MELO.jh030284.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030284.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr02: 1865636 .. 1867838 (-)
RNA-Seq ExpressionMELO.jh030284.1
SyntenyMELO.jh030284.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTCATTTTTTTTTTTTTAAATTTCCCATTTTCTTGTTCTTCCATATTCAATCTTCGAGGAATCGTTGGTAAGATATCCATTTTCTTCTGGGTCCTCTCTCTTTTTTCTCTTAGCATTTATAATCTCATCTTTCATTTCTGACTTCAAACTGTTTGATGAAATGCTTGTTTAGCATTATAATGTGATCCACCGCCATTTTTTCACATACGAGTTTGACCACCAATAATATCTTATCTTCTTTATTTTATTTTATTTTATATATATTGTTTTGTTTCATCATCTGTCACGTCCTTCCCCCATTCCCCACTTGAATGCTGCTGCTTGCCAAAATCTTTGCTTGCTTCCCAACTTGCATTTTTTAGCTGTTTGATTCATCACCGTCCTTTTGATTCTGTGCCCACTCAAGTTTTTGATCTTATTCTATTTGCCATTTTGTTTCATTGTTTTCTGGGCAGTTCTTGCATTGGGTTTCTCCCCATTGTCATTTTTTGTTATATAATTTTACCTCAAGTCTGACTCCCATTGTGTTTTTGTATTACTCTGTTGAAAAAACCCTTTATCTATTGGTTAACTGGCCTGCCCAGTCCTATATTTAGAAGGTTTAGCTGGAGCTTGAACGTTGTCCTTTAAAAGAAAAAGGAAAAAGGATTGAATTTTTGTTTTCTTGTATGGATCTGTTTCTTGAAATATCTTTTTAATGTCAAACCAATTTGGAATATCAGGGGAATGATTGAGCTGGTTCATATTAATTTTTAGCCAAAACTTGACAACTAAGGAGTCGTGTATGTAACAAGCACTCACTAGCGACACAAATGGTTGTGATTAAGAAATATTACCTTCCCATATTTCCTTCTTGCTTGAAGGTTTTGTTTTGTACATTAGACTGTAACTAGTGAGAACAATAATTGTGAATGAAAAATATAAGAAACTATGATCTCGCCTTTATTGTTCTTTATTTTAGGATTTTCTTAAATGAAATGAATGTATACATTAATTAATCAATAAAATAATTTCTTAATTCTTACCTGTTACAGAGCTGTGAAGATCACTTAGAGGGAAAAAAACTTATAAACACACTTTTTCAGAAGAGACACCTAACAGACACCTTAAACATACTAAAATGTAATATCTTTATTTCATGTAATTTGTCGCTTTTCTGACAACACAATTGAGAACTAATTTCCATTTCAGAAAACCAAAAATAATATCATACAAAATATTCTCTTTCTGATGGGAGTATTAATCATTAGGAACTCCTAAATTATCACTATGATGCTTAATTAATTTTAAAAAATTATGTGATCCAAGAACCTCCACACCACAGGCATGTCAAAAGAGGGAGTGAGTCAAGCCCTTTAGGCTAATAATGATTAATTATATTGTACATGATTTGATTTTGTATCCCATTTTCTTTTCCAGCCAAACCCAACCAGGCTGGCTTGCCGTTTGCCAACAGAGTCTATGAGCTTGTGCATTGGGACTCATGAAAATGGGGTTTTGTATAAATTAGGATTCTTTTGTTTTCGTTCTCTCTCTCTCTCTCTTTTGTGGATCAGAGAAAGGCCTCGAAACTTCAACCAACCACATGATTGATTGATTGTCTTCTCTGCTTTTCTTTCTTCACAAACAAAAGCAGATTTTCTTTTAAAAAATTGAAGGATCTTCTTCTGCAGACTGCATGCATGCATAAACATGACTGCACAACAAATGATGAATTTATATATAAACATAGAGAGAGAGAGAGAGAGAGAAGCATGGTAGTGTCCTTTTCTTCTTCTTCTTAGAGAGAGAAGCATGTTAGTGTCCTTTTCTTCTTCTTCTTCTTCACATTTCATTAATTATATTTTGTTTGTATTTTTTTTGCAGAGTTTTAGCAAATGGCAATTGCCATGCGTGATATGCCAATTGTATTTCTGCTGTCCCATTCTAATATATTAAAGTGGCAACTTGGCACTATCTTCTTTGGCTGCTGTAACTGTGTAAAAACCGAAAGGGGGAAAATCTAAGGTCACATGCTCAAATCTTACTGGTCAACAGCTGCTCTGAGAGGTGTCAAAGAAAAATATGGGTAGAAAATTTGTTTCAATTCAATTCAAACTATTTTTAGTTGTTTAGTCGTGATTTTACAAAGACGGAATTGACAATCATAAACTTCTATCAACGGTGTTTATCATTAATAAAATTTAAAATAATTTTGATA

mRNA sequence

TTTGTCATTTTTTTTTTTTTAAATTTCCCATTTTCTTGTTCTTCCATATTCAATCTTCGAGGAATCGTTGAGTTTTAGCAAATGGCAATTGCCATGCGTGATATGCCAATTGTATTTCTGCTGTCCCATTCTAATATATTAAAGTGGCAACTTGGCACTATCTTCTTTGGCTGCTGTAACTGTGTAAAAACCGAAAGGGGGAAAATCTAAGGTCACATGCTCAAATCTTACTGGTCAACAGCTGCTCTGAGAGGTGTCAAAGAAAAATATGGGTAGAAAATTTGTTTCAATTCAATTCAAACTATTTTTAGTTGTTTAGTCGTGATTTTACAAAGACGGAATTGACAATCATAAACTTCTATCAACGGTGTTTATCATTAATAAAATTTAAAATAATTTTGATA

Coding sequence (CDS)

ATGGCAATTGCCATGCGTGATATGCCAATTGTATTTCTGCTGTCCCATTCTAATATATTAAAGTGGCAACTTGGCACTATCTTCTTTGGCTGCTGTAACTGTGTAAAAACCGAAAGGGGGAAAATCTAA

Protein sequence

MAIAMRDMPIVFLLSHSNILKWQLGTIFFGCCNCVKTERGKI
Homology
[Close]
BLAST of MELO.jh030284.1 vs. NCBI nr
Match: XP_022960600.1 (uncharacterized protein LOC111461334 [Cucurbita moschata])

HSP 1 Score: 46.6 bits (109), Expect = 2.07e-04
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 0 

Query: 14  LSHSNILKWQLGTIFFGCCNCVK 36
           +SHS+ILKWQLGTIF GCCN VK
Sbjct: 103 MSHSHILKWQLGTIFSGCCNGVK 125

[Close]
BLAST of MELO.jh030284.1 vs. NCBI nr
Match: KAG7023641.1 (hypothetical protein SDJN02_14667, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 46.6 bits (109), Expect = 2.47e-04
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 0 

Query: 14 LSHSNILKWQLGTIFFGCCNCVK 36
          +SHS+ILKWQLGTIF GCCN VK
Sbjct: 17 MSHSHILKWQLGTIFSGCCNGVK 39

[Close]
BLAST of MELO.jh030284.1 vs. ExPASy TrEMBL
Match: A0A6J1H9J3 (uncharacterized protein LOC111461334 OS=Cucurbita moschata OX=3662 GN=LOC111461334 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.00e-04
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 0 

Query: 14  LSHSNILKWQLGTIFFGCCNCVK 36
           +SHS+ILKWQLGTIF GCCN VK
Sbjct: 103 MSHSHILKWQLGTIFSGCCNGVK 125

The following BLAST results are available for this feature:
BLAST of MELO.jh030284.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960600.12.07e-0482.61uncharacterized protein LOC111461334 [Cucurbita moschata][more]
KAG7023641.12.47e-0482.61hypothetical protein SDJN02_14667, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of MELO.jh030284.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh030284.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H9J31.00e-0482.61uncharacterized protein LOC111461334 OS=Cucurbita moschata OX=3662 GN=LOC1114613... [more]
BLAST of MELO.jh030284.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030284.1.t1MELO.jh030284.1.t1mRNA