Carg14081 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14081
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribosomal RNA small subunit methyltransferase G
Location	Carg_Chr02: 6189853 .. 6192147 (+)
RNA-Seq Expression	Carg14081
Synteny	Carg14081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTACCCCTCTCTTCCATCTCAATTCCAATTCCAATTCCAATTCCAATTCCATTTCCAATTCTCTTTTCCCATCCATTTCTCTTTCTTCTTCTTTGTCCTTTGCCTCTTCACCCACTTTCTCATTTTTTCTTCTTCCCCCACCTCCTCATCTTTCTTCTTCATTACCCATCTCTTTCCCACATCTAACTTTCCTTTCTTTCCGCCTCTTTCCCCTTCTGGGTTTCTCATTTTTCTTCCTTACCATCTATGAAGAAGATGAAAGGGGCTGCCTCCCAACACCCTTCTGTGTTTGACGATTCCAAGATCAGATTCAAGCATCAGACTCTCCTCCAAGATTATCACGAATTGGAGAAGGTAATTTTTGTTTTCTGCTTCTGCGGATTTCCGGATTTCTTTGTTGTTTCTACCAGATCTTCCTTTTATTTTATTCATATGGGGTTTGATTGTGTTCTTCAGATCTTTTTCTCTGAAATTGATTTGGTTTCTTTCTGTTTTGAATGGAATTTCTGGTCTGGAAGAGGGGAATATGGTTTGATCTAGGAGTTATCAATCGTGAAAATACTAGTTTTTTTTTTCTTTTTTTCTTTTTGGTTTTCTGGGCTAGGCTAATTCATCCTTGTGTCTGAACTGGCTATTTCCTTTGGTTAAAACTCTCGATTTGGTTGCTCAAACAATAATATGAGATAAAAGTTCTGTCGATTCTTTGTGTTGAATTTTAAAATACCTATCTCTAGGCTAAAAGAGGGAAGTTCGTCTATAATTTTCTTCCTATCTGGAAAATTGATGCTTTAGGTTTGCTTCCATTTGTTTATTTTCTTGGTTCTGAGAGATTGATACCCTTAAAACTGCCATGACCTCCTCTAGTGATATCATCTTTAAGTAATTACCAATCAATGAACTTTGGATCATTCTAAACCTACCATTGATTTCCTTGAAGAGTCGAGTCTAGTAGTTTCCTCACTACTTTACAAGTACATGTTCTTGAACACCTGATCTTATTTGTGCGGTGTTCTATTTTGGTTTTGTTTCACGTAAGTCTAATACTTGGACTAGTTGTTGTCTTCACTTTTGTGAAATTTCAAGAGAAATTTGATTCTGGTTATGTAAAATTTGCCACCCCATGTTCTGAGTTTGTGCTGGATAGATCAGTTTAAGACTCGGGAATGTTATGGATGAACAAACAATTGAAAGTACTTCTTGTGTTCTTCCAGGAAACAGAAACTGCTAAGAGGAAATTACAGATGATGAAGCAAAAGAAGATGACCCTGATGGCAGAAGTCCGGTATAATCTTTACATAATTACGTTGTATTTGTGTGGATCTTCATCAGGAGTAACTGAATTGTCCAGAACTAACTATGAGTCTACGTTTCTATTGAAGGTTCTTGAAGAAGAGATACGAGTACCTAATGAAGAACCAGTTGCCAAACGACCATTCAAATGGAAATCCAGTACAGCAGAAGCAACTTAACAAACAAGTGGCTAACAATACTAAGAAGGGGAAGAATGGTTCGAGAAGAAGACCTGCGTTGCACCCCCTCCCGACGATCTCTGATATAAACCAAAAGGAAAGAATCAACCGACGAATTGATATTCCTCCACAGAGTTCTACTCCGATTCCTGTCCTTGACTTGAACCAGAAGGCAAAGACTAGGAAGAAAGCCAATCAACAGAATTCAACACCAGTTTTTGACTTGAACCAGAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGCGAACCATCACTCCATTTTTCGACTTGAACCAAATTTCGGTAATTGACTAGGACTTATTTGACCAACAATTTTATGATATAGCTGAACCCTGCAAACGTAATTTTTACTACAATTTCACCTCTCCTCCTCCCTAACAATCTCTACATTATTTTGGCTCAGATGGAGGAAGAGGAATTGCAGACCCATTACGATACACTGAGAGCTGATGAGCTGAAGAAAAGCCTTCTTCGAGGTGGGAACGATGAGCAGCAAAATGATATCAAGATTTCGGCGTGCAGGACTGTTGGGGATGGTCCAAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTAAGGGTTTGAGCTCATTTTTATCTCTAGTGTCACTTAGAACTACAATTTGGAAGAAGGGCTTCAGGCATCCTAGAAGCCACAGTTAATTGTAATTCCTTCTTTGATTCTGTATTCTTCTATTGTGAAGGGAAAGTAGTATTTGTACATGTTAATACATTTAAAAAAGAATGGTGATGAGATATCGAGAAGAATCAAAGTTGCAAATCCTTC

mRNA sequence

CCCTACCCCTCTCTTCCATCTCAATTCCAATTCCAATTCCAATTCCAATTCCATTTCCAATTCTCTTTTCCCATCCATTTCTCTTTCTTCTTCTTTGTCCTTTGCCTCTTCACCCACTTTCTCATTTTTTCTTCTTCCCCCACCTCCTCATCTTTCTTCTTCATTACCCATCTCTTTCCCACATCTAACTTTCCTTTCTTTCCGCCTCTTTCCCCTTCTGGGTTTCTCATTTTTCTTCCTTACCATCTATGAAGAAGATGAAAGGGGCTGCCTCCCAACACCCTTCTGTGTTTGACGATTCCAAGATCAGATTCAAGCATCAGACTCTCCTCCAAGATTATCACGAATTGGAGAAGGAAACAGAAACTGCTAAGAGGAAATTACAGATGATGAAGCAAAAGAAGATGACCCTGATGGCAGAAGTCCGGTTCTTGAAGAAGAGATACGAGTACCTAATGAAGAACCAGTTGCCAAACGACCATTCAAATGGAAATCCAGTACAGCAGAAGCAACTTAACAAACAAGTGGCTAACAATACTAAGAAGGGGAAGAATGGTTCGAGAAGAAGACCTGCGTTGCACCCCCTCCCGACGATCTCTGATATAAACCAAAAGGAAAGAATCAACCGACGAATTGATATTCCTCCACAGAGTTCTACTCCGATTCCTGTCCTTGACTTGAACCAGAAGGCAAAGACTAGGAAGAAAGCCAATCAACAGAATTCAACACCAGTTTTTGACTTGAACCAGAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGCGAACCATCACTCCATTTTTCGACTTGAACCAAATTTCGATGGAGGAAGAGGAATTGCAGACCCATTACGATACACTGAGAGCTGATGAGCTGAAGAAAAGCCTTCTTCGAGGTGGGAACGATGAGCAGCAAAATGATATCAAGATTTCGGCGTGCAGGACTGTTGGGGATGGTCCAAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTAAGGGTTTGAGCTCATTTTTATCTCTAGTGTCACTTAGAACTACAATTTGGAAGAAGGGCTTCAGGCATCCTAGAAGCCACAGTTAATTGTAATTCCTTCTTTGATTCTGTATTCTTCTATTGTGAAGGGAAAGTAGTATTTGTACATGTTAATACATTTAAAAAAGAATGGTGATGAGATATCGAGAAGAATCAAAGTTGCAAATCCTTC

Coding sequence (CDS)

ATGAAGAAGATGAAAGGGGCTGCCTCCCAACACCCTTCTGTGTTTGACGATTCCAAGATCAGATTCAAGCATCAGACTCTCCTCCAAGATTATCACGAATTGGAGAAGGAAACAGAAACTGCTAAGAGGAAATTACAGATGATGAAGCAAAAGAAGATGACCCTGATGGCAGAAGTCCGGTTCTTGAAGAAGAGATACGAGTACCTAATGAAGAACCAGTTGCCAAACGACCATTCAAATGGAAATCCAGTACAGCAGAAGCAACTTAACAAACAAGTGGCTAACAATACTAAGAAGGGGAAGAATGGTTCGAGAAGAAGACCTGCGTTGCACCCCCTCCCGACGATCTCTGATATAAACCAAAAGGAAAGAATCAACCGACGAATTGATATTCCTCCACAGAGTTCTACTCCGATTCCTGTCCTTGACTTGAACCAGAAGGCAAAGACTAGGAAGAAAGCCAATCAACAGAATTCAACACCAGTTTTTGACTTGAACCAGAAGGAAAGAATGTACAGTGGGAGAGATGCTAGCGAGCGAACCATCACTCCATTTTTCGACTTGAACCAAATTTCGATGGAGGAAGAGGAATTGCAGACCCATTACGATACACTGAGAGCTGATGAGCTGAAGAAAAGCCTTCTTCGAGGTGGGAACGATGAGCAGCAAAATGATATCAAGATTTCGGCGTGCAGGACTGTTGGGGATGGTCCAAGTCGAGCTGGTAAAAGAAAGATTTCATGGCAAGACCAGGTGGCTTTAAGGGTTTGA

Protein sequence

MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDINQKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSRAGKRKISWQDQVALRV

Homology

[Close]

BLAST of Carg14081 vs. NCBI nr
Match: KAG7035686.1 (hypothetical protein SDJN02_02484 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 497.7 bits (1280), Expect = 6.1e-137
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120
           FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN
Sbjct: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120

Query: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180
           QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER
Sbjct: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180

Query: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240
           TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR
Sbjct: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240

Query: 241 AGKRKISWQDQVALRV 257
           AGKRKISWQDQVALRV
Sbjct: 241 AGKRKISWQDQVALRV 256

[Close]

BLAST of Carg14081 vs. NCBI nr
Match: XP_022932147.1 (uncharacterized protein LOC111438466 [Cucurbita moschata])

HSP 1 Score: 494.6 bits (1272), Expect = 5.2e-136
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120
           FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPAL PLPTISDIN
Sbjct: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDIN 120

Query: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180
           QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER
Sbjct: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180

Query: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240
           TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR
Sbjct: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240

Query: 241 AGKRKISWQDQVALRV 257
           AGKRKISWQDQVALRV
Sbjct: 241 AGKRKISWQDQVALRV 256

[Close]

BLAST of Carg14081 vs. NCBI nr
Match: XP_022965187.1 (uncharacterized protein LOC111465117 [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132
Identity = 250/256 (97.66%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120
           FL+KRYEYLMKNQLPNDHSNGNPVQQK  +KQVANNTKKGKNGSRRRPAL PLPTISDIN
Sbjct: 61  FLRKRYEYLMKNQLPNDHSNGNPVQQK--HKQVANNTKKGKNGSRRRPALQPLPTISDIN 120

Query: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180
           QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER
Sbjct: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180

Query: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240
           TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVG+GPSR
Sbjct: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGEGPSR 240

Query: 241 AGKRKISWQDQVALRV 257
           AGKRKISWQDQVALRV
Sbjct: 241 AGKRKISWQDQVALRV 254

[Close]

BLAST of Carg14081 vs. NCBI nr
Match: XP_023531576.1 (uncharacterized protein LOC111793773 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.2 bits (1232), Expect = 2.3e-131
Identity = 250/257 (97.28%), Postives = 254/257 (98.83%), Query Frame = 0


Query: 1   MKKMKGAASQHP-SVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEV 60
           MKKMKGAASQHP SVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTL+AEV
Sbjct: 1   MKKMKGAASQHPSSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLIAEV 60

Query: 61  RFLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDI 120
           RFL+KRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPAL PLPTISDI
Sbjct: 61  RFLRKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDI 120

Query: 121 NQKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASE 180
           NQKERINRRIDIPPQSST IPVLDLNQKAKTRKKANQQNSTPVFDLNQKER+YSGRDASE
Sbjct: 121 NQKERINRRIDIPPQSSTLIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERIYSGRDASE 180

Query: 181 RTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPS 240
           RTITPFFDLNQISMEEEELQT+YDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPS
Sbjct: 181 RTITPFFDLNQISMEEEELQTNYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPS 240

Query: 241 RAGKRKISWQDQVALRV 257
           RAGKRKISWQDQVALRV
Sbjct: 241 RAGKRKISWQDQVALRV 257

[Close]

BLAST of Carg14081 vs. NCBI nr
Match: KAG6587817.1 (hypothetical protein SDJN03_16382, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.5 bits (1207), Expect = 1.8e-128
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120
           FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN
Sbjct: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120

Query: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180
           QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER
Sbjct: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180

Query: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240
           TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR
Sbjct: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240

Query: 241 AG 243
           AG
Sbjct: 241 AG 242

[Close]

BLAST of Carg14081 vs. ExPASy TrEMBL
Match: A0A6J1EVU7 (uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC111438466 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.5e-136
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120
           FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPAL PLPTISDIN
Sbjct: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALQPLPTISDIN 120

Query: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180
           QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER
Sbjct: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180

Query: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240
           TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR
Sbjct: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240

Query: 241 AGKRKISWQDQVALRV 257
           AGKRKISWQDQVALRV
Sbjct: 241 AGKRKISWQDQVALRV 256

[Close]

BLAST of Carg14081 vs. ExPASy TrEMBL
Match: A0A6J1HJN9 (uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 250/256 (97.66%), Postives = 253/256 (98.83%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQLPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDIN 120
           FL+KRYEYLMKNQLPNDHSNGNPVQQK  +KQVANNTKKGKNGSRRRPAL PLPTISDIN
Sbjct: 61  FLRKRYEYLMKNQLPNDHSNGNPVQQK--HKQVANNTKKGKNGSRRRPALQPLPTISDIN 120

Query: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180
           QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER
Sbjct: 121 QKERINRRIDIPPQSSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASER 180

Query: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSR 240
           TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVG+GPSR
Sbjct: 181 TITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGEGPSR 240

Query: 241 AGKRKISWQDQVALRV 257
           AGKRKISWQDQVALRV
Sbjct: 241 AGKRKISWQDQVALRV 254

[Close]

BLAST of Carg14081 vs. ExPASy TrEMBL
Match: A0A0A0LW13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.5e-104
Identity = 212/260 (81.54%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKG  SQ+P V++DSK RFKHQ+LLQDYH+LEKET T KRKLQMMKQKKMTLMAEVR
Sbjct: 1   MKKMKGVVSQYP-VYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVR 60

Query: 61  FLKKRYEYLMKNQ--LPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISD 120
           FL+KRYEYLMKNQ    + +SN   VQQKQ   QVANN KKGKNG RRR AL PLPTISD
Sbjct: 61  FLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTISD 120

Query: 121 INQKERINRRIDIPPQSSTPIPVLDLNQKAKT--RKKANQQNSTPVFDLNQKERMYSGRD 180
           INQKE    RID+P Q+STPIPVLDLNQKAKT  RKKA+Q NSTPVFDLNQKERM SGRD
Sbjct: 121 INQKE----RIDMPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGRD 180

Query: 181 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQTHY+ LR DELKKSLLRGGNDEQQNDIKISACR++GD
Sbjct: 181 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 240

Query: 241 GPSRAGKRKISWQDQVALRV 257
           GPSRAGKRKISWQDQVALRV
Sbjct: 241 GPSRAGKRKISWQDQVALRV 255

[Close]

BLAST of Carg14081 vs. ExPASy TrEMBL
Match: A0A5A7T0V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00530 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.7e-104
Identity = 211/260 (81.15%), Postives = 226/260 (86.92%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKG  SQ+P V++DSK RFKHQ+LLQDYH+LEKET T KRKLQMMKQKKMTL+AEVR
Sbjct: 1   MKKMKGVVSQYP-VYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVR 60

Query: 61  FLKKRYEYLMKNQ--LPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISD 120
           FL+KRYEYLMKNQ    + +SNG  VQQKQ   QVANN KK KNG RRR AL PLPTISD
Sbjct: 61  FLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISD 120

Query: 121 INQKERINRRIDIPPQSSTPIPVLDLNQKAKT--RKKANQQNSTPVFDLNQKERMYSGRD 180
           INQKE    RID+P Q+STPIPVLDLNQKAKT  RKKANQ NS PVFDLNQKERM SGRD
Sbjct: 121 INQKE----RIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 180

Query: 181 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQTHY+ LR DELKKSLLRGGNDEQQNDIKISACR++GD
Sbjct: 181 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 240

Query: 241 GPSRAGKRKISWQDQVALRV 257
           GPSRAGKRKISWQDQVALRV
Sbjct: 241 GPSRAGKRKISWQDQVALRV 255

[Close]

BLAST of Carg14081 vs. ExPASy TrEMBL
Match: A0A1S3B8I5 (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.7e-104
Identity = 211/260 (81.15%), Postives = 226/260 (86.92%), Query Frame = 0


Query: 1   MKKMKGAASQHPSVFDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVR 60
           MKKMKG  SQ+P V++DSK RFKHQ+LLQDYH+LEKET T KRKLQMMKQKKMTL+AEVR
Sbjct: 1   MKKMKGVVSQYP-VYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEVR 60

Query: 61  FLKKRYEYLMKNQ--LPNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISD 120
           FL+KRYEYLMKNQ    + +SNG  VQQKQ   QVANN KK KNG RRR AL PLPTISD
Sbjct: 61  FLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTISD 120

Query: 121 INQKERINRRIDIPPQSSTPIPVLDLNQKAKT--RKKANQQNSTPVFDLNQKERMYSGRD 180
           INQKE    RID+P Q+STPIPVLDLNQKAKT  RKKANQ NS PVFDLNQKERM SGRD
Sbjct: 121 INQKE----RIDMPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGRD 180

Query: 181 ASERTITPFFDLNQISMEEEELQTHYDTLRADELKKSLLRGGNDEQQNDIKISACRTVGD 240
           ASER ITPFFDLNQIS+EEEELQTHY+ LR DELKKSLLRGGNDEQQNDIKISACR++GD
Sbjct: 181 ASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIGD 240

Query: 241 GPSRAGKRKISWQDQVALRV 257
           GPSRAGKRKISWQDQVALRV
Sbjct: 241 GPSRAGKRKISWQDQVALRV 255

[Close]

BLAST of Carg14081 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-22
Identity = 80/249 (32.13%), Postives = 119/249 (47.79%), Query Frame = 0


Query: 15  FDDSKIRFKHQTLLQDYHELEKETETAKRKLQMMKQKKMTLMAEVRFLKKRYEYLMKNQL 74
           F+D K+RF+H +L+QDY EL  ETE  +++LQ ++++K TLMAEVRFL++RY +L ++Q 
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQ- 75

Query: 75  PNDHSNGNPVQQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDINQKERINRRIDIPPQ 134
                            Q     ++   G + R  + P       N+ E   + + +P  
Sbjct: 76  ----------------PQEIKKVRRSNGGKKIRVEVSP------SNKSEAETKHVSLP-- 135

Query: 135 SSTPIPVLDLNQKAKTRKKANQQNSTPVFDLNQKERMYSGRDASERTITPFFDLNQISME 194
                                        DLN  E+ +     S +   P FDLNQIS E
Sbjct: 136 -----------------------------DLNHSEKAHDETKTSPKRRVPLFDLNQISGE 195

Query: 195 EEE----LQTHYDTLRADELK--KSLLRGGNDEQQNDIKISACRTVGDGPSRAGKRKISW 254
           EE+    +  + +  R +E    K L+    + QQ D+K S+CR  G+G   + KRKISW
Sbjct: 196 EEQETEAVDNNQENTRVEESNSCKRLMISSIEMQQKDVKPSSCRNGGNG---SNKRKISW 207

Query: 255 QDQV-ALRV 257
           QD V ALRV
Sbjct: 256 QDPVAALRV 207

[Close]

BLAST of Carg14081 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16
Identity = 80/235 (34.04%), Postives = 122/235 (51.91%), Query Frame = 0


Query: 33  ELEKETETAKRKLQMMKQKKMTLMAEVRFLKKRYEYLMKNQ--------LPNDHSNGNPV 92
           ELEKE E  +++L+M+KQK++TL +EVRFL++RYE+L ++Q        L    S G  V
Sbjct: 26  ELEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEV 85

Query: 93  QQKQLNKQVANNTKKGKNGSRRRPALHPLPTISDI-NQKERINRRIDIPPQSSTPIPVLD 152
            +K       +  +K ++G R       L   + I N+KE +          +  +   D
Sbjct: 86  PRK------PSGERKKQSGVRASVPCFDLKLKNTICNEKEAL----------ANNVASCD 145

Query: 153 LNQKAKTRKKANQQNSTPVF--DLNQKERMYSGRDASERTITPFFDLNQISMEEEELQTH 212
           L++K K R + +   + PV   DLN  E   SG D       P FDLNQIS EEEE + +
Sbjct: 146 LDKKRK-RSRGSDVLTFPVSLPDLN-GEGNTSGTDK-----VPGFDLNQISREEEEPEVN 205

Query: 213 YDTLRADELKKSLLRGGNDEQQNDIKISACRTVGDGPSRAGKRKISWQDQVALRV 257
            + + A+ +K ++L     +   + K+  C  V    +RA KRK++WQD VAL V
Sbjct: 206 GEHMVAEAMKNAMLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237

The following BLAST results are available for this feature:

BLAST of Carg14081 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035686.1	6.1e-137	100.00	hypothetical protein SDJN02_02484 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022932147.1	5.2e-136	99.61	uncharacterized protein LOC111438466 [Cucurbita moschata]	[more]
XP_022965187.1	4.6e-132	97.66	uncharacterized protein LOC111465117 [Cucurbita maxima]	[more]
XP_023531576.1	2.3e-131	97.28	uncharacterized protein LOC111793773 [Cucurbita pepo subsp. pepo]	[more]
KAG6587817.1	1.8e-128	100.00	hypothetical protein SDJN03_16382, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg14081 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg14081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVU7	2.5e-136	99.61	uncharacterized protein LOC111438466 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1HJN9	2.2e-132	97.66	uncharacterized protein LOC111465117 OS=Cucurbita maxima OX=3661 GN=LOC111465117...	[more]
A0A0A0LW13	2.5e-104	81.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1	[more]
A0A5A7T0V7	5.7e-104	81.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B8I5	5.7e-104	81.15	uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=...	[more]

BLAST of Carg14081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57910.1	3.1e-22	32.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G30630.1	3.4e-16	34.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..113
None	No IPR available	PANTHER	PTHR34807	OS08G0270800 PROTEIN	coord: 1..256
None	No IPR available	PANTHER	PTHR34807:SF3	OS08G0270800 PROTEIN	coord: 1..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14081-RA	Carg14081-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane