Cp4.1LG11g08320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g08320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionRibosomal RNA small subunit methyltransferase G
LocationCp4.1LG11: 6828650 .. 6831589 (+)
RNA-Seq ExpressionCp4.1LG11g08320
SyntenyCp4.1LG11g08320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAACAAACGCCATTAACAAACACAAACACAAACACAAATTCACTGAATTCCATATACTCTCACATTTTTTCACCCATCAAATATCTCCACAACAATCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCGATGGCCCCGTTGGTCCAAACCAATTTCCATTCCCATCAAATCCGTAAATCAACCAAACAAAATCCCTCCATCTCTCTCTCTCTCTCTCTCTTCCCTAAATCAACCAACTTCCCTCAATCCCCCCTCTCTTTTTCGTTTTCTTCTAGGTTTAACTTCTTCTTCAATCCCTCCATCCTTTCCATTTCCTCTCTTTCAATCGGATCAACAAACCTCCAAAACCGGAGGCGCGCGGTTTGTTCCAGACACCGATGATCGGAATCAATCATCCAGGTCTCTTGCAGGATTACGCCGAGCTGCACAATGTAATATGTTCTTTTATGCATTTTTTCCCCCTGTTTTGATCTCTTCTTTTCATACGTTTCATCCTTACGACTTCTTGTTCTTCGATTATTGTTGTTTTTTCCTTGTTCATTTGCTGCTGAATTTGGTCTCAGATATTAGAAATTGTTTGGATTTTATTTGGTTGCTGAGAAAATTGTGAATTACTGAAATATTGCTTTTGATGTTTGTGTTAATTTTTGGTGTCTTTGAATGCTAAAACAACCTTAGACTTCGACAAATTTGTACGTATCCTGGCCCGGCCACCTCAACTAATGCATATATTCTCGACCAAGAAGTTAAACATTCGAACCATTCCACGTGTTTTGTTTTGTGTTTAGTGTTCAAATCATGGTGGCTTCTTCAGATAATTTGCCTTCTTCTGTAATTGCCTACAAGTTGTAAGTTCATACGACTTTGTGATCACGTGTTCATATCGTGGTGGCAAGTTACACGTGGGATAATAAACATGTTGTAGGGTTAGTTTTTTGATCTCGTCGAGTGAGATTAGTTGAGATTCGAGGAACTATGAATGTTTCAAACTACTGTTCATAAGTTATAAATTCAAATGTAGACTAGGCGTCTCTAGCGGGGCCTAGTCTAAATTAGTCGAGGTAAGAGTTCGGCCTCTTGGCGGGCCTAGTCTAAATTAGTCGAGGTACGAGTTATAGGGTTGGTTAGTTTTTTTATGCTCGTCGAGTGAGATTAGTCGAGGTACGAGTAAGTATGAATGTTTCAATCTACCGTCTATAAGTTATAACTTCAAATTTAGACTAGGCCTCTCTAGCGGGGCCTAGTCTAAATTAGTCGAGCTACGAGTTATAGGGTTACTTTTTTAATCTTGTCGAGTGAGACTAGTCGAGGTATGAGGGCCTTCTCTAGCAAGGCCTAGTCTAAATATTCTAGGCAGTTAGGGTTACATTTTTAATCTCGTTTCAATCTACCGTCTATATTTTATAACTTCAAATTTAGACTAGGCCTCTCTAGCAAGGCCTAGTCTAAATTAGTCGAGGTACAAGTTATAGGGTTACTTGATCTCGTCGAGTGAGATTAGTCGAGCTATGAGTAACTACAAATGTTTCAATCTACTGTCCATAAGTTATAACTTCAAATTTAGAACTAGGCCTCTCTAGTGGGGCGCTCGGGCTCTCTGAAACATCTACTGTCCATAAGTTATAACTTCAAATTTAGAACTAGGCCTCTCTAGTGGGGCGCTCGGGCTCTCTAGTGGGGCGCTCGGGCACTTAGCATAACTCGGAGAAACTTCATATATAGAACTTGACCAATTGAATCATTTTCATTTCAGGAAACAGAAGCATTGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTCGACCCTTTTGGCTGAAGTTCGGTATAGTTTAGAACCATTCTTCTCCTTTAATGTTGTGAATTTCTATGAGGAATCTGTTAATGTTGTGAATTGAGTCATGTTTATTTCCATTCTCCTTTAGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGGCTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCGAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTCGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAGTATACTCCATTATTTTCCTATTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTGCCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGGTACCTATGATGACTCCGAATCTTGTTTCTTATAGTTAAATACATTTGCTCTCAGTTTTTTAACATATGTTTCTTGCTTCAGAGGGAGGAAGAAGAATTGCAGGTGGGTTTCGAACCACTAAGAAAGGAGGACGACGATGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCCATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGAAATTCTCTCTTCATTTGCCTGTGGGAAATTAACTGGGCTTCCTTGAAATTCCATTGTTATTATTATTTTATATAGTTCTCACTCGGCTCGAGAAAATTACGACCCTACAATGTTTGTCAATAGAAAGTTCGATAAGGTTCTTAGGAACGACTTTCTAAGTGCTTAAGAAGAGTTTTTTAAGTATTAGAAAGAAACTCTTAAGCACGTGGAAAGTCATTCCGAATGTACCTTATTTTTGAAGTATATCTAACGTCGCAAGTTTGGGTTATCATCAAAACTGTGATCTTGACGATGTCTAAATTACGATTTTTTTCATCTTAGGTACTCAGACGTTGATAGCGGTGG

mRNA sequence

TGCAAACAAACGCCATTAACAAACACAAACACAAACACAAATTCACTGAATTCCATATACTCTCACATTTTTTCACCCATCAAATATCTCCACAACAATCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCGATGGCCCCGTTGGTCCAAACCAATTTCCATTCCCATCAAATCCGTAAATCAACCAAACAAAATCCCTCCATCTCTCTCTCTCTCTCTCTCTTCCCTAAATCAACCAACTTCCCTCAATCCCCCCTCTCTTTTTCGTTTTCTTCTAGGTTTAACTTCTTCTTCAATCCCTCCATCCTTTCCATTTCCTCTCTTTCAATCGGATCAACAAACCTCCAAAACCGGAGGCGCGCGGTTTGTTCCAGACACCGATGATCGGAATCAATCATCCAGGTCTCTTGCAGGATTACGCCGAGCTGCACAATGAAACAGAAGCATTGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTCGACCCTTTTGGCTGAAGTTCGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGGCTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCGAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTCGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAGTATACTCCATTATTTTCCTATTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTGCCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGAGGGAGGAAGAAGAATTGCAGGTGGGTTTCGAACCACTAAGAAAGGAGGACGACGATGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCCATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGAAATTCTCTCTTCATTTGCCTGTGGGAAATTAACTGGGCTTCCTTGAAATTCCATTGTTATTATTATTTTATATAGTTCTCACTCGGCTCGAGAAAATTACGACCCTACAATGTTTGTCAATAGAAAGTTCGATAAGGTTCTTAGGAACGACTTTCTAAGTGCTTAAGAAGAGTTTTTTAAGTATTAGAAAGAAACTCTTAAGCACGTGGAAAGTCATTCCGAATGTACCTTATTTTTGAAGTATATCTAACGTCGCAAGTTTGGGTTATCATCAAAACTGTGATCTTGACGATGTCTAAATTACGATTTTTTTCATCTTAGGTACTCAGACGTTGATAGCGGTGG

Coding sequence (CDS)

ATGATCGGAATCAATCATCCAGGTCTCTTGCAGGATTACGCCGAGCTGCACAATGAAACAGAAGCATTGAAGGAGAAACTGTTGATCTTGAAGCAGAAAAAGTCGACCCTTTTGGCTGAAGTTCGCTTTTTGAGGCATAAATATGAACTCTTGAAGAACCACCCTGAAACTCAACCAAAGGCTGGTTTCAAGCTGCCACAGAACCTTAAAATCCGACCTCCCGTCTCAAAGAAAGAAAATCGTTCTCGAAAAAGAGAAGCTCGTAACTTAAACCGAAGGGGAGGAATCTCCGATGGGACGGAAGCCACCACTCGAAAAGCTCGGTCGGTTTGCGACGTAAACCAGAAGTCAAGGATGTGCAGCAAGAAGGAAATGAGTATACTCCATTATTTTCCTATTGTTAGCCAGAAAGAGAGAGTATACAGAGCACATGAAGTTGCTGCCAATACGAACATGACCCCGGTGTTCGATCTTAACCAGATCTCGAGGGAGGAAGAAGAATTGCAGGTGGGTTTCGAACCACTAAGAAAGGAGGACGACGATGACGAGCTGAAGAATATCTGTTCGAGAAGCGAAGTCGATGCGAAGAACAGTGACTTGATGGTGTCGTCCATGTGTAGGAATGTTGGCAATGGATCAAACAGAGCAGGAAAAAGGAAGATCTCATGGCAAGACCGAGTGGCATTAAGAGCTTGA

Protein sequence

MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPKAGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Homology
BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match: XP_023546781.1 (uncharacterized protein LOC111805783 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449 bits (1156), Expect = 4.25e-159
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
           AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC
Sbjct: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD
Sbjct: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180

Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231

BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match: KAG7030088.1 (hypothetical protein SDJN02_08435 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430 bits (1105), Expect = 2.72e-151
Identity = 221/233 (94.85%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MIGINHPGLLQDYA+LHNETEA+KEKLLIL QKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIGINHPGLLQDYAQLHNETEAMKEKLLILNQKKSTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
            GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDGTEATTRKARSVCDVNQKSRMC
Sbjct: 61  LGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGTEATTRKARSVCDVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEMS+LHYFPIVSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR E+D
Sbjct: 121 SKKEMSVLHYFPIVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTEED 180

Query: 181 DD--ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           DD  ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 DDNDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 233

BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match: XP_022999758.1 (uncharacterized protein LOC111494012 [Cucurbita maxima])

HSP 1 Score: 424 bits (1089), Expect = 6.95e-149
Identity = 217/231 (93.94%), Postives = 224/231 (96.97%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MI INHP LLQDYAEL NETEA+KEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIRINHPPLLQDYAELQNETEAMKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
            GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDG EATTRKARSVC+VNQKSRMC
Sbjct: 61  VGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGMEATTRKARSVCNVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEMSILHYFPI+SQKERVYRAHEVA NTNMTPVFDLNQISREEEELQVGFEP+R ED+
Sbjct: 121 SKKEMSILHYFPIISQKERVYRAHEVATNTNMTPVFDLNQISREEEELQVGFEPIRTEDE 180

Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           +DELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 NDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231

BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match: XP_022946544.1 (uncharacterized protein LOC111450577 [Cucurbita moschata])

HSP 1 Score: 420 bits (1080), Expect = 1.58e-147
Identity = 217/231 (93.94%), Postives = 221/231 (95.67%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MIGINH GLLQDYAELHNETEA KEKLLILKQKK TLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
            GFKLPQNLKIRPPVSKKENRS+KREARNLNRRGGISDGTEATTRKAR VCDVNQKSRMC
Sbjct: 61  LGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRKARLVCDVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEM++LHYFP+VSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR  DD
Sbjct: 121 SKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTADD 180

Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           D ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 D-ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 230

BLAST of Cp4.1LG11g08320 vs. NCBI nr
Match: KAG6599145.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384 bits (987), Expect = 2.02e-125
Identity = 198/211 (93.84%), Postives = 204/211 (96.68%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MI INHPGLLQDYA+LHNETEA+KEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIEINHPGLLQDYAQLHNETEAMKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
            GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDGTEATTRKARSVCDVNQKSRMC
Sbjct: 61  LGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGTEATTRKARSVCDVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEMS+LHYFPIVSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR E+D
Sbjct: 121 SKKEMSVLHYFPIVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTEED 180

Query: 181 DD--ELKNICSRSEVDAKNSDLMVSSMCRNV 209
           DD  ELKNICSRSEVDAKNSDLMVSSMCRN+
Sbjct: 181 DDNDELKNICSRSEVDAKNSDLMVSSMCRNI 211

BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match: A0A6J1KKM1 (uncharacterized protein LOC111494012 OS=Cucurbita maxima OX=3661 GN=LOC111494012 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 3.36e-149
Identity = 217/231 (93.94%), Postives = 224/231 (96.97%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MI INHP LLQDYAEL NETEA+KEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIRINHPPLLQDYAELQNETEAMKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
            GFKLPQNLKIRPPVSKKENRSRKREARNLN+RGGISDG EATTRKARSVC+VNQKSRMC
Sbjct: 61  VGFKLPQNLKIRPPVSKKENRSRKREARNLNQRGGISDGMEATTRKARSVCNVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEMSILHYFPI+SQKERVYRAHEVA NTNMTPVFDLNQISREEEELQVGFEP+R ED+
Sbjct: 121 SKKEMSILHYFPIISQKERVYRAHEVATNTNMTPVFDLNQISREEEELQVGFEPIRTEDE 180

Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           +DELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 NDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231

BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match: A0A6J1G446 (uncharacterized protein LOC111450577 OS=Cucurbita moschata OX=3662 GN=LOC111450577 PE=4 SV=1)

HSP 1 Score: 420 bits (1080), Expect = 7.64e-148
Identity = 217/231 (93.94%), Postives = 221/231 (95.67%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPK 60
           MIGINH GLLQDYAELHNETEA KEKLLILKQKK TLLAEVRFLRHKYELLKNHPETQPK
Sbjct: 1   MIGINHTGLLQDYAELHNETEATKEKLLILKQKKLTLLAEVRFLRHKYELLKNHPETQPK 60

Query: 61  AGFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMC 120
            GFKLPQNLKIRPPVSKKENRS+KREARNLNRRGGISDGTEATTRKAR VCDVNQKSRMC
Sbjct: 61  LGFKLPQNLKIRPPVSKKENRSQKREARNLNRRGGISDGTEATTRKARLVCDVNQKSRMC 120

Query: 121 SKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDD 180
           SKKEM++LHYFP+VSQKERVYRAHEVA NTNMTPVFDLNQISREEEELQ GFEPLR  DD
Sbjct: 121 SKKEMNVLHYFPVVSQKERVYRAHEVATNTNMTPVFDLNQISREEEELQAGFEPLRTADD 180

Query: 181 DDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           D ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA
Sbjct: 181 D-ELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 230

BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match: A0A5A7URJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00350 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 4.06e-101
Identity = 165/240 (68.75%), Postives = 192/240 (80.00%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPET-QP 60
           M+GI H  LLQDY ELHNETEA+K+KLLI K+KK+TLL EVRFLRH+YELLKN P   QP
Sbjct: 22  MVGIKHQSLLQDYQELHNETEAVKKKLLIAKRKKATLLDEVRFLRHRYELLKNQPANIQP 81

Query: 61  KAGFKLPQNLKIRPPVSKKENRSRKREA--------RNLNRRGGISDGTEATTRKARSVC 120
           K GFKL +NL++RPP+ KKE  SRKREA         +LN+RGGI +G EA++RK++S  
Sbjct: 82  KVGFKLSRNLELRPPIVKKEKSSRKREASLKPLAQAHDLNQRGGIYNGIEASSRKSQSFF 141

Query: 121 DVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVG 180
           D+NQKS  CSKKE+ + + FP   QKERVYRAHE AAN NMTPVFDLNQISREEEE+Q G
Sbjct: 142 DLNQKSNTCSKKEVIMNNSFPTFDQKERVYRAHEAAANRNMTPVFDLNQISREEEEMQAG 201

Query: 181 FEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           FEPLR+ +D  E KNI  RSE DAKNSDL++SSMCRN  NGSNRAGKRKISWQD+VALRA
Sbjct: 202 FEPLRQLED--ESKNIFPRSEHDAKNSDLVLSSMCRNDDNGSNRAGKRKISWQDQVALRA 259

BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match: A0A1S3BVT4 (uncharacterized protein LOC103493683 OS=Cucumis melo OX=3656 GN=LOC103493683 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 4.06e-101
Identity = 165/240 (68.75%), Postives = 192/240 (80.00%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPET-QP 60
           M+GI H  LLQDY ELHNETEA+K+KLLI K+KK+TLL EVRFLRH+YELLKN P   QP
Sbjct: 22  MVGIKHQSLLQDYQELHNETEAVKKKLLIAKRKKATLLDEVRFLRHRYELLKNQPANIQP 81

Query: 61  KAGFKLPQNLKIRPPVSKKENRSRKREA--------RNLNRRGGISDGTEATTRKARSVC 120
           K GFKL +NL++RPP+ KKE  SRKREA         +LN+RGGI +G EA++RK++S  
Sbjct: 82  KVGFKLSRNLELRPPIVKKEKSSRKREASLKPLAQAHDLNQRGGIYNGIEASSRKSQSFF 141

Query: 121 DVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVG 180
           D+NQKS  CSKKE+ + + FP   QKERVYRAHE AAN NMTPVFDLNQISREEEE+Q G
Sbjct: 142 DLNQKSNTCSKKEVIMNNSFPTFDQKERVYRAHEAAANRNMTPVFDLNQISREEEEMQAG 201

Query: 181 FEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           FEPLR+ +D  E KNI  RSE DAKNSDL++SSMCRN  NGSNRAGKRKISWQD+VALRA
Sbjct: 202 FEPLRQLED--ESKNIFPRSEHDAKNSDLVLSSMCRNDDNGSNRAGKRKISWQDQVALRA 259

BLAST of Cp4.1LG11g08320 vs. ExPASy TrEMBL
Match: A0A0A0LH29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035530 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 3.03e-98
Identity = 161/240 (67.08%), Postives = 187/240 (77.92%), Query Frame = 0

Query: 1   MIGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPET-QP 60
           M+GI H  LLQDY ELHNETEA+K+KLLI K+KK TLL EVRFLRH+YELLK  P   QP
Sbjct: 22  MVGIKHQSLLQDYEELHNETEAMKKKLLIAKRKKETLLDEVRFLRHRYELLKKQPANIQP 81

Query: 61  KAGFKLPQNLKIRPPVSKKENRSRKREA--------RNLNRRGGISDGTEATTRKARSVC 120
           K GFK P+NL+++PP  KKE  SRKREA         ++N+RGGI +G EA++RK++S  
Sbjct: 82  KVGFKRPRNLELKPPTVKKEKSSRKREASLKPLAQAHDVNQRGGIYNGVEASSRKSQSFF 141

Query: 121 DVNQKSRMCSKKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVG 180
           D+NQKS  CSKKE+ +   FP   QKERVYRAHE AAN NMTPVFDLNQISREEEELQ G
Sbjct: 142 DLNQKSNTCSKKEVIVNSSFPTFDQKERVYRAHEAAANRNMTPVFDLNQISREEEELQAG 201

Query: 181 FEPLRKEDDDDELKNICSRSEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVALRA 231
           F+P+R ED   E KNI  RSE DAKNS+L++SSMCRN  NGSNRAGKRKISWQD+VALRA
Sbjct: 202 FKPVRLED---EPKNIFPRSEHDAKNSELVLSSMCRNDDNGSNRAGKRKISWQDQVALRA 258

BLAST of Cp4.1LG11g08320 vs. TAIR 10
Match: AT5G57910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-18
Identity = 81/230 (35.22%), Postives = 112/230 (48.70%), Query Frame = 0

Query: 2   IGINHPGLLQDYAELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHPETQPKA 61
           +   H  L+QDY ELH ETEA++++L  ++++K+TL+AEVRFLR +Y  L+     + K 
Sbjct: 21  VRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQPQEIKK 80

Query: 62  GFKLPQNLKIRPPVSKKENRSRKREARNLNRRGGISDGTEATTRKARSVCDVNQKSRMCS 121
             +     KIR  VS                    S+ +EA T+   S+ D+N   +   
Sbjct: 81  VRRSNGGKKIRVEVSP-------------------SNKSEAETKHV-SLPDLNHSEK--- 140

Query: 122 KKEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDDD 181
                  H     S K RV             P+FDLNQIS EEE+     +   +E+  
Sbjct: 141 ------AHDETKTSPKRRV-------------PLFDLNQISGEEEQETEAVDN-NQENTR 200

Query: 182 DELKNICSR---SEVDAKNSDLMVSSMCRNVGNGSNRAGKRKISWQDRVA 229
            E  N C R   S ++ +  D+  SS CRN GNGSN   KRKISWQD VA
Sbjct: 201 VEESNSCKRLMISSIEMQQKDVKPSS-CRNGGNGSN---KRKISWQDPVA 203

BLAST of Cp4.1LG11g08320 vs. TAIR 10
Match: AT4G30630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-13
Identity = 78/230 (33.91%), Postives = 116/230 (50.43%), Query Frame = 0

Query: 15  ELHNETEALKEKLLILKQKKSTLLAEVRFLRHKYELLKNHP--ETQPK-------AGFKL 74
           EL  E E  +++L ++KQK+ TL +EVRFLR +YE LK     ET P+        G ++
Sbjct: 26  ELEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEV 85

Query: 75  PQNLKIRPPVSKKENRSRKREA---RNLNRRGGISDGTEATTRKARSVCDVNQKSRMCSK 134
           P     R P  +++ +S  R +    +L  +  I +  EA      S CD+++K +   +
Sbjct: 86  P-----RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEALANNVAS-CDLDKKRK---R 145

Query: 135 KEMSILHYFPIVSQKERVYRAHEVAANTNMTPVFDLNQISREEEELQVGFEPLRKEDDDD 194
              S +  FP+              + T+  P FDLNQISREEEE +V  E +  E    
Sbjct: 146 SRGSDVLTFPVSLPD---LNGEGNTSGTDKVPGFDLNQISREEEEPEVNGEHMVAE---- 205

Query: 195 ELKNICSRSEVDAKNSDLMVS---SMCRNVGNGSNRAGKRKISWQDRVAL 230
            +KN    + +D + SDL V     +C +V    NRA KRK++WQD VAL
Sbjct: 206 AMKN----AMLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVAL 235

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023546781.14.25e-159100.00uncharacterized protein LOC111805783 [Cucurbita pepo subsp. pepo][more]
KAG7030088.12.72e-15194.85hypothetical protein SDJN02_08435 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022999758.16.95e-14993.94uncharacterized protein LOC111494012 [Cucurbita maxima][more]
XP_022946544.11.58e-14793.94uncharacterized protein LOC111450577 [Cucurbita moschata][more]
KAG6599145.12.02e-12593.84Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb... [more]
Match NameE-valueIdentityDescription
A0A6J1KKM13.36e-14993.94uncharacterized protein LOC111494012 OS=Cucurbita maxima OX=3661 GN=LOC111494012... [more]
A0A6J1G4467.64e-14893.94uncharacterized protein LOC111450577 OS=Cucurbita moschata OX=3662 GN=LOC1114505... [more]
A0A5A7URJ04.06e-10168.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BVT44.06e-10168.75uncharacterized protein LOC103493683 OS=Cucumis melo OX=3656 GN=LOC103493683 PE=... [more]
A0A0A0LH293.03e-9867.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G57910.13.2e-1835.22unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G30630.12.4e-1333.91unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110
NoneNo IPR availablePANTHERPTHR34807OS08G0270800 PROTEINcoord: 5..231
NoneNo IPR availablePANTHERPTHR34807:SF3OS08G0270800 PROTEINcoord: 5..231

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g08320.1Cp4.1LG11g08320.1mRNA