MELO3C033219.jh1.t1 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAAACTCTTATCTTTTTTCCATCTTCCCCAATTTTCTCCAATCACGATGCTCCCCCTTCACACTACGCGATCTTCCCTCCACCACCCAAGCTCTAGACGGTAGCCGTTCATATACCGCAGTCACTCCCGCTCCACCACAGATCCCAACTCTTCTGTATAGGCACCGCACATGACTGAGGACAGGCTCCGTCTAGAGACACAGACGCTTCACACAGAAGCATAAGCTTCACCAATTTTCTCCGCAGACGCTTCACGCACAGACACCGTGCATGGCTGAGGAATGCTGCAAACCTTCTTGCCACCAACTCCACTTTAAAGTTAGGATACACGTAATAAGGTGTATAATTCAGCCTCATTTGATAACTATTTGATATTTTAAAAAACGAAACTTACAAATACTACTTTTTGTTGATTTGGAATTCAAATGTTTCGTTTTGGAATTCAAATATTTTTCTCTTACAAACAAGAAGCAAGCATAAATTTCAAAAACAACTTAATTTTCTGTTAATTTTTAAATTTTAGGTTGAGGGTGTCAAACACTCTTGCCCTAAGAAATTGATTCTGCATTTCATCGGAGCCACTAACATTCTTTACACATTCGGAGGTCATTCTATAACTGTGAGTTCTTTTTTTTTTTTTTTTGGATCTGAAATCAAATATGTTATTATAGAATTCAAAAGTTCTAACCACAATAACTCCAAACGTTTCACTGAAATTATGGATGCTATATGGAAGCCACAGAAATTCAAGTACATCAACTAGATGGCTATATTGTACGTTTTCACTTTAACGCTTACCTCATTCATCATCGTGTATTGGGCCTTGGTGATGAGCTTCTAAACCACTCTAATGCTTTCACCCTCCTCCCAAAATCCAACTGTTGTGACGTCTCCATCAGCCTTACACTTATTCACCAGGTAAGCTTTCAATTAGAGTTAAAGTGTTTGTGAAAAGTCCCTTGAGAAACAATTTAATAAAATTTCAAATTTCACACTGAAATCTGACCTGGGTTACTTTTTAACTTTTCATTACTTTTGTTGTGCTTCTAAAAAGGTACTCCAAAAATTTAATGGTTTCTTTTATTTCATCAATGATATATTCTCCTAATAGATGATGTTAATCATCCACAACCATTTATACTTTTGTTCAAAATCTTTGAGAATTCGCCCATAAAATTGCTTTTAGAACCATCGCCAACACTTCTTTGGCATGTAACATAAAAATGATGATAGCATTGAGATTGGTCCTTCATTTCATTGCTTTTAGTGAATAGATGTTTCGCAATGGCTCCTTTTTTATTTATTACATTAAGTAATTGCGTTGTAGTCCACTTATAGGGACTAGTTTCATAGTTTCATATATAACAATTTTAAGTCAAAAATTTTGCAGTTCACTTTGGCATGGATCAAGTTGGGCAGACTTGAAATGGCCAAGAAAGCAGTTTGTTTTATGCACAATTGTCTAATGTTAAGTACTTTTCTGCATTGATGACAATTGTATCGAATGATATCTTCTTACCTGGAGCTAATTTATTTGTCAGACTATGGAAACTAATTTGAAGAAAGAAAAATTCATTATGCAAAATATTACCCTTAACCATTTGATAATGATATATCTATCTTGCTTCCTCGAACATTTTTTCCAGGGTTTCGCTTTGTAAATTTGGCATTGCTGGCACGTATTCGGGTGTTAGTTCAACAAGTAAGTTCTATTTTTATTATTTAGTATTTAAGAAAATAGGTATCATTTTACATTTTAGCAATCTTTCGTAGTTAGTATTTAAGTCAAAAACCTATTCCTGCAAATAATTTCCCAAGGATTGTCATTATTATGTAAATTGTAATATAATCACTATTTTCGAATTTTCTGTGTTTATGATGCATTTGTATCTTTTCTCTATTGTGCAGATATTTCTAGATGTTGTTTCAGTATTCAACACAGTTTTATCTATCTCTGAAAAAGAAGCAAGTAGTTGCAATAAACTAGGAAGGAATTCAGGTATTTGTGCTTCACTTTTCCATTTTTTCTCTAAAGTGGAAAGGTTGAATCTACAAAACCAAGGAATTCTTATGCAATCACACTACTGTTCTCGTATCAGCTGCACTTCCAATTATCTTCAAAAAGTAGAAGTTTTAAAGCTTTTTATCGATCCTTTTACAGGTCTTTAGAGAATTTTACCCAACGAATGATGAATTTGTTCTCTTAGAGTGAATTTGGGAAGTAGACAAATTTATTTTGAAAGAGAGAACACAAGAAGTTGCAACTAAGAATCAAGAACATTTTTAGGCCTGATTATTTAGCCACTTCAGCTCTGCAGTATCAGAAACTTAAATATTTTCTTGGAGGTAAGGTTTTTCTTGGTATTTATACCTAGCTCCCTTTACAAATTCTCTTTTCTTAATAGAAGTATATGTGTGAGTTCTTTTAATAAAGAATAAAATATTCCTCTTTGTCAATTGCATTGCTTTGGTAATAAATTATGCTTTTATGTAGTACTTACTAACCGAACAGTCAAACGAAATAGCAACGTCTAATAGCCTCCATTTTTGTATCTTTTAATTCTTTGTACTGCCATCATCTTTAGTTTCATTCATCTTTATCTTGGAAAGAAAAATAAACTCTAGTTTCCATGTTGTATTCCCTCGTTTTAGGTGTAGATGATCTGAGGAGGCACAGGCAAATCAAAGTAATGAGAAAGGTCCGATCTAATGAAAAGACTAAGAATGGTTTGCTAGCAAGCCCATCGGGAAGAGTTAATGATATATCTATGGAAGATAATACAGAAATAAAAGACGGTTTGATCAGTCCGATAAAGGGGAGCAAGAGGTTAAAATATGTAAGGAGCAACTATATGTATGGTTCATTGATATATATGCAATTTGTTAAGATA AAAACTCTTATCTTTTTTCCATCTTCCCCAATTTTCTCCAATCACGATGCTCCCCCTTCACACTACGCGATCTTCCCTCCACCACCCAAGCTCTAGACGGTAGCCGTTCATATACCGCAGTCACTCCCGCTCCACCACAGATCCCAACTCTTCTGTATAGGCACCGCACATGACTGAGGACAGGCTCCGTCTAGAGACACAGACGCTTCACACAGAAGCATAAGCTTCACCAATTTTCTCCGCAGACGCTTCACGCACAGACACCGTGCATGGCTGAGGAATGCTGCAAACCTTCTTGCCACCAACTCCACTTTAAAGTTAGGATACACGTAATAAGGTGTATAATTCAGCCTCATTTGATAACTATTTGATATTTTAAAAAACGAAACTTACAAATACTACTTTTTGTTGATTTGGAATTCAAATGTTTCGTTTTGGAATTCAAATATTTTTCTCTTACAAACAAGAAGCAAGCATAAATTTCAAAAACAACTTAATTTTCTGTTAATTTTTAAATTTTAGGTTGAGGGTGTCAAACACTCTTGCCCTAAGAAATTGATTCTGCATTTCATCGGAGCCACTAACATTCTTTACACATTCGGAGGTCATTCTATAACTGTGAGTTCTTTTTTTTTTTTTTTTGGATCTGAAATCAAATATGTTATTATAGAATTCAAAAGTTCTAACCACAATAACTCCAAACGTTTCACTGAAATTATGGATGCTATATGGAAGCCACAGAAATTCAAGTACATCAACTAGATGGCTATATTGTACGTTTTCACTTTAACGCTTACCTCATTCATCATCGTGTATTGGGCCTTGGTGATGAGCTTCTAAACCACTCTAATGCTTTCACCCTCCTCCCAAAATCCAACTGTTGTGACGTCTCCATCAGCCTTACACTTATTCACCAGGTAAGCTTTCAATTAGAGTTAAAGTGTTTGTGAAAAGTCCCTTGAGAAACAATTTAATAAAATTTCAAATTTCACACTGAAATCTGACCTGGGTTACTTTTTAACTTTTCATTACTTTTGTTGTGCTTCTAAAAAGGTACTCCAAAAATTTAATGGTTTCTTTTATTTCATCAATGATATATTCTCCTAATAGATGATGTTAATCATCCACAACCATTTATACTTTTGTTCAAAATCTTTGAGAATTCGCCCATAAAATTGCTTTTAGAACCATCGCCAACACTTCTTTGGCATGTAACATAAAAATGATGATAGCATTGAGATTGGTCCTTCATTTCATTGCTTTTAGTGAATAGATGTTTCGCAATGGCTCCTTTTTTATTTATTACATTAAGTAATTGCGTTGTAGTCCACTTATAGGGACTAGTTTCATAGTTTCATATATAACAATTTTAAGTCAAAAATTTTGCAGTTCACTTTGGCATGGATCAAGTTGGGCAGACTTGAAATGGCCAAGAAAGCAGTTTGTTTTATGCACAATTGTCTAATGTTAAGTACTTTTCTGCATTGATGACAATTGTATCGAATGATATCTTCTTACCTGGAGCTAATTTATTTGTCAGACTATGGAAACTAATTTGAAGAAAGAAAAATTCATTATGCAAAATATTACCCTTAACCATTTGATAATGATATATCTATCTTGCTTCCTCGAACATTTTTTCCAGGGTTTCGCTTTGTAAATTTGGCATTGCTGGCACGTATTCGGGTGTTAGTTCAACAAATATTTCTAGATGTTGTTTCAGTATTCAACACAGTTTTATCTATCTCTGAAAAAGAAGCAAGTAGTTGCAATAAACTAGGAAGGAATTCAGGTATTTGTGCTTCACTTTTCCATTTTTTCTCTAAAGTGGAAAGGTTGAATCTACAAAACCAAGGAATTCTTATGCAATCACACTACTGTTCTCGTATCAGCTGCACTTCCAATTATCTTCAAAAAGTAGAAGTTTTAAAGCTTTTTATCGATCCTTTTACAGGTCTTTAGAGAATTTTACCCAACGAATGATGAATTTGTTCTCTTAGAGTGAATTTGGGAAGTAGACAAATTTATTTTGAAAGAGAGAACACAAGAAGTTGCAACTAAGAATCAAGAACATTTTTAGGCCTGATTATTTAGCCACTTCAGCTCTGCAGTATCAGAAACTTAAATATTTTCTTGGAGGTGTAGATGATCTGAGGAGGCACAGGCAAATCAAAGTAATGAGAAAGGTCCGATCTAATGAAAAGACTAAGAATGGTTTGCTAGCAAGCCCATCGGGAAGAGTTAATGATATATCTATGGAAGATAATACAGAAATAAAAGACGGTTTGATCAGTCCGATAAAGGGGAGCAAGAGGTTAAAATATGTAAGGAGCAACTATATGTATGGTTCATTGATATATATGCAATTTGTTAAGATA ATGGAAGCCACAGAAATTCAAGTACATCAACTAGATGGCTATATTGTACGTTTTCACTTTAACGCTTACCTCATTCATCATCGTGTATTGGGCCTTGGTGATGAGCTTCTAAACCACTCTAATGCTTTCACCCTCCTCCCAAAATCCAACTGTTGTGACGTCTCCATCAGCCTTACACTTATTCACCAGGTAAGCTTTCAATTAGAGTTAAAGTGTTTGTGA MEATEIQVHQLDGYIVRFHFNAYLIHHRVLGLGDELLNHSNAFTLLPKSNCCDVSISLTLIHQVSFQLELKCL Homology
BLAST of MELO3C033219.jh1.t1 vs. NCBI nr
Match: XP_008455699.1 (PREDICTED: auxin transporter-like protein 5 [Cucumis melo]) HSP 1 Score: 132 bits (333), Expect = 3.03e-38 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. NCBI nr
Match: TYK22614.1 (auxin transporter-like protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 2.16e-29 Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. NCBI nr
Match: KAA0025850.1 (auxin transporter-like protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 69.3 bits (168), Expect = 1.29e-12 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. NCBI nr
Match: KAF2306369.1 (hypothetical protein GH714_017148 [Hevea brasiliensis]) HSP 1 Score: 70.1 bits (170), Expect = 4.49e-12 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. NCBI nr
Match: KDO53259.1 (hypothetical protein CISIN_1g011392mg [Citrus sinensis]) HSP 1 Score: 51.6 bits (122), Expect = 2.23e-05 Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q8L884 (Auxin transporter-like protein 4 OS=Medicago truncatula OX=3880 GN=LAX4 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 1.8e-04 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9LFB2 (Auxin transporter-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=LAX1 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 4.1e-04 Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q9FEL7 (Auxin transporter-like protein 2 OS=Medicago truncatula OX=3880 GN=LAX2 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 4.1e-04 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q5N892 (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0856500 PE=2 SV=2) HSP 1 Score: 43.9 bits (102), Expect = 9.1e-04 Identity = 20/31 (64.52%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy Swiss-Prot
Match: Q8L883 (Auxin transporter-like protein 5 OS=Medicago truncatula OX=3880 GN=LAX5 PE=2 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 9.1e-04 Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy TrEMBL
Match: A0A1S3C2R3 (auxin transporter-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103495810 PE=4 SV=1) HSP 1 Score: 132 bits (333), Expect = 1.47e-38 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5D3DG85 (Auxin transporter-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00390 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 1.04e-29 Identity = 53/64 (82.81%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7SI59 (Auxin transporter-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001230 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.25e-13 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy TrEMBL
Match: A0A6A6M340 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_017148 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.17e-12 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. ExPASy TrEMBL
Match: A0A067EDL7 (Aa_trans domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g011392mg PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.08e-05 Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. TAIR 10
Match: AT5G01240.1 (like AUXIN RESISTANT 1 ) HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05 Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. TAIR 10
Match: AT5G01240.2 (like AUXIN RESISTANT 1 ) HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05 Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. TAIR 10
Match: AT2G21050.1 (like AUXIN RESISTANT 2 ) HSP 1 Score: 41.2 bits (95), Expect = 4.2e-04 Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. TAIR 10
Match: AT2G38120.1 (Transmembrane amino acid transporter family protein ) HSP 1 Score: 40.4 bits (93), Expect = 7.1e-04 Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of MELO3C033219.jh1.t1 vs. TAIR 10
Match: AT1G77690.1 (like AUX1 3 ) HSP 1 Score: 40.0 bits (92), Expect = 9.3e-04 Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|