Carg08891 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08891
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Spc97 / Spc98 family of spindle pole body (SBP) component
Location	Carg_Chr02: 9335217 .. 9338546 (-)
RNA-Seq Expression	Carg08891
Synteny	Carg08891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCTTGTTCGAAACGGAAAACATTGTGTTTTATATATAAACTATACATAAATAGAAACAATTAGACGTTGAAGAAATCAAACGAGTACAAAACGAGGGAGTCCTATCCAACGTCCTGTTGAAAACCTAATTTCTTTGATCAACTCAACTCTGCCCTACTCCCCCGACGAACTCCTCGCCGTCGCTTCGCCGGATTCGAGCCAAGGCGACGGCGCGGGAGGTTTGATTATCAGAATTCAGAGAAAAGAAGCTGAGAGGTACGGACTTAGATTTGCGATTCGCAAAGAAGACGGAGGAATTGAGGAAAATTTTGCGAACGGGAGATAGAAAGAGGTTGCTACGAAGTGGAATTAAAGTGGAGAGTTAGGGCGACTCGAAGTCCTCGCCAAATTAAGGTGAGCACCTGACATTAGGTTTTCTTGTATTACTGTTTGCATTTAGGGAAGGAGATCGGAGGAAGTGAAGGAAAGTTGCTTCTCGTTTTGACCGTTGTTTCCTTTGATGTTTCCTAATGTAGGCTGTTTAACCATTGAAGTTTTCGCGGAATCTATACGTTCCGCACTTTTTCTGGATTAATTTAGTGGAAGATTTCTATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGTAAGTTCCATCTGGAATTTTTTGTATTAGACACCGACTCATTTTATGGTGTAAGCTTTTCTTACAAATATCGAGCATTCTTCTTGTGGTTGTTGAATAGCCACGCGAATTTTTATATTTTTTCCTATGAATTTTATTTGAAAGGATTAATGTCTTTTACTTGATTTTGATAAAAATGGACGACGATCTGTATTAGGATTTCCATGTACTGTCAAATTCAAAGGTACATTCAGTATGAGCTGTTTAGTTCGGATCATATGCTTATTGTTTCTATATATGATGTATGTGGCAGGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTTTAGGTATTTCTACTTTCTGTGCTGTATTTCTTGTATTTGTGTTTCCTCTAATTATCTTATCATTGCTAGAATGCTAGTGTAAACTCTCACCTCTCTAGCATCCCTAGTGTACGGACACCGTGTTGCTTTCTATGTGCTATCTACTATATTAGTTGCTGAACAATTTTGCATTTATGGCACTATCTAACTAATTTTGCATTTACGGCGCTATCCATGCAGGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAGTTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTTGGTACTAACTACAAGTTGCTGCTCTTTATTTGCAAGCATAGCAAAACATCATATTATTATAATTATTATTATTAGTTCAATAACATTTGAGGTGGAGGGATTAATACCTTTGACAACTTTTACAAAAAATGGGGGTTCGTGTCAAATATCTCATTATTTATTGCATTGCTATTTTGTAACTTTTGCATAGATATATTTTCTTTAAAAAAAAAAGATATTTTCAGCCATCATGGTTTCCATATAAACTTGGTACCGATGCATTAGATATCAATGAGATCTTGCCTGTTTCTAATATTTTTTTGACCTTGAATGCCAGAATGGGCGTTCATATCATTAATCTTTCATTCTCTAATTTGAGCTGGTTTCTTTCCATACTAAGTTTCTAAGTTATAGTACTGGATAGGCGTTGCCAAAATCCTTACTAGGTAGTGCACCTAACCTTCACATGACAATGGTAAAATTTGTTCAAGGGGAAAAAATGCAGCATGGAAGACAAGAAAAGCTTGCATATTGGTGTGGTGCTTGCAACATGTCTAATGGTTAAGTTAGCTAGGAGAAATTTAGTTTAGCAAGAACTTTAGGAATTGGAAGAACTTTGGACTTAGTTGGCTTTCCTTCTCCCAATAGAAGAAAGTGATTATATCCCCGGTTTTGTTGATTCTTTCTGGGTTAGGGTAAAAGAGGATTGGAATTATTGGGCGGGACTAGGATCACACGAATCAGGGAATGTCGGACTCGGGTGCTAATAAGGAAACTTGGCTTCTGCCCAAGTTTCTTTTCTTTCTTTTGATTAGTGGCTGTGACCCGACTTTCTTCATGTTTGGCTTGTTTTTCACTGTGTTCCTTGACTTTCATGGTCTTTGTGCTTGTCTGTATGGTCCAATTTTACCTGGAACAACAGACTTTTTTTCTTTTCTCCTTTCTGCCACTTTCCTGTCATGATTGGATTCAGGCCATTTTATTTTCTTAATATTTTTTTATTTATTATTTCAAATGCTATCGCTTGAATTCTTTGCTCTCGTATTGGGTTCTTTTTTTTTTTTTTTTTTTTTTGATAATTAGAAGAGAAATGAAGGAAAACAAAAACAACTGCATTTACCTTGTTGTTTTCATAAAGCCTTATTCATATAAACTTTCATGGTTACGCTGATGCATTAGATACGTTGTAAATCAATAAGATGACGCCTGTTCGAAATGTTTTTGCTTTGCACTCCATGTTGTTATACTTTCACTCTCTAATTAGAGCTGGTTTCTTTTCTTTCCGTGTTTCTGAAACACAGTAGTAGATAGTAGTTTTGACGGAATAATTTACTTTTTCCTGGCCTACATCTTTTTATTTTTTGCTACCTTCCTTCATTGTATGAATTTGGTTCATTCCATTTTATTTTCTATAATATTTATAGATTTACTAATTGAAATGCCATCACTTAAATTCTTAATCTAAATAACTTCTGTGTTGTGCTTTTAAGTTAGTGCTATTTTTCCCAATTTGTAAAGCCAACTTGAATCTCATATCTCTCATCTTTTTCCCCCCTCCCTCTCTCCCTTTTCTAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGAATTAGAAAATGGCAGAAGTAGACACAGATTCATGGAGGTTGTCTTGGCCTAACTGATGGAACAATGCAGCTCCCACATTGCGAGACTTGGCGGTAATCCTGCAGCCATGATCACGCAAACAATTTTGTTAGCCTTTATTGTAATTGTTGTTGCGTCAAATTGTGTATTGTCCATCATGGCGTCAATCAGTAATCAGGTTCCACTATTGTTGTATTATTTCTATTTTGTTATAGTGTATGAAGCAAAGGAACCATTACAAATAAGTC

mRNA sequence

ACACCTTGTTCGAAACGGAAAACATTGTGTTTTATATATAAACTATACATAAATAGAAACAATTAGACGTTGAAGAAATCAAACGAGTACAAAACGAGGGAGTCCTATCCAACGTCCTGTTGAAAACCTAATTTCTTTGATCAACTCAACTCTGCCCTACTCCCCCGACGAACTCCTCGCCGTCGCTTCGCCGGATTCGAGCCAAGGCGACGGCGCGGGAGGTTTGATTATCAGAATTCAGAGAAAAGAAGCTGAGAGGTACGGACTTAGATTTGCGATTCGCAAAGAAGACGGAGGAATTGAGGAAAATTTTGCGAACGGGAGATAGAAAGAGGTTGCTACGAAGTGGAATTAAAGTGGAGAGTTAGGGCGACTCGAAGTCCTCGCCAAATTAAGGCTGTTTAACCATTGAAGTTTTCGCGGAATCTATACGTTCCGCACTTTTTCTGGATTAATTTAGTGGAAGATTTCTATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTTTAGGTATTTCTACTTTCTGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAGTTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGAATTAGAAAATGGCAGAAGTAGACACAGATTCATGGAGGTTGTCTTGGCCTAACTGATGGAACAATGCAGCTCCCACATTGCGAGACTTGGCGGTAATCCTGCAGCCATGATCACGCAAACAATTTTGTTAGCCTTTATTGTAATTGTTGTTGCGTCAAATTGTGTATTGTCCATCATGGCGTCAATCAGTAATCAGGTTCCACTATTGTTGTATTATTTCTATTTTGTTATAGTGTATGAAGCAAAGGAACCATTACAAATAAGTC

Coding sequence (CDS)

ATGGAAGAGGCGAAAGAAATTTTGAAGGATAACAGAATTGAAGATATCAGTTGGCTTTGCTCGTTATCTGAATCAGAGCTTGACTTTCTGATTAGCATTAAAATGCTAGTTCTCCAGCGAGCAAAAGTAATTGGCCATGAAGATCTAGCTGAGAAATTTGATCTGAAGACACTACGTGCTTTAGGTATTTCTACTTTCTGGTTTATTTTGATGGAGCATCTTAAAGGACAACTTAGTGTGTCAGGTGTCCCAGATCAGTCTCAATTTTCTGCCTTAAATGGGTCCAACTTATTAGACAGCAGTCTTGAGAAAGTTTTGTCAATTGATGATATAATGGCAAGCATCTGTTCTGAAAGAAGGAAGAAACCTGGAAAAAGGTCGCGGCCGAAGGCTGATTCTAGACCAAAGAAGAAGTTGTGA

Protein sequence

MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRALGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERRKKPGKRSRPKADSRPKKKL

Homology

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BLAST of Carg08891 vs. NCBI nr
Match: KAG7036244.1 (hypothetical protein SDJN02_03046 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.8 bits (673), Expect = 8.1e-67
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR
Sbjct: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRPKKKL
Sbjct: 121 KKPGKRSRPKADSRPKKKL 139

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BLAST of Carg08891 vs. NCBI nr
Match: KAG6606306.1 (hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61
Identity = 134/139 (96.40%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           LG     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR
Sbjct: 61  LG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRPKKKL
Sbjct: 121 KKPGKRSRPKADSRPKKKL 134

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BLAST of Carg08891 vs. NCBI nr
Match: XP_023533769.1 (uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 5.1e-61
Identity = 132/139 (94.96%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           +G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEK+LSIDDIMASICSERR
Sbjct: 61  IG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRPKKKL
Sbjct: 121 KKPGKRSRPKADSRPKKKL 134

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BLAST of Carg08891 vs. NCBI nr
Match: XP_022931147.1 (uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 uncharacterized protein LOC111437414 [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60
Identity = 132/139 (94.96%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           +G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASIC ERR
Sbjct: 61  IG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRPKKKL
Sbjct: 121 KKPGKRSRPKADSRPKKKL 134

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BLAST of Carg08891 vs. NCBI nr
Match: XP_022995750.1 (uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharacterized protein LOC111491189 [Cucurbita maxima])

HSP 1 Score: 241.9 bits (616), Expect = 3.3e-60
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           LG     FILMEHLKGQLSVS VPDQSQFSALNGSNLLDSSLEK+LSIDDIMASICSERR
Sbjct: 61  LG-----FILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRP+KKL
Sbjct: 121 KKPGKRSRPKADSRPRKKL 134

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BLAST of Carg08891 vs. ExPASy TrEMBL
Match: A0A6J1ESQ9 (uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC111437414 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.2e-61
Identity = 132/139 (94.96%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           +G     FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASIC ERR
Sbjct: 61  IG-----FILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICCERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRPKKKL
Sbjct: 121 KKPGKRSRPKADSRPKKKL 134

[Close]

BLAST of Carg08891 vs. ExPASy TrEMBL
Match: A0A6J1K2S6 (uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 131/139 (94.24%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           LG     FILMEHLKGQLSVS VPDQSQFSALNGSNLLDSSLEK+LSIDDIMASICSERR
Sbjct: 61  LG-----FILMEHLKGQLSVSSVPDQSQFSALNGSNLLDSSLEKILSIDDIMASICSERR 120

Query: 121 KKPGKRSRPKADSRPKKKL 140
           KKPGKRSRPKADSRP+KKL
Sbjct: 121 KKPGKRSRPKADSRPRKKL 134

[Close]

BLAST of Carg08891 vs. ExPASy TrEMBL
Match: A0A6J1DR49 (uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023068 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.2e-49
Identity = 111/138 (80.43%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEAKEILKDNRIED+SWLCSLSESELD LISIKMLVLQRAK+IGHE LAEKFDLKTLRA
Sbjct: 1   MEEAKEILKDNRIEDVSWLCSLSESELDMLISIKMLVLQRAKMIGHEALAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           +G     F LMEHLKGQL  S VPDQSQ +ALNG NLLD SLEK+LSID+IMAS+CS+RR
Sbjct: 61  IG-----FALMEHLKGQLRASDVPDQSQSAALNGCNLLDCSLEKILSIDEIMASVCSDRR 120

Query: 121 KKPGKRSRPKADSRPKKK 139
           KKPGKR R KADSR K +
Sbjct: 121 KKPGKRPRQKADSRQKNE 133

[Close]

BLAST of Carg08891 vs. ExPASy TrEMBL
Match: A0A1S3BQH9 (uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 98/128 (76.56%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRA
Sbjct: 1   MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 60

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           +G     F+LMEHLKG+L  S V D SQ + LN  NLLDS++EK+LSID+IMASICS+RR
Sbjct: 61  IG-----FVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRR 120

Query: 121 KKPGKRSR 129
           KKPGKR R
Sbjct: 121 KKPGKRPR 123

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BLAST of Carg08891 vs. ExPASy TrEMBL
Match: A0A5A7UQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001160 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.3e-43
Identity = 97/128 (75.78%), Postives = 110/128 (85.94%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEEA EILK+NR+EDISWLCSLSESELD LISIKMLVLQRAK IGHE+LAEKFDLKTLRA
Sbjct: 60  MEEANEILKNNRVEDISWLCSLSESELDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRA 119

Query: 61  LGISTFWFILMEHLKGQLSVSGVPDQSQFSALNGSNLLDSSLEKVLSIDDIMASICSERR 120
           +G     F+LMEHLKG+L  S V D SQ + LN  NLLDS++EK+LSID+IMASICS+RR
Sbjct: 120 IG-----FVLMEHLKGELRTSDVSDLSQSATLNACNLLDSNVEKILSIDEIMASICSDRR 179

Query: 121 KKPGKRSR 129
           KKPGKR +
Sbjct: 180 KKPGKRGK 182

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BLAST of Carg08891 vs. TAIR 10
Match: AT1G80245.1 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-24
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  LGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSLEKVLSIDDIMASICS 120
           LG+     +LMEH +   Q   S  P    Q   L+  NLL + ++  + I++I+  IC 
Sbjct: 61  LGL-----VLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICD 120

Query: 121 ERRKKPGKRSR 129
            + KK  ++ R
Sbjct: 121 NKSKKKARKRR 126

[Close]

BLAST of Carg08891 vs. TAIR 10
Match: AT1G80245.2 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-24
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  LGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSLEKVLSIDDIMASICS 120
           LG+     +LMEH +   Q   S  P    Q   L+  NLL + ++  + I++I+  IC 
Sbjct: 61  LGL-----VLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICD 120

Query: 121 ERRKKPGKRSR 129
            + KK  ++ R
Sbjct: 121 NKSKKKARKRR 126

[Close]

BLAST of Carg08891 vs. TAIR 10
Match: AT1G80245.3 (Spc97 / Spc98 family of spindle pole body (SBP) component )

HSP 1 Score: 109.0 bits (271), Expect = 3.1e-24
Identity = 60/131 (45.80%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDLAEKFDLKTLRA 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K L +QRAK+ GH++LA+KFDLK LR+
Sbjct: 1   MEELTQILKNNRTDDLTWFCSLSESELDLLISLKKLAIQRAKISGHQELADKFDLKLLRS 60

Query: 61  LGISTFWFILMEHLKG--QLSVSGVPD-QSQFSALNGSNLLDSSLEKVLSIDDIMASICS 120
           LG+     +LMEH +   Q   S  P    Q   L+  NLL + ++  + I++I+  IC 
Sbjct: 61  LGL-----VLMEHARKRVQNDTSLAPSVVHQLRLLDNCNLLKTHVDDAVDIEEILTQICD 120

Query: 121 ERRKKPGKRSR 129
            + KK  ++ R
Sbjct: 121 NKSKKKARKRR 126

[Close]

BLAST of Carg08891 vs. TAIR 10
Match: AT4G00695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23
Identity = 64/133 (48.12%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLR 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  ALGISTFWFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSSLEKVLSIDDIMASIC 120
           +LG+     +LME+++ ++    S  P   Q  S L+  NLL + ++  + I++I+  IC
Sbjct: 61  SLGL-----VLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDIC 120

Query: 121 SER-RKKPGKRSR 129
           +++ +KK  KRSR
Sbjct: 121 NKKSKKKTRKRSR 128

[Close]

BLAST of Carg08891 vs. TAIR 10
Match: AT4G00695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23
Identity = 64/133 (48.12%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MEEAKEILKDNRIEDISWLCSLSESELDFLISIKMLVLQRAKVIGHEDL-AEKFDLKTLR 60
           MEE  +ILK+NR +D++W CSLSESELD LIS+K LV++RAKV G EDL A+KFDLK LR
Sbjct: 1   MEELSQILKNNRTDDLTWFCSLSESELDLLISLKKLVIRRAKVSGLEDLVADKFDLKMLR 60

Query: 61  ALGISTFWFILMEHLKGQL--SVSGVPDQSQ-FSALNGSNLLDSSLEKVLSIDDIMASIC 120
           +LG+     +LME+++ ++    S  P   Q  S L+  NLL + ++  + I++I+  IC
Sbjct: 61  SLGL-----VLMEYVRKRVEDDTSLAPSVVQELSLLDSCNLLKTHVDDTVDIEEILTDIC 120

Query: 121 SER-RKKPGKRSR 129
           +++ +KK  KRSR
Sbjct: 121 NKKSKKKTRKRSR 128

The following BLAST results are available for this feature:

BLAST of Carg08891 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036244.1	8.1e-67	100.00	hypothetical protein SDJN02_03046 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606306.1	2.3e-61	96.40	hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023533769.1	5.1e-61	94.96	uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]	[more]
XP_022931147.1	1.5e-60	94.96	uncharacterized protein LOC111437414 [Cucurbita moschata] >XP_022931148.1 unchar...	[more]
XP_022995750.1	3.3e-60	94.24	uncharacterized protein LOC111491189 [Cucurbita maxima] >XP_022995751.1 uncharac...	[more]

BLAST of Carg08891 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg08891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESQ9	7.2e-61	94.96	uncharacterized protein LOC111437414 OS=Cucurbita moschata OX=3662 GN=LOC1114374...	[more]
A0A6J1K2S6	1.6e-60	94.24	uncharacterized protein LOC111491189 OS=Cucurbita maxima OX=3661 GN=LOC111491189...	[more]
A0A6J1DR49	2.2e-49	80.43	uncharacterized protein LOC111023068 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A1S3BQH9	1.4e-43	76.56	uncharacterized protein LOC103492413 OS=Cucumis melo OX=3656 GN=LOC103492413 PE=...	[more]
A0A5A7UQA1	2.3e-43	75.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Carg08891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80245.1	3.1e-24	45.80	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.2	3.1e-24	45.80	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT1G80245.3	3.1e-24	45.80	Spc97 / Spc98 family of spindle pole body (SBP) component	[more]
AT4G00695.1	7.7e-23	48.12	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]
AT4G00695.2	7.7e-23	48.12	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..139
None	No IPR available	PANTHER	PTHR48237	GAMMA-TUBULIN COMPLEX COMPONENT	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08891-RA	Carg08891-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005319	lipid transporter activity