Carg12277 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12277
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	helicase protein MOM1 isoform X3
Location	Carg_Chr01: 2628748 .. 2634412 (-)
RNA-Seq Expression	Carg12277
Synteny	Carg12277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGTGAGATTACACACCAATACTGCAATGTGTGGGCACAAAGTAAATTATATTGCAGTTTACTGGATATCTTTTTGAAGGTGTATCCTTTAATAGTTTTCATCATTGCAGTTTACTTGATATCATCACTAAATATGATTCAGATAACCCTAACTTTTTAGACTTGCATACAGCTGCAGTTTAAACATGGTAAATGGGAAGTATTTCATTTGAGTTTTTAGGTCTGTATTATGGCTCTATATTTATATTTCAGCTTGGTTAGGCCTGTTGGAATACTGAATAATCCTGTTAAATCCACCGAGAAAAAATGTACGGGGTCATAAAGTGAACATTATGGCATTATACTCAGTATCTAGCATTGTTGCTTGAACCAGTTGGCCATTGATTTTCTTATTTTATTTTATTTTTATTTTTTATTTTTATTTTTTATTCCGTGGAGTGTGGAGCCAGCTTTCGTGCACCTCAAGCATTTCTCATAGGACAATCGCCTGACCCTACATCTTTAGTTCCAAGGTATTTAAGTATTTATATTAAATCTTAGGTAGGGTTGCTACCATGGCTTAAATTCATTTCTTCTAAAACCTTTAATTTTTACATAACCCTTCTTGACACTAGGCCAACCTGGTGGTTAGTTGGCCATGTTTGATGGTAGAATCTTTAATGCTTCTCCTAAGATTATTGAGGATTCGAAGACCAAAATAAGATGAGGAACAGATGTTCAAGCTTGATTGAGAAAGCATTGGACAAAGTGGATCGGACTTCCTAGATGCCATCCCAAAACAAAAGGCCTTCTGAACACTTTGGAGGAAATGAATCTATGGATGCATCTCTAGTGAAAATATTCCATCATAGTTAACAGAAGATCATGTCATTCAGAGGCAAGCTTTTTCTATGGATGGCTTCAAACAGAGTGCAAAACTTTTAATTTAATTGTGGAAGAAAGAGGGGAGATCCTTTCTTCTCAGCAGATATTTCAATAGAAACGTTGGATACTTCTTTAATCTTTATACGGTCTTAGAAGGAACTGTTCTATTTTGGACCAACCTTGATTGGGCCCTATGAATGAGGACTGGAGTAGAATAGAGCTCCATTTGAAAAAGAGGAGATTCTTAAGGCTATTAAGAATCTGAGAATCTGAAGTCACATCTCTGAAAGCAGCTTGGGACAATTCTTGAAAATGACTAATAGGGTAAGATTTCTTTTGGAGTGGGTATTATTTAACTGCACAATGAGACATATGCTTACCTTATACTAAAGAAGGATAAGCCTCAATGGGTTTATAAACTGTAGACCAACGAGAAGGTTATGACATAATGCTTGCCTTATCTAGCTTTGTATGAGGACACCAACGAGAAGTTTGATCATGATGAACTCACCAATCAAACTAATCTTACTCAGAGTGGAAAACTTCAAATTTGAGAATATTTGATTTTTGTGGGAAAGAGAGACAGCAAAGCTTTCAACGGTCTAGCCAGCTTTGCCGCTGCCAGAGTACTCTCGCGGCCTCTATATATAATAATTTTTTTAATTCATTTTTCCTTTTGATTTTATGTATAAATTTGGTATTTCATTATCTTTTATATAGTTTAACGAAATGTGTTAATAAATCATGTGATATTGTTTTTTGTATGTTTCTCATTTTTCAACCTATATATTATTTTGGCATCATACAGTAGTTTGAAAGAGCCTGACTAAAGAGGCTTTATTGTGTTAATTGATGACTAGTGCTTGCTATTCTTCTATTCTAGTACATTCTTCTATTGGATTCTTCTGATTTGTCGTTTCTTTTCGTGTAATTTGCAATGTGATTAGATAGTTGATATTCACTTCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGATGTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAATGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGGTAACACTTGGCCCCTGTTAGTTAATTTATTTTTGATACATTATTGGATCTTGGAAATGTTTGTTCCCATCGAATTATATGACGCTGGATGGTTGATCAGATTCCTTCCAAACATGATAAACTACTTCATTTACTTTAGCAATATTAGTCATAATTTTTGCTCAACTATTATTTTGGATAATATGCTTAAAAGCTTTGAACTTCATTCAAACATCATACTTTCTGCATGGATCTAGATGTGTTGACTGTATAAACTGGGAAGTAATAGTAGTGCTGAGATGAGTCAACTCAAACGCCCAACGAATTCTCCACACATTTAGAGAAAATGAAGTTTCTAAACGCAGATATGTGGCTTCTTGTTCTAGTGATCAGCTAAAGGTTTGTTTCTCGTGTGAGTGCTTTATTAACCCTCACATTTGAATTATCGTTTACACCAATACTTTTTGACTTTGCAGGATAATCAATAGATGATTATCATAATCTTCTCTCTCTACTTGAGGGAAATAACCAGTTCAAAGTGATAATACTTGAAGACCAATGAATGGTGATAACATCAGCAAACTGAAGGAAAGATTATTTATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGCTGGATTGCTGTCTCATCATTCAAAAGTGATCTGCTTGACAACTCCATGAAATTGTCGTTTCAACTCGGAAAGTTTATTCTTGACTCTTACATCATTATATCTTCTCTCTTCTCTCTATTGAAAAGTCTATTTATGCCTAAACAACTACCTTTCTTATTGAATGGGATAGTATATTTTCTCAAATTGAAATAAAAGGGAAAAGATCAGTAGATTCATTGATGATTATTTTGTATGTTCTGTCTATAATATTTTATTGGAAACACTTTCATTATGATATATATTAATAGATAAATATATATATATATTATATATGAGTATTTCTCTATATGCTGTTCTAGTGTTAATATATCTCTATTGTTAATATTATACTTAGAGGTAAATAATATAAAGAGAGAAATAATATATATCAGCGTGGCCACGTAACCTAAATATAATTTAAATTTTATTCAATTTATGAAAAACAAATTTATTATTATAATTACTAAATGTCTCTCTATAATAGATCGAATTATAAGCTGTCTGATTCACAGTTAATATATCTATATATATATATATATATTACAAGTTTATTTGAAAACTAAATATATATAATCAAAGCCTTTTATTTGCTTCATATATCTATATCTATATATCATGTGACTATATTCAGTAAAATCTCCTCCCGTTAGGCAATGAGTTCAAGTTCTGCCTCTAAAAGTAAAACAACTCACCCAGGACCTCATTGCCAATGGTAATACGTAGTGTCGTGTTCCAAGTATCCGGAGAGATATATATTGCAGTATCTTAGTTGGCCCCTTTCTCTATATATATATATATCGCAAAAATTGTTATTATATTAATGTATACTTTTAAAGATCCTATATAAAAATCTCCAATATCCAAATAATCATCTATCGCAATCTCGACTCTGCCAGAGAAAGTTTCTGCTGTTCGTATAATAATGTAATGTTCCATTATTTTTTTTTTTTTTCATTCTATCTATCTTGTCTTATATGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTAGATTTCTGTTTTAAATTTTCTCATTGTTTGTCATTGTTTGAACTGAATGGACTGAAAATACATACTTGTTTGTGGTCTTAGCCTTGATCTGTTTATTCTATGATATTCTGATAAGAAAGGAGAATCGGCTTCTAATGTCATGTATGGTATCTTGACAGCTCGTTGTAATATCCCTATATTCTGGAACCTTCAATGGGAAATGTGAACACCAAAGGGGCTCCAGAGTGGATTACTTGGATATTGGAATAAAAGCGTGGTAAGCTACAACTTCTTGATGCACATGCCTAAGGGAGATGAAAAAAAACAGGCATCGAGAGTCTAATTCTTTTCCAGGTAGTCCATATGGTTTGAATTGGTAATTTTTGTTTTTGAGGTTAATAGCTTTTGAGATAGGTGCTTATTAATATATCTGAAGGGATGGAATGTGGAATTCAGGCTTATTATTATTATTATTATTTATTTATTTAAAAAAAAAGAAACTGATCTGGCATTGAACTTACTTAATGCACGAGTTTAGATGACCATAGGATTGTATTATTATGATTGAAACTGTAATCAAAATGAACAGCTTTTATTAGTTAAGTGAAGGATCGCTAACAAGAGCCAGGATAGTAATATGGTACAATTCTGGTGTACGGAGAACAGATTTGTCAGAGACTTTGAACGAAACTACTCCTGGAGGGAGTGAATTAAAAAAAATAAAAATAAAAAGAAGCAAAATTAAGGAGTTATTAGAACCTTCTAATTTATGCAAATAATCCTGCAAAGAGAAATGGAGAGTAATTTAGAAAGAGAATACCATTGCAAAACTTACAATCTAGCCATTAAAAATCGTTTTAGACCATTTGATAATCAATCTGGTTTTATATTTTTCGTTTTCCTGTTTTCTATTTTTTAGAAAATGAGAGAGAGAGAGACGAATTTTTTTATACAATGGGAGTTCGATACATCACGTTTTTTGAGATTTAGTTCACCTTCAGATGGATACAGTTTTCATTCTACACAATAAAATTTTTATTTGTCTGGGTCTAAAATTAAGTGCTTAAATCAATTATTTTTGTTTCAAGATTTCCCCTCTTCTCCCTCCCATTATTTTCTTATCTGTGATTTGTTAAGTGGTATAATTCATTTTATATTTTTGTGGAGGGAAATTTTAAATGTGGAAAATATTCAATTGGCAGTCAATTTGGTGATCTGGAAGGACACCTAATTGGTGATATTTTTAGATGACTTTTTGGCGTCAGAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAGAGAGTGGAAGAATTTGTTTCTGCTAGAAGTTCGAGCATGCCTCCCAAGTATTAAACTTTCGTCAGTTGACAGCATTATCATTTATGATAGTGACTGGACCCCATGAATGATTTAAGAGCACTTCAGAGATAACACTTGATTCTCAGTTGGAGCAGATAAAAATTTTCGCTTATATTCATCTTTGTACTGTGAAGAAAAGGTTCTTATGCTGTCCCTGCAAAATAAAACTTTGGAGGGAAATTTACAGAACATCAGCTGGAGTTGTGCTAATATGCTGCTAATGTGGGGAGCATCTAATTTATTCGCGCGACTTAGATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGCACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA

mRNA sequence

ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGATGTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAATGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGCAAACTGAAGGAAAGATTATTTATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGCTGGATTGCTGTCTCATCATTCAAAAAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAGAGAATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGCACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA

Coding sequence (CDS)

ATGTCACCAAGCTTTGTGAATTTTGGCACGAGGCAAAAAATGCTGGTTGTGATTGATAATCAGGATCGCATGATGAAGGTTATTGCAATTTATTTAACTTTGCGCCTGATGTCCTTCGGCCCTTTCTCATCATCTCAACTTCCACTGCACTTGGTTCCTGATGATCAGTTATTTCGCTATGCACCGTCTTTCAGTGCTGTAGTTTACAAGGGAAACAAAATGTACGAAAAACATAAGAGACTAGAGTTTTTACCAGGGAAATCGCCCGTTGTTTCAAGCTGCTATTTGCTCCCAGAAGTAATGATGGAGCAAACTGAAGGAAAGATTATTTATATCATACTGCTTAATACCTGCACCTCTAATAATTTGTTGAGTACTGGTTTCCTGCACGTATATCAAATGTGCAATCTTGCAGCTTTATGTGCACCTATTTCTAATGCTGGATTGCTGTCTCATCATTCAAAAAGGTTTGGGATTGATTCTTATGAACGCATTGATGGGGTCTTATTTATTCCAAAAAGCAAGCTGCCTCTAAACAAATTAACACCAGAGAATAAGTTCCTTGACAAGGATAAAACTGCAGATTCCTTATCAGATACAGCATTTTTGGAAGAAGTGGTAAATGATTTGGTTTTACTTATTTCACAAAATGCCAGAAGCACAGACGAATTTGATTCCCATGTCATATTAAAAAGTTCAACAGATTGA

Protein sequence

MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRYAPSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTSNNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNKLTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD

Homology

[Close]

BLAST of Carg12277 vs. NCBI nr
Match: KAG7036833.1 (hypothetical protein SDJN02_00453, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.9 bits (1195), Expect = 4.0e-127
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRY 60
           MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRY
Sbjct: 1   MSPSFVNFGTRQKMLVVIDNQDRMMKVIAIYLTLRLMSFGPFSSSQLPLHLVPDDQLFRY 60

Query: 61  APSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTS 120
           APSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTS
Sbjct: 61  APSFSAVVYKGNKMYEKHKRLEFLPGKSPVVSSCYLLPEVMMEQTEGKIIYIILLNTCTS 120

Query: 121 NNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNK 180
           NNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNK
Sbjct: 121 NNLLSTGFLHVYQMCNLAALCAPISNAGLLSHHSKRFGIDSYERIDGVLFIPKSKLPLNK 180

Query: 181 LTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD 236
           LTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD
Sbjct: 181 LTPENKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILKSSTD 235

[Close]

BLAST of Carg12277 vs. NCBI nr
Match: KAG7036831.1 (Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 523 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 569

[Close]

BLAST of Carg12277 vs. NCBI nr
Match: KAG6607145.1 (Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 1202 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 1248

[Close]

BLAST of Carg12277 vs. NCBI nr
Match: XP_022949441.1 (helicase protein MOM1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 739 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 785

[Close]

BLAST of Carg12277 vs. NCBI nr
Match: XP_022949439.1 (helicase protein MOM1 isoform X1 [Cucurbita moschata] >XP_022949440.1 helicase protein MOM1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 1170 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 1216

[Close]

BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1GCT4 (helicase protein MOM1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452784 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 1170 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 1216

[Close]

BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1GC12 (helicase protein MOM1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452784 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 714 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 760

[Close]

BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1GC13 (helicase protein MOM1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452784 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK
Sbjct: 739 DKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 785

[Close]

BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1KDL3 (helicase protein MOM1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-13
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0


Query: 185  NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
            +KFLDKDKTADSLSDTA LEEVVNDLVLLISQNARSTDE DSHVILK
Sbjct: 1170 DKFLDKDKTADSLSDTALLEEVVNDLVLLISQNARSTDEIDSHVILK 1216

[Close]

BLAST of Carg12277 vs. ExPASy TrEMBL
Match: A0A6J1K931 (helicase protein MOM1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-13
Identity = 44/47 (93.62%), Postives = 45/47 (95.74%), Query Frame = 0


Query: 185 NKFLDKDKTADSLSDTAFLEEVVNDLVLLISQNARSTDEFDSHVILK 232
           +KFLDKDKTADSLSDTA LEEVVNDLVLLISQNARSTDE DSHVILK
Sbjct: 714 DKFLDKDKTADSLSDTALLEEVVNDLVLLISQNARSTDEIDSHVILK 760

The following BLAST results are available for this feature:

BLAST of Carg12277 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036833.1	4.0e-127	100.00	hypothetical protein SDJN02_00453, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7036831.1	3.5e-14	97.87	Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607145.1	3.5e-14	97.87	Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949441.1	3.5e-14	97.87	helicase protein MOM1 isoform X2 [Cucurbita moschata]	[more]
XP_022949439.1	3.5e-14	97.87	helicase protein MOM1 isoform X1 [Cucurbita moschata] >XP_022949440.1 helicase p...	[more]

BLAST of Carg12277 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCT4	1.7e-14	97.87	helicase protein MOM1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452784 P...	[more]
A0A6J1GC12	1.7e-14	97.87	helicase protein MOM1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452784 P...	[more]
A0A6J1GC13	1.7e-14	97.87	helicase protein MOM1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452784 P...	[more]
A0A6J1KDL3	4.2e-13	93.62	helicase protein MOM1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=...	[more]
A0A6J1K931	4.2e-13	93.62	helicase protein MOM1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493379 PE=...	[more]

BLAST of Carg12277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45623	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED	coord: 16..74
None	No IPR available	PANTHER	PTHR45623:SF13	HELICASE PROTEIN MOM1-LIKE ISOFORM X1	coord: 16..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12277-RA	Carg12277-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0046872	metal ion binding