Cp4.1LG17g01830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAATCGCAGAGACGACCCTCCGCCACCGCCTCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATTAGCCGCTCCGATTGGAAGGTCGCCATCCCTCTCCTATCGCCGCTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGAGCGATTTCTTCTTCTCATCATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCTTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTCGTACCCGTTTAG ATGGCCGAATCGCAGAGACGACCCTCCGCCACCGCCTCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATTAGCCGCTCCGATTGGAAGGTCGCCATCCCTCTCCTATCGCCGCTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGAGCGATTTCTTCTTCTCATCATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCTTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTCGTACCCGTTTAG ATGGCCGAATCGCAGAGACGACCCTCCGCCACCGCCTCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATTAGCCGCTCCGATTGGAAGGTCGCCATCCCTCTCCTATCGCCGCTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGAGCGATTTCTTCTTCTCATCATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCTTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTCGTACCCGTTTAG MAESQRRPSATASRKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGAISSSHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV Homology
BLAST of Cp4.1LG17g01830 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07 Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. NCBI nr
Match: XP_023515028.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219 bits (559), Expect = 5.74e-72 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. NCBI nr
Match: KAG6593848.1 (putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026180.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 210 bits (534), Expect = 4.26e-68 Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. NCBI nr
Match: XP_022930471.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 207 bits (528), Expect = 3.18e-67 Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. NCBI nr
Match: XP_023000559.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 205 bits (522), Expect = 2.79e-66 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. NCBI nr
Match: XP_038875425.1 (uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 162 bits (409), Expect = 4.16e-49 Identity = 91/113 (80.53%), Postives = 95/113 (84.07%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. ExPASy TrEMBL
Match: A0A6J1ER11 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111436912 PE=4 SV=1) HSP 1 Score: 207 bits (528), Expect = 1.54e-67 Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. ExPASy TrEMBL
Match: A0A6J1KKB8 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494801 PE=4 SV=1) HSP 1 Score: 205 bits (522), Expect = 1.35e-66 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. ExPASy TrEMBL
Match: A0A1S3CDB1 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1) HSP 1 Score: 159 bits (402), Expect = 3.87e-48 Identity = 93/128 (72.66%), Postives = 98/128 (76.56%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. ExPASy TrEMBL
Match: A0A0A0LLJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1) HSP 1 Score: 144 bits (363), Expect = 2.54e-42 Identity = 80/106 (75.47%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. ExPASy TrEMBL
Match: A0A6J1CA35 (uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111009774 PE=4 SV=1) HSP 1 Score: 132 bits (332), Expect = 8.46e-38 Identity = 81/115 (70.43%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 7.1e-11 Identity = 47/112 (41.96%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 1.0e-09 Identity = 47/115 (40.87%), Postives = 60/115 (52.17%), Query Frame = 0
BLAST of Cp4.1LG17g01830 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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