS+L AC+H+GL+D
Sbjct: 353 RLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 412

Query: 329 EGYSYFNQAKLENPSLLKPE--HYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALL 388
           EG+ Y+   K +    + PE  HY  +VDLL R+G   RA  FI ++P +P    WKALL
Sbjct: 413 EGWHYYELMKKDG---IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 472

Query: 389 GGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKR 448
             C++H N ELG  AA+ +  LDP D   +V++ N +++ G+W+  + +R++MKE G+K+
Sbjct: 473 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 532

Query: 449 IPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKE 489
            P CSW+EI + +H+FV  D+ H Q++EI    +  +  +KE
Sbjct: 533 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539

[Close]

BLAST of Carg13790 vs. ExPASy TrEMBL
Match: A0A6J1GCJ3 (pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452968 PE=4 SV=1)

HSP 1 Score: 1005.4 bits (2598), Expect = 8.5e-290
Identity = 492/498 (98.80%), Postives = 495/498 (99.40%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           +KLKADA+GAVVTPA QSKKAPFPR ELDARQLFDKMPQLNVVSAT+MIGRCARQHQHEE
Sbjct: 18  IKLKADAYGAVVTPAVQSKKAPFPRSELDARQLFDKMPQLNVVSATSMIGRCARQHQHEE 77

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 78  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 137

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM
Sbjct: 138 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 197

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFSQKGHNEDAVHLFIDML EGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG
Sbjct: 198 IGGFSQKGHNEDAVHLFIDMLTEGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 257

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 258 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 317

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 318 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 377

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 378 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 437

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK
Sbjct: 438 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 497

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 498 FFVEHLKESEDFNFLSDS 515

[Close]

BLAST of Carg13790 vs. ExPASy TrEMBL
Match: A0A6J1IHX7 (pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111477616 PE=4 SV=1)

HSP 1 Score: 998.0 bits (2579), Expect = 1.4e-287
Identity = 489/498 (98.19%), Postives = 493/498 (99.00%), Query Frame = 0


Query: 1   MKLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEE 60
           +KLKADAHGAVVTPA QSKK PFPRGELDARQLFDKMPQLNVVSATAMIG CARQHQHEE
Sbjct: 18  IKLKADAHGAVVTPAVQSKKDPFPRGELDARQLFDKMPQLNVVSATAMIGCCARQHQHEE 77

Query: 61  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 120
           ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD
Sbjct: 78  ALCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALD 137

Query: 121 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAM 180
           LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQ ALRVFD+MPERNIVSWNAM
Sbjct: 138 LYVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQAALRVFDKMPERNIVSWNAM 197

Query: 181 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 240
           IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG
Sbjct: 198 IGGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLG 257

Query: 241 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 300
           DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ
Sbjct: 258 DLDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQ 317

Query: 301 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 360
           RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS
Sbjct: 318 RMSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRS 377

Query: 361 GQFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 420
           GQF+RAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS
Sbjct: 378 GQFKRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMS 437

Query: 421 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLK 480
           NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIE RSKVHVFVTGDK+HHQKDEICSTLK
Sbjct: 438 NAHSAAGKWHSVSILRREMKEKGMKRIPGCSWIESRSKVHVFVTGDKSHHQKDEICSTLK 497

Query: 481 FFVEHLKESEDFNFLSDS 499
           FFVEHLKESEDFNFLSDS
Sbjct: 498 FFVEHLKESEDFNFLSDS 515

[Close]

BLAST of Carg13790 vs. ExPASy TrEMBL
Match: A0A0A0KX53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293300 PE=4 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 2.8e-256
Identity = 435/497 (87.53%), Postives = 456/497 (91.75%), Query Frame = 0


Query: 2   KLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEEA 61
           KLK D + AV TP    +   F  G+LDARQL+DKMP LNVVSAT  IGRCARQHQHEEA
Sbjct: 20  KLKPDGNAAVGTPPLPFQATSFSGGQLDARQLYDKMPHLNVVSATTAIGRCARQHQHEEA 79

Query: 62  LCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALDL 121
           L LFSAM VLNLRPNEFTFGTVI S  ALGDI IGKQLH CAIK GLHSNVFVGSA LDL
Sbjct: 80  LSLFSAMLVLNLRPNEFTFGTVIQSPKALGDIHIGKQLHVCAIKTGLHSNVFVGSALLDL 139

Query: 122 YVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAMI 181
           YVK+ VIEEAQRAF+DIKMPNVVSYTSLISGYLK E+I+DALRVFDEMPERN+VSWN+MI
Sbjct: 140 YVKVGVIEEAQRAFEDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMPERNVVSWNSMI 199

Query: 182 GGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLGD 241
           GGFSQKGHNEDAVHLFIDMLREG LPTQSTFPCA+CAAANIASIGIGRSFHACA+KF G 
Sbjct: 200 GGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAANIASIGIGRSFHACAVKFFGK 259

Query: 242 LDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQR 301
           LDVFVSNSLISFYAKCGSMEDSLLVFNKLLD+RN VSWNAVL G+AQNGRGKEAIDFYQR
Sbjct: 260 LDVFVSNSLISFYAKCGSMEDSLLVFNKLLDERNVVSWNAVLSGFAQNGRGKEAIDFYQR 319

Query: 302 MSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRSG 361
           M  +GCKPN VT LSLLWACNHAGLVDEGYSYFNQA+L+NP+LLK EHYACMVDLLSRSG
Sbjct: 320 MILAGCKPNAVTFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSG 379

Query: 362 QFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSN 421
           QF+RAEEFIHDLPFDPGIGFWKALLGGCQIHSN+ELGELAAQRILALDP DVSSYVMMSN
Sbjct: 380 QFKRAEEFIHDLPFDPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSN 439

Query: 422 AHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKF 481
           AHSAAGKWHSVSILRREMKEKG+KRIPGCSWIEIRSKVHVFVTGDKNHHQKDEI S LKF
Sbjct: 440 AHSAAGKWHSVSILRREMKEKGLKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEIYSALKF 499

Query: 482 FVEHLKESEDFNFLSDS 499
           FVEHLKE EDFNFLSDS
Sbjct: 500 FVEHLKEREDFNFLSDS 516

[Close]

BLAST of Carg13790 vs. ExPASy TrEMBL
Match: A0A6J1CRE4 (pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013558 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.2e-251
Identity = 425/493 (86.21%), Postives = 460/493 (93.31%), Query Frame = 0


Query: 6   DAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLF 65
           + HGA+ T   +S   PFPRG+L A Q+FDKMPQLNVVSATA+IGR AR++QHEE LCLF
Sbjct: 20  NGHGAIETLPLKSSNVPFPRGKLYASQMFDKMPQLNVVSATAVIGRHARKNQHEEVLCLF 79

Query: 66  SAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKL 125
           SAMFVLNLRPNEFTFGTVIHSATA+ DIDIGK++HACA KIGLHSNVFVGSA LDLY KL
Sbjct: 80  SAMFVLNLRPNEFTFGTVIHSATAVRDIDIGKEIHACAKKIGLHSNVFVGSALLDLYAKL 139

Query: 126 SVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFS 185
           SVIEE QRAFDDIK+PNVVSYTSLISGYLK E+IQDAL+VFDEMPERNIVSWNAMIGG S
Sbjct: 140 SVIEEVQRAFDDIKIPNVVSYTSLISGYLKMERIQDALQVFDEMPERNIVSWNAMIGGLS 199

Query: 186 QKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVF 245
           QKGHNEDAVHLFIDMLREGFLPTQSTFP A+CAAANIAS+GIGRSFHACA+KFLG LDVF
Sbjct: 200 QKGHNEDAVHLFIDMLREGFLPTQSTFPSAICAAANIASLGIGRSFHACAVKFLGKLDVF 259

Query: 246 VSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFS 305
           V+NSLISFYAKCGSMEDSL++FNKL++ RN VSWNAVLCGYAQNGRGKEAI FY+RMS +
Sbjct: 260 VNNSLISFYAKCGSMEDSLVIFNKLVE-RNIVSWNAVLCGYAQNGRGKEAIGFYERMSSA 319

Query: 306 GCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRR 365
           G KPNGVTLLSLLWACNHAGLVDEGYSYFNQA+L+NP++LKPEHYAC+VDLLSRSGQFRR
Sbjct: 320 GVKPNGVTLLSLLWACNHAGLVDEGYSYFNQARLDNPNMLKPEHYACLVDLLSRSGQFRR 379

Query: 366 AEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSA 425
           AEEFI DLPFDPGIGFWKALLGGCQIHSN+ELGELAAQRILALDP DVSSYVMMSNAHSA
Sbjct: 380 AEEFIRDLPFDPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAHSA 439

Query: 426 AGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEH 485
           AGKW SVS LRREMKEKGMKR+PGCSWIEIRSKV+VFVTGD+NHHQKDEI S ++FFVEH
Sbjct: 440 AGKWQSVSTLRREMKEKGMKRVPGCSWIEIRSKVNVFVTGDRNHHQKDEIYSAMRFFVEH 499

Query: 486 LKESEDFNFLSDS 499
           LKESEDFN LSDS
Sbjct: 500 LKESEDFNLLSDS 511

[Close]

BLAST of Carg13790 vs. ExPASy TrEMBL
Match: A0A5A7U174 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001620 PE=4 SV=1)

HSP 1 Score: 832.0 bits (2148), Expect = 1.3e-237
Identity = 402/482 (83.40%), Postives = 431/482 (89.42%), Query Frame = 0


Query: 2   KLKADAHGAVVTPAEQSKKAPFPRGELDARQLFDKMPQLNVVSATAMIGRCARQHQHEEA 61
           K+K + + AV TP   SK  PF  G+L ARQLFDKMP LNVVSATA IG CARQHQHEEA
Sbjct: 20  KIKPNGNAAVGTPPLGSKTTPFSGGQLAARQLFDKMPHLNVVSATAAIGHCARQHQHEEA 79

Query: 62  LCLFSAMFVLNLRPNEFTFGTVIHSATALGDIDIGKQLHACAIKIGLHSNVFVGSAALDL 121
           L LFSA+ VLNL+PNEFTFGTVIHSA ALGDI  GKQLH CAIK G HS+VFVGSA LDL
Sbjct: 80  LYLFSAILVLNLKPNEFTFGTVIHSAKALGDIQSGKQLHVCAIKTGFHSDVFVGSALLDL 139

Query: 122 YVKLSVIEEAQRAFDDIKMPNVVSYTSLISGYLKTEKIQDALRVFDEMPERNIVSWNAMI 181
           Y KL  IEEA+RAFDDIKMPNVVSYTSLISGYLK E+I DALRVFDEMPERN+VSWN+MI
Sbjct: 140 YFKLGFIEEAERAFDDIKMPNVVSYTSLISGYLKIERIHDALRVFDEMPERNVVSWNSMI 199

Query: 182 GGFSQKGHNEDAVHLFIDMLREGFLPTQSTFPCALCAAANIASIGIGRSFHACAIKFLGD 241
            GFSQKGHNEDAVHLF+DMLREG LPTQSTF CA+CAAANIASIGIGRSFHACA+KF G 
Sbjct: 200 SGFSQKGHNEDAVHLFVDMLREGILPTQSTFTCAICAAANIASIGIGRSFHACAVKFFGK 259

Query: 242 LDVFVSNSLISFYAKCGSMEDSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQR 301
           LDVFVSNSLISFYAKCGSMEDSLLVFNKL ++RN VSWNA+L G+AQNGRGKEAIDFYQR
Sbjct: 260 LDVFVSNSLISFYAKCGSMEDSLLVFNKLRNERNVVSWNAILGGFAQNGRGKEAIDFYQR 319

Query: 302 MSFSGCKPNGVTLLSLLWACNHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRSG 361
           M  +GCKPN VT LSLLWACNHAGLVDEGYSYFNQA+L NP+LLK EHYACMVDLLSRSG
Sbjct: 320 MILAGCKPNDVTFLSLLWACNHAGLVDEGYSYFNQARLINPNLLKAEHYACMVDLLSRSG 379

Query: 362 QFRRAEEFIHDLPFDPGIGFWKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSN 421
           QF+RAEEFIHDLPF+PGIGFWKALLGGCQIHSN+ELGELAAQRILALDP D SSYVMMSN
Sbjct: 380 QFKRAEEFIHDLPFNPGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDFSSYVMMSN 439

Query: 422 AHSAAGKWHSVSILRREMKEKGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKF 481
           AHSAAGKW +VS+ RREMKEKG+KRIPGCSWIEIRSK+HVFV GDKNHHQKDEI STLK 
Sbjct: 440 AHSAAGKWQNVSLARREMKEKGLKRIPGCSWIEIRSKIHVFVNGDKNHHQKDEIYSTLKL 499

Query: 482 FV 484
            +
Sbjct: 500 LL 501

[Close]

BLAST of Carg13790 vs. TAIR 10
Match: AT5G42450.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 578.9 bits (1491), Expect = 3.8e-165
Identity = 279/468 (59.62%), Postives = 365/468 (77.99%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           +A ++FD++P+L+V+SATA+IGR  ++ +H EA   F  +  L +RPNEFTFGTVI S+T
Sbjct: 45  NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
              D+ +GKQLH  A+K+GL SNVFVGSA L+ YVKLS + +A+R FDD + PNVVS T+
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREG-FLP 208
           LISGYLK  + ++AL +F  MPER++V+WNA+IGGFSQ G NE+AV+ F+DMLREG  +P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224

Query: 209 TQSTFPCALCAAANIASIGIGRSFHACAIKFLGD-LDVFVSNSLISFYAKCGSMEDSLLV 268
            +STFPCA+ A +NIAS G G+S HACAIKFLG   +VFV NSLISFY+KCG+MEDSLL 
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284

Query: 269 FNKL-LDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRM-SFSGCKPNGVTLLSLLWACNHA 328
           FNKL  ++RN VSWN+++ GYA NGRG+EA+  +++M   +  +PN VT+L +L+ACNHA
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344

Query: 329 GLVDEGYSYFNQA--KLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFW 388
           GL+ EGY YFN+A    ++P+LL+ EHYACMVD+LSRSG+F+ AEE I  +P DPGIGFW
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFW 404

Query: 389 KALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEK 448
           KALLGGCQIHSN  L +LAA +IL LDP DVSSYVM+SNA+SA   W +VS++RR+MKE 
Sbjct: 405 KALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKET 464

Query: 449 GMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESE 491
           G+KR  GCSWIE+R ++ VFV  DKN+  KDE+   L    +HL+E+E
Sbjct: 465 GLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEENE 512

[Close]

BLAST of Carg13790 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 360.5 bits (924), Expect = 2.1e-99
Identity = 178/470 (37.87%), Postives = 286/470 (60.85%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           DA+++FD+M   NVVS  ++I    +     EAL +F  M    + P+E T  +VI +  
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264

Query: 89  ALGDIDIGKQLHACAIKIG-LHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYT 148
           +L  I +G+++H   +K   L +++ + +A +D+Y K S I+EA+  FD + + NV++ T
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324

Query: 149 SLISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLP 208
           S+ISGY      + A  +F +M ERN+VSWNA+I G++Q G NE+A+ LF  + RE   P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384

Query: 209 TQSTFPCALCAAANIASIGIGRSFHACAIKF------LGDLDVFVSNSLISFYAKCGSME 268
           T  +F   L A A++A + +G   H   +K         + D+FV NSLI  Y KCG +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444

Query: 269 DSLLVFNKLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWAC 328
           +  LVF K+++ R+ VSWNA++ G+AQNG G EA++ ++ M  SG KP+ +T++ +L AC
Sbjct: 445 EGYLVFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 504

Query: 329 NHAGLVDEGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGF 388
            HAG V+EG  YF+    +       +HY CMVDLL R+G    A+  I ++P  P    
Sbjct: 505 GHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVI 564

Query: 389 WKALLGGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKE 448
           W +LL  C++H N+ LG+  A+++L ++PS+   YV++SN ++  GKW  V  +R+ M++
Sbjct: 565 WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRK 624

Query: 449 KGMKRIPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESED 492
           +G+ + PGCSWI+I+   HVF+  DK+H +K +I S L   +  ++  +D
Sbjct: 625 EGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQD 673

[Close]

BLAST of Carg13790 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 345.1 bits (884), Expect = 9.2e-95
Identity = 170/458 (37.12%), Postives = 271/458 (59.17%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           DA QLFD+MPQ NV+S T MI   ++   H++AL L   M   N+RPN +T+ +V+ S  
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
            + D+   + LH   IK GL S+VFV SA +D++ KL                       
Sbjct: 174 GMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLG---------------------- 233

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPT 208
                    + +DAL VFDEM   + + WN++IGGF+Q   ++ A+ LF  M R GF+  
Sbjct: 234 ---------EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 293

Query: 209 QSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFN 268
           Q+T    L A   +A + +G   H   +K+  D D+ ++N+L+  Y KCGS+ED+L VFN
Sbjct: 294 QATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFN 353

Query: 269 KLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVD 328
           + + +R+ ++W+ ++ G AQNG  +EA+  ++RM  SG KPN +T++ +L+AC+HAGL++
Sbjct: 354 Q-MKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 413

Query: 329 EGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALLGG 388
           +G+ YF   K         EHY CM+DLL ++G+   A + ++++  +P    W+ LLG 
Sbjct: 414 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 473

Query: 389 CQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKRIP 448
           C++  NM L E AA++++ALDP D  +Y ++SN ++ + KW SV  +R  M+++G+K+ P
Sbjct: 474 CRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 533

Query: 449 GCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHL 487
           GCSWIE+  ++H F+ GD +H Q  E+   L   +  L
Sbjct: 534 GCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534

[Close]

BLAST of Carg13790 vs. TAIR 10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 340.5 bits (872), Expect = 2.3e-93
Identity = 175/468 (37.39%), Postives = 278/468 (59.40%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           +A ++FD+M + + VS  A+I    +  +  E L LF +M    + P+EFTFG+++ + T
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
             G +  G ++H+  +K G+ SN  VG + +D+Y K  +IEEA++          VS T 
Sbjct: 495 G-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT- 554

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPT 208
                     +++  ++ ++  +   VSWN++I G+  K  +EDA  LF  M+  G  P 
Sbjct: 555 ----------MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 614

Query: 209 QSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFN 268
           + T+   L   AN+AS G+G+  HA  IK     DV++ ++L+  Y+KCG + DS L+F 
Sbjct: 615 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 674

Query: 269 KLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVD 328
           K L +R+ V+WNA++CGYA +G+G+EAI  ++RM     KPN VT +S+L AC H GL+D
Sbjct: 675 KSL-RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 734

Query: 329 EGYSYFNQAKLENPSLLKPEHYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALLGG 388
           +G  YF   K +     +  HY+ MVD+L +SG+ +RA E I ++PF+     W+ LLG 
Sbjct: 735 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 794

Query: 389 CQIH-SNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKRI 448
           C IH +N+E+ E A   +L LDP D S+Y ++SN ++ AG W  VS LRR M+   +K+ 
Sbjct: 795 CTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 854

Query: 449 PGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKESEDFNFL 496
           PGCSW+E++ ++HVF+ GDK H + +EI   L      +K  +D +F+
Sbjct: 855 PGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFV 889

[Close]

BLAST of Carg13790 vs. TAIR 10
Match: AT3G24000.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 334.0 bits (855), Expect = 2.1e-91
Identity = 173/462 (37.45%), Postives = 266/462 (57.58%), Query Frame = 0


Query: 29  DARQLFDKMPQLNVVSATAMIGRCARQHQHEEALCLFSAMFVLNLRPNEFTFGTVIHSAT 88
           +AR++F+KMPQ + V+ T +I   ++  +  +AL  F+ M      PNEFT  +VI +A 
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172

Query: 89  ALGDIDIGKQLHACAIKIGLHSNVFVGSAALDLYVKLSVIEEAQRAFDDIKMPNVVSYTS 148
           A      G QLH   +K G  SNV VGSA LDLY +  ++++AQ                
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ---------------- 232

Query: 149 LISGYLKTEKIQDALRVFDEMPERNIVSWNAMIGGFSQKGHNEDAVHLFIDMLREGFLPT 208
                           VFD +  RN VSWNA+I G +++   E A+ LF  MLR+GF P+
Sbjct: 233 ---------------LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 292

Query: 209 QSTFPCALCAAANIASIGIGRSFHACAIKFLGDLDVFVSNSLISFYAKCGSMEDSLLVFN 268
             ++     A ++   +  G+  HA  IK    L  F  N+L+  YAK GS+ D+  +F+
Sbjct: 293 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 352

Query: 269 KLLDKRNTVSWNAVLCGYAQNGRGKEAIDFYQRMSFSGCKPNGVTLLSLLWACNHAGLVD 328
           +L  KR+ VSWN++L  YAQ+G GKEA+ +++ M   G +PN ++ LS+L AC+H+GL+D
Sbjct: 353 RLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD 412

Query: 329 EGYSYFNQAKLENPSLLKPE--HYACMVDLLSRSGQFRRAEEFIHDLPFDPGIGFWKALL 388
           EG+ Y+   K +    + PE  HY  +VDLL R+G   RA  FI ++P +P    WKALL
Sbjct: 413 EGWHYYELMKKDG---IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 472

Query: 389 GGCQIHSNMELGELAAQRILALDPSDVSSYVMMSNAHSAAGKWHSVSILRREMKEKGMKR 448
             C++H N ELG  AA+ +  LDP D   +V++ N +++ G+W+  + +R++MKE G+K+
Sbjct: 473 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 532

Query: 449 IPGCSWIEIRSKVHVFVTGDKNHHQKDEICSTLKFFVEHLKE 489
            P CSW+EI + +H+FV  D+ H Q++EI    +  +  +KE
Sbjct: 533 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539

The following BLAST results are available for this feature:

BLAST of Carg13790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033855.1	3.4e-293	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6603678.1	1.3e-292	99.60	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022949636.1	1.8e-289	98.80	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucur...	[more]
XP_022977247.1	2.8e-287	98.19	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucur...	[more]
XP_023544385.1	2.4e-286	97.79	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucur...	[more]

BLAST of Carg13790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIH2	5.3e-164	59.62	Pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Arabidop...	[more]
Q9SIT7	3.0e-98	37.87	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SI53	1.3e-93	37.12	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]
Q9FWA6	3.2e-92	37.39	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]
Q9LIQ7	3.0e-90	37.45	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]

BLAST of Carg13790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCJ3	8.5e-290	98.80	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like OS=Cuc...	[more]
A0A6J1IHX7	1.4e-287	98.19	pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like OS=Cuc...	[more]
A0A0A0KX53	2.8e-256	87.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293300 PE=4 SV=1	[more]
A0A6J1CRE4	1.2e-251	86.21	pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Momordic...	[more]
A0A5A7U174	1.3e-237	83.40	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg13790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42450.1	3.8e-165	59.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G13600.1	2.1e-99	37.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03880.1	9.2e-95	37.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G02330.1	2.3e-93	37.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G24000.1	2.1e-91	37.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 345..484 e-value: 5.5E-7 score: 31.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 27..127 e-value: 7.1E-14 score: 53.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 239..344 e-value: 2.8E-22 score: 81.5 coord: 128..233 e-value: 1.1E-21 score: 79.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 249..437
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 274..320 e-value: 1.4E-10 score: 41.2 coord: 41..86 e-value: 3.8E-8 score: 33.4 coord: 172..213 e-value: 1.9E-10 score: 40.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 175..208 e-value: 3.0E-5 score: 21.9 coord: 144..175 e-value: 1.5E-7 score: 29.2 coord: 277..310 e-value: 1.6E-9 score: 35.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 248..273 e-value: 0.012 score: 15.8 coord: 415..444 e-value: 0.64 score: 10.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 140..169 e-value: 8.3E-7 score: 28.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 173..207 score: 12.178061
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 142..172 score: 10.807899
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 8.571795
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 41..75 score: 8.736214
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 275..309 score: 12.528824
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR47926:SF288	OS01G0839400 PROTEIN	coord: 28..488
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 28..488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13790-RA	Carg13790-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding