MELO.jh018421.1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018421.1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 14519644 .. 14519905 (+)
Sequence length262
RNA-Seq ExpressionMELO.jh018421.1.t1
SyntenyMELO.jh018421.1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGATCGGCTTGGACGGAGGAGGTTTGACTCCGATTGCAAGAGACTCGGCTTGGATCTTCGAATGGTGGTTGCACGCGACGGAGAACTATACGTTGGATGAAACTGAACGTGGATGGAATACGTCGATGCACAACAGATGGCTGAGTAAGGAGGCTTCAATGGATAGAGAGATCTCCCGAATGAAACAGAGAAGAGGACGACTTGCAAAGACTGGACGTGGCTCAAATTTTATCGAATGGAGATCTTCAACTTCGCCTTAG

mRNA sequence

GGTGATCGGCTTGGACGGAGGAGGTTTGACTCCGATTGCAAGAGACTCGGCTTGGATCTTCGAATGGTGGTTGCACGCGACGGAGAACTATACGTTGGATGAAACTGAACGTGGATGGAATACGTCGATGCACAACAGATGGCTGAGTAAGGAGGCTTCAATGGATAGAGAGATCTCCCGAATGAAACAGAGAAGAGGACGACTTGCAAAGACTGGACGTGGCTCAAATTTTATCGAATGGAGATCTTCAACTTCGCCTTAG

Coding sequence (CDS)

ATGCACAACAGATGGCTGAGTAAGGAGGCTTCAATGGATAGAGAGATCTCCCGAATGAAACAGAGAAGAGGACGACTTGCAAAGACTGGACGTGGCTCAAATTTTATCGAATGGAGATCTTCAACTTCGCCTTAG

Protein sequence

MHNRWLSKEASMDREISRMKQRRGRLAKTGRGSNFIEWRSSTSP
Homology
The following BLAST results are available for this feature:
BLAST of MELO.jh018421.1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh018421.1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh018421.1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh018421.1.t1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO.jh018421.1MELO.jh018421.1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh018421.1.t1.exonMELO.jh018421.1.t1.exonexon


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh018421.1.t1.start_codonMELO.jh018421.1.t1.start_codonstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh018421.1.t1.cdsMELO.jh018421.1.t1.cdsCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO.jh018421.1.t1.stop_codonMELO.jh018421.1.t1.stop_codonstop_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO.jh018421.1.t1MELO.jh018421.1.t1-proteinpolypeptide