MELO.jh019151.1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO.jh019151.1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRibosomal protein
Locationchr08: 29966269 .. 29971099 (+)
Sequence length708
RNA-Seq ExpressionMELO.jh019151.1.t1
SyntenyMELO.jh019151.1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATCTTTGTCGTCTCCTCCCATTTTCGTCTCCTCTCTCAACGCCGTCGGTCGTCGCTGCTACCCTTAACTTCTCTGTCTTTGAATGCAGGCAACCGCTGCTACCGTTTAGGTTCGAAAGTCGCTGCTACCTTTTAGGTTCAAACGTCGCGTCTCCTCTCCCTCAACGCCGCTACTACCCTTTGTAAGTCTTAGTTCATCTCCCTTCTCTTGAATCCTCGAAGAATTTTTTTAACTTTTTCTTCCATGGTAATGATATTGTGTTGAGAGTTGAAATTCAAAGAGCTAAAATATTAAGGAAATTCTTCGAAATTCTATTGCTTTTGTGTTTTTGATGGCGGAGAGTGAGGTTAAATTAGGGTAGAGGTTGATTGATAGGAAGGTGGGGGCTGAAGAACCATTGTTGGTGAGACTTCAATAGGCAGTGAAGCATGTTAAAAAGGAACAACATAATGTTTTACTTTTGATGATTGAAAAGGCACATGAGTTTCTTTCTTTGGAATGTTTTACTGTTGAATCTTTAGCTTCCTCTATGCAAGTAGTTATCGCTTTTATTTGTTTGATGGTAATATAGTTTTGCCTGAAACTTGCATAGTTTTTGTTTTGGATTCTATTTCAAATGCTTGGTAATGGTATGACTAGAGAAGTTCTCACTATTCATGTATCCTAGTTTGATAGATTTAACATATAGTTCATTTTTTGCAATTGAGTTTGATATCTTTAGTAATTTCTTTGATCTATCTGAAAAAGTAGAACATATATGTATTAATATCAATTCAATGTCTTCTGTTGCTTATTCAATATGCAAATGTGACATTAAGAGAGGGAGGAGGACAGATGTTTGGATTAATTATGACTATGCTACTTTGAATTTGAGTATTACTTTTACTAGGTATGAGAATAATAAAACTATATTGCAAAAACTTAATCATGATGTAGACTTTAAGTTGACTCTACCTAAACCCAAGTACTTCATCTTCTGTGTGTTCTTCTAGTTTGTAGTGGGTTCTATACATATGTATCAATATGCTCATTCTATCTTGTAATGTGTTTTAAGGTTGAGATTATCTCTCTTTTTTGGGTCTAGCGATGGTGCATTTCAGTTTGCAGATGTGTGGTTGTGTGAGGTGACCTTATATGTTCTTTGATTTGTTATTCATTTGTTATAATTAATAGCAAAGTTAGATATTGTTATTGGTTGCATATGTTCCCTTTGTGCTCCTAAAAAAATGTTAGGGTTGGTCTTCATGTTGACAACAAGATATTGTTTTACAATAGGCGCTAACTCAACAACGCCATTATCCATTCCCTAAGGTACCTAACTCAAAAACGCATTTTAACTATTTTGTGATTCTTTAAAAGGTGTATTAATGGTTTTATGAAATATATTGATGGTTTGTGAAATATATTGTTGGCTATGTGATGAAGCATTTTGGTTGCTTACAATGTGTATGATGAAATGCCTTAATTAAGCCTTTGGTTGATTTGTAATTGATTTTTAATAGATTTTAAGCTTTGATGATGTGTAGGGCCTTTAAGAATTTTCTAGAGTTTAGTTGTTACGGTCATACATGTTTAGTGTTAGGTTTTATTTCTAGTAGTGCAGGAATTTCAATCTTCTCTCTTATTGAAAAGAATATTTAGTCTTAGGATGTATTTAGGATTGTTTCTCAAGTAATGACTTTTGGAATGAATGGAAAATTATGTGGATACTTGGTTCTATATTCTGCTATGGTTTCTTACATAGCATTATAAAGTGCTTACATCTTTTTTTAAAACATGAAAATTTTTAGAAGACTGTTGCCAAAGACACTCTTAAGGATGGTCTTCATCACACATTCATGTTCTTTAAAAAATGTCCAAAAAGTTGTGAGTGAAGTTGATGGTTACCAACCTCATTTAATTGCTCCGAAGCAAGGATACAGGAGGCTTATTTATGGTTCAATAAGCTAATTAGTTTCTAGATTCACCATATTGTGTTGATAATCTTACTTTTTGATTATTGTCTTAAAATCACCTCTTTGTTGCAAAAATTTATTATTAGGATGGTAAATATTTTATTTCCTTCACTTGATTATTCTTTGGCAGTGTTGATTGAATGTGCTTTAATTTCTTAAAGCTCTCAATGCAAAATTGTGAATTTTCTTTAACATTTGTTGTATGCTATTGTAGTTCGAAACTCTCTATTGTAGTTTACAGTGGATTAATAGTGTTGATTTAAAGTGTAACTTTTGAGAATGGGATAACTTTGTTTGGTGTTGCTAGCTATAACTATTTGTAGATTTATTAGAAAATTTTAGTGGATATTAATCTTGTTGTACTTGAATTCTTTAACTTAGAAAACCATTAATTTGCGCTTTCATATGAAGAAATCTGGAAGGTGGACTACATGCACTCTATTTTTAGTACAATAGGACGTGAAGTCATTAAGTTGTGTTCACTTTAGCATTTACATGTACTCTGTTGATGCTGACTTCAACTGTATTTGTCCGCTTTGGCTTACTAAATTTGGTTTTAAGAGGAAAAAAGGTCAATAAACCATGTACTAAATTTGGTCCTAAGAGGAAAAAAGGGTCATTCGTTTCTGGCTGGGTTGCTTTGCTTGGAAACTGGATTTCGTAACACCTTACTTGAACAGGATCAAGGTAAACATTTTTTTTTATGTGCACATTATTAGGAGAAAAAATAGTAAATCAGAAAAAAAAATTTCCTCTACTATTGGTGAGTGAATATCCTTTTTGTAACCAGTGTGACATGTGTGATACATGGTATTTAGAGAATGAAAATATTTATTTGTTATTTGTTAAATTTTCATACGGTTCTGCAGTGTGACATGGTTAATACTGATTAGTTGGTTTTTCCCCTTGAAATCAGTTTCGCAACAATTTCAGTGAAGAGAATGAGATGAATGCTAGGATATGACTTTTTAATTAATTCTCTTATACATATATTTGTTATTTATTTCCTCTTTTAGAAGTGGTCATGTGGATTTTCTTATCTATTCCCATCTCTCTAATCAAATATAAATTTTGAGATTCAGCTTATATTGGACATATTATTGTGCTGCTTTTTAAAACATGTTGTTTATATTTGCATCATATCTCTTCTCATGGTGCTTTTTTTTTTTCTTCAGCTTTCATTTTCTTTCACTCATTTCATATAATCTCATTGCTTTCTAAATCATGTAGGTGAAAAATTCAACGAAGCAAAAAATGCAAGAGCAGATTTGGTTTGGAGGTGAGGATTTGACAGAACAGATCAAAGGAGGTTTCATGGAGTTTGATAAGTTGATTGCTTCACCAGATAAGATGCCCAAGGTATGGTTCTTAAATCTTTTTACTGCTATACATTGTGGTGGATTTCCAAAAATATAAGTATTTCTAACAACATTGTCCATAGTAATGAAGTAGTTTTCACACATACTTTGATTTTTTAGGTTCTCCATTTGATGCACGTTAGTATGACTTAAAAATGAATGAGTTGTAAGTTTTCTGTTTTAACTTTTCTCGACATCCAAGACAATTTGAGTTGTGAAATTATTAAGCTTCATCATTTTATCTTGACAAAATTCTTTTTTAACCTTCTAATTCTAGTTTTCTTCTTATTTGTTTTTATCTCTTGGTCATTGTAGACTTTCAGTTGATGGAAAGGATTTCTTCACTTCATACAATGAAGTTTATGACAATTTTGATTTTATGGGCCTGCAAGAAAATTAAACCTTCTTAGAGGGATCTATGCCTATGGTTGGTATATAGCACTACTTATTTTCTCCTTAACTTGTGAATTGTTTTCTTTTTTTCTATTTATTAATTAATAATTAAGCAATAACTATGGATTTTTAAGTAGTAGTGTACTATTTATTGTTCTAGTTGGTTTGCGATGTTTTGTATTATAATTTCAATGTCATTTTAAAGATTTTGAGAAGCCATTTGCAATTCAACAAAGGGGAATTGTTCCTCTTTGCAAAGGGCTTGATGTAATTCAACGAGCCCAGATTGGAACTAGAAAGACTGCAACTTTTTGCTCTGGCATTTTTCAGCAACTTGATTATGGTCTTGTGTAGTGTCAAGCATTTTACTTCCATTTAAGTTTGTATTCTGGTAATGAATAAGGTTTGTACGTATTGGTTTATTTTTTAATTTGAAGCACATATACTAAATTATTGATACAATCTTTTCATTCTAGTGTATGACACCTATAAGTAGACACCTCTTGAGGTATGCATTTTCTACTAGGAACGTACAGACCCACTATTTCCTCCATATATTTCTAATTTACCAAAAACTTAGATAATAGTCGTTTTTATTTAGAAATTGGTTCTTGAGGCCAATATTGAACAATTTAGTTAGTTGGTGGAAAATATAGCAATTATATAGGTTAAATGAATGGCTTTAAAACTTAGTGCAATCTATCAAAATGCTTTCAACATGTTTGTGTCTCATGATTAGACATGTGTGGAAATCTTTTTTATATTTATGTGCTTTAATTATATAGTAGATTGATTTATTGTCTGGTCTCGTGTATGATTTTGACTTCAAAATATTTTTTGCAGCTAATTTTAAAACTTGGTTCTTATATTGAGGAGCTGAGCAAAACACAAGGTGCTATAAAGGAATTTGTCAATCCCAAATATTTTCCAACTGTTCTATTGCTTACTATTGAGTTGCAATTATTTGGGTCTCTTCCTACTTCCTATTGTATATTCAGGATGTTTCTCGCAACCAGAAATACCATGAAATTTCTTCATAACTAATTTTTTTGCATTTTCAGTTCCTAACTCAATTCCTTTATGATGACTGTATTTATCAATTAATAGATAGTTGTTCCAAGTT

mRNA sequence

CCATCTTTGTCGTCTCCTCCCATTTTCGTCTCCTCTCTCAACGCCGTCGGTCGTCGCTGCTACCCTTAACTTCTCTGTCTTTGAATGCAGGCAACCGCTGCTACCGTTTAGGTTCGAAAGTCGCTGCTACCTTTTAGGTTCAAACGTCGCGTCTCCTCTCCCTCAACGCCGCTACTACCCTTTGTGAAAAATTCAACGAAGCAAAAAATGCAAGAGCAGATTTGGTTTGGAGGTGAGGATTTGACAGAACAGATCAAAGGAGGTTTCATGGAGTTTGATAAGTTGATTGCTTCACCAGATAAGATGCCCAAGACTTTCAGTTGATGGAAAGGATTTCTTCACTTCATACAATGAAGTTTATGACAATTTTGATTTTATGGGCCTGCAAGAAAATTAAACCTTCTTAGAGGGATCTATGCCTATGGTTGCTAATTTTAAAACTTGGTTCTTATATTGAGGAGCTGAGCAAAACACAAGGTGCTATAAAGGAATTTGTCAATCCCAAATATTTTCCAACTGTTCTATTGCTTACTATTGAGTTGCAATTATTTGGGTCTCTTCCTACTTCCTATTGTATATTCAGGATGTTTCTCGCAACCAGAAATACCATGAAATTTCTTCATAACTAATTTTTTTGCATTTTCAGTTCCTAACTCAATTCCTTTATGATGACTGTATTTATCAATTAATAGATAGTTGTTCCAAGTT

Coding sequence (CDS)

ATGCAAGAGCAGATTTGGTTTGGAGGTGAGGATTTGACAGAACAGATCAAAGGAGGTTTCATGGAGTTTGATAAGTTGATTGCTTCACCAGATAAGATGCCCAAGACTTTCAGTTGA

Protein sequence

MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPKTFS
Homology
[Close]
BLAST of MELO.jh019151.1.t1 vs. NCBI nr
Match: XP_008464620.1 (PREDICTED: uncharacterized protein LOC103502458 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 9.14e-17
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
           MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPK  +
Sbjct: 128 MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPKVLN 165

[Close]
BLAST of MELO.jh019151.1.t1 vs. NCBI nr
Match: WP_204986756.1 (50S ribosomal protein L1, partial [Escherichia coli])

HSP 1 Score: 58.2 bits (139), Expect = 3.06e-09
Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
           GGEDL EQIKGGFMEFDKLIASPD MPK  S
Sbjct: 74  GGEDLIEQIKGGFMEFDKLIASPDMMPKVAS 104

[Close]
BLAST of MELO.jh019151.1.t1 vs. NCBI nr
Match: MQL41486.1 (50S ribosomal protein L1 [Escherichia coli])

HSP 1 Score: 58.2 bits (139), Expect = 3.39e-09
Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
           GGEDL EQIKGGFMEFDKLIASPD MPK  S
Sbjct: 79  GGEDLIEQIKGGFMEFDKLIASPDMMPKVAS 109

[Close]
BLAST of MELO.jh019151.1.t1 vs. NCBI nr
Match: GAU46796.1 (hypothetical protein TSUD_268570, partial [Trifolium subterraneum])

HSP 1 Score: 58.2 bits (139), Expect = 7.24e-09
Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
           GGEDL EQIKGGFMEFDKLIASPD MPK  S
Sbjct: 98  GGEDLIEQIKGGFMEFDKLIASPDMMPKVAS 128

[Close]
BLAST of MELO.jh019151.1.t1 vs. NCBI nr
Match: AIA26110.1 (50S ribosomal protein L1, partial [Fargesia spathacea])

HSP 1 Score: 57.0 bits (136), Expect = 7.96e-09
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPK 35
           GGEDL EQIKGGFMEFDKLIASPD MPK
Sbjct: 94  GGEDLIEQIKGGFMEFDKLIASPDMMPK 121

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy Swiss-Prot
Match: P49208 (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-08
Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 39
           GGEDL EQIKGGFMEFDKLIASPD MPK  S
Sbjct: 148 GGEDLIEQIKGGFMEFDKLIASPDMMPKVAS 178

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.6e-06
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPK 36
           G +DL EQIKGGFMEFDKLIASPD M K
Sbjct: 204 GSDDLIEQIKGGFMEFDKLIASPDMMVK 231

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-05
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 39
           GGE+L EQIKGGFM+FDKLIA+ D M K  S
Sbjct: 210 GGEELIEQIKGGFMDFDKLIATSDMMAKVAS 240

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy Swiss-Prot
Match: B8JB73 (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) OX=455488 GN=rplA PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 2.1e-04
Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKM 34
           G EDL E+I+GGFM+FDKLIA+PD M
Sbjct: 96  GAEDLAEKIQGGFMDFDKLIATPDMM 121

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy Swiss-Prot
Match: Q2II81 (50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=rplA PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 2.1e-04
Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKM 34
           G EDL E+I+GGFM+FDKLIA+PD M
Sbjct: 96  GAEDLAEKIQGGFMDFDKLIATPDMM 121

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy TrEMBL
Match: A0A1S3CLX4 (uncharacterized protein LOC103502458 OS=Cucumis melo OX=3656 GN=LOC103502458 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 4.42e-17
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 1   MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
           MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPK  +
Sbjct: 128 MQEQIWFGGEDLTEQIKGGFMEFDKLIASPDKMPKVLN 165

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy TrEMBL
Match: A0A5K1ANG9 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS13625 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.32e-10
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 8  GGEDLTEQIKGGFMEFDKLIASPDKMPK 35
          GGEDL EQIKGGFMEFDKLIASPD MPK
Sbjct: 15 GGEDLIEQIKGGFMEFDKLIASPDMMPK 42

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy TrEMBL
Match: A0A2Z6NT41 (Ribosomal protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_268570 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.51e-09
Identity = 27/31 (87.10%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
           GGEDL EQIKGGFMEFDKLIASPD MPK  S
Sbjct: 98  GGEDLIEQIKGGFMEFDKLIASPDMMPKVAS 128

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy TrEMBL
Match: A0A088CEK1 (50S ribosomal protein L1 (Fragment) OS=Fargesia spathacea OX=146655 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.85e-09
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPK 35
           GGEDL EQIKGGFMEFDKLIASPD MPK
Sbjct: 94  GGEDLIEQIKGGFMEFDKLIASPDMMPK 121

[Close]
BLAST of MELO.jh019151.1.t1 vs. ExPASy TrEMBL
Match: A0A6N2MMJ5 (Ribosomal protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS373403 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.58e-09
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 8  GGEDLTEQIKGGFMEFDKLIASPDKMPKTFS 38
          GGEDL +QIKGGFMEFDKLIASPD MPK  S
Sbjct: 22 GGEDLIQQIKGGFMEFDKLIASPDMMPKVAS 52

[Close]
BLAST of MELO.jh019151.1.t1 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-07
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPK 36
           G +DL EQIKGGFMEFDKLIASPD M K
Sbjct: 204 GSDDLIEQIKGGFMEFDKLIASPDMMVK 231

[Close]
BLAST of MELO.jh019151.1.t1 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-07
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0 

Query: 8   GGEDLTEQIKGGFMEFDKLIASPDKMPK 36
           G +DL EQIKGGFMEFDKLIASPD M K
Sbjct: 204 GSDDLIEQIKGGFMEFDKLIASPDMMVK 231

The following BLAST results are available for this feature:
BLAST of MELO.jh019151.1.t1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464620.19.14e-1792.11PREDICTED: uncharacterized protein LOC103502458 [Cucumis melo][more]
WP_204986756.13.06e-0987.1050S ribosomal protein L1, partial [Escherichia coli][more]
MQL41486.13.39e-0987.1050S ribosomal protein L1 [Escherichia coli][more]
GAU46796.17.24e-0987.10hypothetical protein TSUD_268570, partial [Trifolium subterraneum][more]
AIA26110.17.96e-0992.8650S ribosomal protein L1, partial [Fargesia spathacea][more]
BLAST of MELO.jh019151.1.t1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P492082.4e-0887.1050S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=R... [more]
Q9LY666.6e-0682.1450S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ... [more]
Q9LE952.5e-0570.9750S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=... [more]
B8JB732.1e-0473.0850S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC B... [more]
Q2II812.1e-0473.0850S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=2903... [more]
BLAST of MELO.jh019151.1.t1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CLX44.42e-1792.11uncharacterized protein LOC103502458 OS=Cucumis melo OX=3656 GN=LOC103502458 PE=... [more]
A0A5K1ANG96.32e-1092.86Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS13... [more]
A0A2Z6NT413.51e-0987.10Ribosomal protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_268570 PE... [more]
A0A088CEK13.85e-0992.8650S ribosomal protein L1 (Fragment) OS=Fargesia spathacea OX=146655 PE=4 SV=1[more]
A0A6N2MMJ58.58e-0983.87Ribosomal protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS373403 PE=3 SV=1[more]
BLAST of MELO.jh019151.1.t1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63490.14.7e-0782.14Ribosomal protein L1p/L10e family [more]
AT3G63490.24.7e-0782.14Ribosomal protein L1p/L10e family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 5..37
e-value: 7.8E-8
score: 33.8
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 7..35

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO.jh019151.1MELO.jh019151.1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh019151.1.t1.exonMELO.jh019151.1.t1.exonexon
MELO.jh019151.1.t1.exonMELO.jh019151.1.t1.exon_2exon
MELO.jh019151.1.t1.exonMELO.jh019151.1.t1.exon_3exon
MELO.jh019151.1.t1.exonMELO.jh019151.1.t1.exon_4exon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh019151.1.t1.start_codonMELO.jh019151.1.t1.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh019151.1.t1.cdsMELO.jh019151.1.t1.cdsCDS
MELO.jh019151.1.t1.cdsMELO.jh019151.1.t1.cds_2CDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh019151.1.t1.stop_codonMELO.jh019151.1.t1.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO.jh019151.1.t1MELO.jh019151.1.t1-proteinpolypeptide