MELO3C003615.jh1.t2 (mRNA) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.GCTAAAATCGACTCTATGGACTCGGTTTCTTGCTCTATCATGTTTAACTCTCATATCCGGGTTGGGGATCGGACGAATGAGTTTATGGGAGGGCATGAAGACCGGAGATTGCAGCGGCGACCGACGATCAACCTCGTCGGAGCCGTCAAGGAATTGCATAAACAAAGAGAGAGAGAAAAGGAAGGGAGGACCAAGAAAGCGTGTGAAGCAGCTCGGAGGCTGGTTTGAAAGACAAAGATGGTCAGTGTAGATTTGTTCTGGCACTTGAAACATATATTTTTTTCTCTTCACTGGTTTTCACGAATTTTCGTTTTGTAGCTGAGATTCCGATGTTGAAAAGTCGAAGATACAAAGAAATTATAGGTTCTTTGTTCACGATGTCCAAATTACTGCAAGCTAGCGATTTATATATGTTTGCTCGTTTTCGAGGATTTTACTGTTGAACTTTCAGGATTGAGTAAAATGTAGTTGTTGATACTTTTGAAATTCGACGTGTTTGATTATCTGAAATGTGGTCGTGACAATTATAGCTTTTGATTATTTTTTGAGGATGGATTAAGTGAAATTTAGTTGATTGACATTTACATTCAAATTGGATTTGCTTGATGATACGAAATGGGTTTGGGGTGATTAATGATTTGTTTGTTTGCCAAATTTGTTTATGTAGATTGAAGATTTTGTCGAGATTGAGATTGTTATCCAGCTGATTACTTATACAGAATTCTCGATATCTAATGGATGGACAGTCTCAAGACTATGCAGCTGCTTCTACTACGGCTGCTTATGCACAACAGCGACGACAAACAACTAATATGCAACAACAGCTGCCGTTTGTAATCTTCATGGCCAACATCAACAATATCCTCCATCTGTTCCAGGTCTCTCTTTCCTACCGCCAATCCTGTTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAACCACAACTTCATCCATATCATCCACCCCACCCCACCCTCACCTTCTTCATCTTCAACAGCAGCAGCAGCCACCACCAGCTTTTGCTCCTCATTTACCCCCTCCCATGGGTCCTTCACCTTTCCACGGTCCCTATGATTCTGCTCCTCCACCACCAGTCCCACCTCCTTCAGACCTCAAGCTCCAAAAACGGATAGACAAACTCGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGAGAAAAACAACAGGACAATCCAACATATGGCTTTCTCTTTGGTGGGGAGGGGAAAGGTTACTATCGTTATAAGCTTTGGCTAATGACTCGCCCCCATCTTGGAGAACCCTTCAATTCTCCCTTTCCATCTTCATCCGTGGCCATGTTGCACCCTCGTCCAAATCCTGTTACAAGTCCACCCCCCCAATGCTTCTCCGTTGAATGCTTCTGCATCAATAATTGGGGGAGCTCAAATGCATGAAACTCCTTTTGCTTCTTTCTATGAGCAGCAGCAGCACCGTCAACAGGCTTTCAGTATCCCTGGTCGGTCAGATTATGATCAATCTTCAAAATCTTTTAAAGGGCTTTCTGGACCTCTTCCTTCTTATGTTGCTTTGGAGCTCAACAATGTGCCCAGCAACCTTACTGGGACAAAAGAATCCATTGAACGTGCTAAAACTTGGTTCATGCAGTGGTCTCCTCTTGCACCAACCTTACTGGGACAAATGCTTTGGCACTTAGAGACATGATTTTTAACATAGATGATTCTGTGAAGCAACTTCTTATATATACCTTGTCAATGACATTCTTTTTGAGAGGTGCGCAACCATATGATTGCTTCTGTTATTGTTATTTGAATATTATAATTTCTTGGTTTGGTGCATTCAGCTTGCTTAAGTTCTTAATGTTGCTGAATACTGCTTAAAGTTTTATTTTCTGGAACAAATAATTTAACTGCTCTTGAAGTGAGGGATGTTCTCTCCTTCTGGCTTCTTAAATAGAATTAGATCTGATGACGAGTTTTTTTTAGAAGCTCTATTCAATAAATTATCATTTGCATTAACCAACTAATCTGATAGCAGTCCAACAATATAATAATTCGAGGTGTATTAGTTTTTTCTCATTAATTTTTCTTCCAAAATTTTCAGCATGATGCAAAGAATCAATTCAAAGGACCTTGACAATGAAGCTCTAGCATTCAAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGGCAATTGAAATTACAGAAGTTGATACAGTTCTAGGCGTCTAAGGAGATTTATGATAAGGATACTGTTAACGCACTTGAAGGTGAAATGATTAGTGAGATTCCTACTAAAGCTTTGCCAGGGCATCCAAAAGAGCTATCTGCTACAGTAGATTCAGCTGCTGGTAGGTTTTTGGCTTTCTTTTTTGTATGGCTTCACTTATGTTCTCATTTGCAGAGTGCTTTTGTGAGAAAATGATATTTTCAAGTCAAATGGGTAAAATCTTTGTTAAACTTTTTCTTGGTGCCATGCAGGATTGGCACAGCATACAAACAACCACGCCATGAACCTGTGGCAACCTGATAGGCAATGCACCATTCCAAGTTTTCCTGATCAAGAGCACCCAGATAAGGCCGTTTCCTCAGGCCAGGCGCTGCCAAGATCTGTGACGCCACAAAAATTTCTACCAAGTACAATACCCACAGCTGATTTTGTAAGCTCCATTCCTTTGTCCTATTCAACCACCAAACCAACAACCCAATGCCCAATTAATGCCTGCTGCTGTGGGTGAAAAATTGCGACCATATCTTTTGTTCCCTCCTGGTCTTATTCCTCGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTTCCATGAACCCTTTGGATATTCCAACTTTAATTCCTCCATCCAATATATCTCCCTTTGAAGTTCTTGAGAGAGTGTCTAAGTGGTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTTTGATGGCAAAGACAATGTATATACTTCTTATAGAAAACAAAGAAGTACCAATTTTCACTCCTCTACGAGCGCAAGGCCCACAACAAAGTGAAAAGAAACAGTTCAATTCATTACTAGGAGTGACCTCATAGCTTGGAACATGTAACATACCAACCTTTATCTGTTTTCTTCTAAGTTTTGCTGGATTTGTCCATCATTATTAGGTCATTAGCATCGGACTCAACCAGTTTAACTGTGCATTTAGTTTTGATCTAAAGAATCATTCTCGAAAAGACATAAGTTACAAATTGAGACTCAGTTTTCTTTTTGGATTTGGACATCTCGAGTAAATTGAACAGTGAGTTT GCTAAAATCGACTCTATGGACTCGGTTTCTTGCTCTATCATGTTTAACTCTCATATCCGGGTTGGGGATCGGACGAATGAGTTTATGGGAGGGCATGAAGACCGGAGATTGCAGCGGCGACCGACGATCAACCTCGTCGGAGCCGTCAAGGAATTGCATAAACAAAGAGAGAGAGAAAAGGAAGGGAGGACCAAGAAAGCGTGTGAAGCAGCTCGGAGGCTGGTTTGAAAGACAAAGATGATTGAAGATTTTGTCGAGATTGAGATTGTTATCCAGCTGATTACTTATACAGAATTCTCGATATCTAATGGATGGACAGTCTCAAGACTATGCAGCTGCTTCTACTACGGCTGCTTATGCACAACAGCGACGACAAACAACTAATATGCAACAACAGCTGCCGTTTGTAATCTTCATGGCCAACATCAACAATATCCTCCATCTGTTCCAGGTCTCTCTTTCCTACCGCCAATCCTGTTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAACCACAACTTCATCCATATCATCCACCCCACCCCACCCTCACCTTCTTCATCTTCAACAGCAGCAGCAGCCACCACCAGCTTTTGCTCCTCATTTACCCCCTCCCATGGGTCCTTCACCTTTCCACGGTCCCTATGATTCTGCTCCTCCACCACCAGTCCCACCTCCTTCAGACCTCAAGCTCCAAAAACGGATAGACAAACTCGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGAGAAAAACAACAGGACAATCCAACATATGGCTTTCTCTTTGGTGGGGAGGGGAAAGGTTACTATCGTTATAAGCTTTGGCTAATGACTCGCCCCCATCTTGGAGAACCCTTCAATTCTCCCTTTCCATCTTCATCCGTGGCCATGTTGCACCCTCGTCCAAATCCTGTTACAAGTCCACCCCCCCAATGCTTCTCCGTTGAATGCTTCTGCATCAATAATTGGGGGAGCTCAAATGCATGAAACTCCTTTTGCTTCTTTCTATGAGCAGCAGCAGCACCGTCAACAGGCTTTCAGTATCCCTGGTCGGTCAGATTATGATCAATCTTCAAAATCTTTTAAAGGGCTTTCTGGACCTCTTCCTTCTTATGTTGCTTTGGAGCTCAACAATGTGCCCAGCAACCTTACTGGGACAAAAGAATCCATTGAACGTGCTAAAACTTGGTTCATGCAGTGGTCTCCTCTTGCACCAACCTTACTGGGACAAATGCTTTGGCACTTAGAGACATGATTTTTAACATAGATGATTCTGTGAAGCAACTTCTTATATATACCTTGTCAATGACATTCTTTTTGAGAGCATGATGCAAAGAATCAATTCAAAGGACCTTGACAATGAAGCTCTAGCATTCAAACCAGTTTTAGGTTCCATGCTTGCAAGAGTATATCACAACCCTCAAATGAAGGAGGAAAGGCAATTGAAATTACAGAAGTTGATACAGTTCTAGGCGTCTAAGGAGATTTATGATAAGGATACTGTTAACGCACTTGAAGGTGAAATGATTAGTGAGATTCCTACTAAAGCTTTGCCAGGGCATCCAAAAGAGCTATCTGCTACAGTAGATTCAGCTGCTGGATTGGCACAGCATACAAACAACCACGCCATGAACCTGTGGCAACCTGATAGGCAATGCACCATTCCAAGTTTTCCTGATCAAGAGCACCCAGATAAGGCCGTTTCCTCAGGCCAGGCGCTGCCAAGATCTGTGACGCCACAAAAATTTCTACCAAGTACAATACCCACAGCTGATTTTGTAAGCTCCATTCCTTTGTCCTATTCAACCACCAAACCAACAACCCAATGCCCAATTAATGCCTGCTGCTGTGGGTGAAAAATTGCGACCATATCTTTTGTTCCCTCCTGGTCTTATTCCTCGAATGGTGAGAAAAATGCAGATTGGAAGTGGAGTCCCATATTCTTCCATGAACCCTTTGGATATTCCAACTTTAATTCCTCCATCCAATATATCTCCCTTTGAAGTTCTTGAGAGAGTGTCTAAGTGGTTTAAAGAGATTGGTGAGGTTAATCCCTCAGAAGGACCCATGAGTTTTGATGGCAAAGACAATGTATATACTTCTTATAGAAAACAAAGAAGTACCAATTTTCACTCCTCTACGAGCGCAAGGCCCACAACAAAGTGAAAAGAAACAGTTCAATTCATTACTAGGAGTGACCTCATAGCTTGGAACATGTAACATACCAACCTTTATCTGTTTTCTTCTAAGTTTTGCTGGATTTGTCCATCATTATTAGGTCATTAGCATCGGACTCAACCAGTTTAACTGTGCATTTAGTTTTGATCTAAAGAATCATTCTCGAAAAGACATAAGTTACAAATTGAGACTCAGTTTTCTTTTTGGATTTGGACATCTCGAGTAAATTGAACAGTGAGTTT ATGGATGGACAGTCTCAAGACTATGCAGCTGCTTCTACTACGGCTGCTTATGCACAACAGCGACGACAAACAACTAATATGCAACAACAGCTGCCGTTTGTAATCTTCATGGCCAACATCAACAATATCCTCCATCTGTTCCAGGTCTCTCTTTCCTACCGCCAATCCTGTTATGCAACAGTTCCCTTATCACCACCCTATGCAGCAGCAACCACAACTTCATCCATATCATCCACCCCACCCCACCCTCACCTTCTTCATCTTCAACAGCAGCAGCAGCCACCACCAGCTTTTGCTCCTCATTTACCCCCTCCCATGGGTCCTTCACCTTTCCACGGTCCCTATGATTCTGCTCCTCCACCACCAGTCCCACCTCCTTCAGACCTCAAGCTCCAAAAACGGATAGACAAACTCGTGGAGTATATCATAAAGAATGGCCCTGAATTTGAATCCATGATACGAGAAAAACAACAGGACAATCCAACATATGGCTTTCTCTTTGGTGGGGAGGGGAAAGGTTACTATCGTTATAAGCTTTGGCTAATGACTCGCCCCCATCTTGGAGAACCCTTCAATTCTCCCTTTCCATCTTCATCCGTGGCCATGTTGCACCCTCGTCCAAATCCTGTTACAAGTCCACCCCCCCAATGCTTCTCCGTTGAATGCTTCTGCATCAATAATTGGGGGAGCTCAAATGCATGA MDGQSQDYAAASTTAAYAQQRRQTTNMQQQLPFVIFMANINNILHLFQVSLSYRQSCYATVPLSPPYAAATTTSSISSTPPHPHLLHLQQQQQPPPAFAPHLPPPMGPSPFHGPYDSAPPPPVPPPSDLKLQKRIDKLVEYIIKNGPEFESMIREKQQDNPTYGFLFGGEGKGYYRYKLWLMTRPHLGEPFNSPFPSSSVAMLHPRPNPVTSPPPQCFSVECFCINNWGSSNA Homology
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: KAA0038745.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis melo var. makuwa]) HSP 1 Score: 432 bits (1112), Expect = 4.78e-151 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: TYK31358.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis melo var. makuwa]) HSP 1 Score: 403 bits (1036), Expect = 1.25e-139 Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: XP_004148173.1 (calcium homeostasis endoplasmic reticulum protein [Cucumis sativus] >KGN50691.1 hypothetical protein Csa_005819 [Cucumis sativus]) HSP 1 Score: 291 bits (746), Expect = 6.52e-91 Identity = 158/225 (70.22%), Postives = 165/225 (73.33%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: KAA0035891.1 (calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo var. makuwa] >TYK19046.1 calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 288 bits (738), Expect = 1.01e-89 Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. NCBI nr
Match: XP_008454822.1 (PREDICTED: calcium homeostasis endoplasmic reticulum protein-like [Cucumis melo]) HSP 1 Score: 288 bits (738), Expect = 1.12e-89 Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q8IWX8 (Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens OX=9606 GN=CHERP PE=1 SV=3) HSP 1 Score: 72.8 bits (177), Expect = 5.8e-12 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy Swiss-Prot
Match: Q8CGZ0 (Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Cherp PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.6e-12 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7TBI9 (Calcium homeostasis endoplasmic reticulum protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002950 PE=4 SV=1) HSP 1 Score: 432 bits (1112), Expect = 2.32e-151 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5D3E6C6 (Calcium homeostasis endoplasmic reticulum protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006620 PE=4 SV=1) HSP 1 Score: 403 bits (1036), Expect = 6.05e-140 Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A0A0KSG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G215110 PE=4 SV=1) HSP 1 Score: 291 bits (746), Expect = 3.16e-91 Identity = 158/225 (70.22%), Postives = 165/225 (73.33%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A5A7T2P6 (Calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00010 PE=4 SV=1) HSP 1 Score: 288 bits (738), Expect = 4.87e-90 Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. ExPASy TrEMBL
Match: A0A1S3BZ08 (calcium homeostasis endoplasmic reticulum protein-like OS=Cucumis melo OX=3656 GN=LOC103495133 PE=4 SV=1) HSP 1 Score: 288 bits (738), Expect = 5.44e-90 Identity = 157/225 (69.78%), Postives = 164/225 (72.89%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT4G31200.2 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein ) HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39 Identity = 107/219 (48.86%), Postives = 127/219 (57.99%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT4G31200.3 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein ) HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39 Identity = 107/219 (48.86%), Postives = 127/219 (57.99%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT4G31200.1 (SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein ) HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39 Identity = 107/219 (48.86%), Postives = 127/219 (57.99%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT5G23080.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein ) HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06 Identity = 27/76 (35.53%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of MELO3C003615.jh1.t2 vs. TAIR 10
Match: AT5G23080.2 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein ) HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06 Identity = 27/76 (35.53%), Postives = 40/76 (52.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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