CSPI07G21530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI07G21530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein CURVATURE THYLAKOID 1C, chloroplastic
Location	Chr7: 18374788 .. 18378056 (+)
RNA-Seq Expression	CSPI07G21530
Synteny	CSPI07G21530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTACAATCACTCCAAAATTTAGAAGGAAAAAAAAAAAAACCTAAAAATCAAATCTTGTGGTGGAGACTGAGCAAGAAACCCCCAACGCCTTATCTTTCAAGAGGTTCATCAATCCAAGGCCAGGAATTCCAATTAATTCCAAATTTTCGACTTAATTTTTGATTTGGGTGTCTAAATTTGAGCTCAAATTTCATTGATCTCACCTTCAACTCACTAATCATGGCTTCCATTGTTGCTACTCTACCTCCGCCATTGTTGGCGCCTCGCAAAAGCTTTACTATTCTCAACATTTCTCAGAAGCTCTCTGTTTTCTCCACTGCAAGTAAGTTTGTCACTCCAATCTATCCGATCATATTGTTGAATTTATCCACCGTTGTAATTGATGTCTGTTCGATCGTGTTTATTTGAGCTGCATTTCTTATAACTACTGTGCTTGGTTTGAATTTTGAACTGAAGGGGTTATTTCGATTTGATGCTTGAAAGCTATTATAGCAGGAGTTTAGGCCTTAGTGAGAAATGAGGTTTGTAGTTGTGCTAGAAAATGTTGATTGTTACTCTTTTAAGACATGGGCTAGAGGATGTGGAGATGAAGAGGGTATCTGTTTATTGGTTTGGAACTTTAGAATCGTCAAATTTAGAGATTTTGCACAACTGATTGTTGATATTGAAGATAGAAATATCTGTATTGGTATATAATCCTCACCTACACTTGGAAGCTTCACATTTCTTGCACCATTTCTTCATAGAAGAAACCTATGGAACTTCCTTTTAGACTTGAATTCAATTTTCAGGATGATAGGAATCAGCACTGGTATTTTATTGTCATTAAACAAAAGTGGTAACCTGTGCACCTCAATTGTAGGTGCTAGCTTGTTTCCATACACTAACATTCACAATTTATCACACAACAACTCGCTTGCACAATCCTTTTAGGTCTGTTTACAGCAGACAATTGTAGGGAGTAGGAGTTTCTCGTCACAGCTTCGGGTGGTTGGTAGGGTACTGAGACCCCTTTTTGGTAAAAGAAATATTTCATTGATGAATGAAATTAGGGGAGAACCCCAAACAGCTAAAGGTGATTACAAGAGTGTGTCAATTACTGACTAAAAAGGATAAGCTAAACTGAGAGAAAGGGTGCTTCAACTTTGCAAATTGGATAAAGCACCACAAATTATTCTAGTGGTCCATCGTGGCCCATGTAAATAAGAAAAAAGTTTAGAAGAAGTGAGTTCAAGTTATAGTAGTCATCTATCACTTAACATTCTATAAGTTTCCTTTGCAACAAAATGTAGTTTGGTCAAACAATTGTTTCATTAGAATAGTCAAAGTCTGTACAAGTTGGTCCGGACAATCATAGAGTCGGAGATGTAAAAGGGAAAAGAAATAAGTTATTGTGAAATGTTTGGAAATTTGCATTCAAATTGTTATAGTTTCTTTATATAAAAATTTCAAGGTTATGCTTAAAATCTGCTAAATATAATTCCCTGCTTCCTAGCCATCTATTGTAGGCAATATTTTGGAATGGCACCTCTGTGTAACTGTATGTAACTAATTGGAGTTCTCCATATCTTGTTCATCATACTACTTCTTGTTAGTAAATAGTTTATCAAAGGTTCAAAATTGCAGATGGACGTTCGGGCAATGTGGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTGTAAGCACTTCATTTCTTTTTCCCTCTTTCATGCATTCTATGGATGACAAATTTTACCTTAATCTTATGTGTATTTAGTTTGTTTTGGGTGTCCTAATTTAATCAATAAAAATGCCAACCAAAGCATAATCAACCAAAGAAGTCCGTAGTTTGAATCACATTAGTTCCACTTATAGTTAAAACGCATAAAATAATAATTATAATAACTTTCATGCTAGCAATGACACTGTAAATATGTTTCTAAAATCTACAAAGGGAAGGTTAATTAAAACTTTTTTTCTTTTTTGAAAAAATGTGTACAATGGACTAACATTAAAGACTAAATTTTAATATTTGATTGAAGGTTCTATAGATTAAATATAGACTACAAATAGAACAGAAATGATATTTTAAGCGTATATGTTTCTGGTTAACTTGGAACAGTGGGATCAACCTGAAGACCGACTGGCGCTTTTCGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAACGTTGTTACGGTAATCTAAAAACAATGACCTATTTGGACAAATGAGAGACAAGATAATCACATAGCACGTGGAATTTTCAACCATGTCAGTGATTCCTCATGTTTTGTTCCTTTCATCTTCATCTCATAAACTTGTTTATTCTCATTTGCTGCTTGTAGGCCATCGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGAGCACTGGTTTCTTGGGTAAGTCACAACATAATATCAGTAACTTCTTTAAAGCCATCGCTTTCTCTCCTTACAACTTCCATTACTGACCAATGTTTTTGTTTTCTACAATCGATTCCAGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGTAAAGCAAAATTGAGTAGTTTTTCTTCATTTGGTTTATATATGAAGTGTTTTCGACATTTTTGCTGTCTTTAGCTTGCTGTAAAATGTCGTGAACAAATTTGAACTGACTTGTGTGTCTTTTTCACTGCAGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAAAATTGGCCGATTTGGACCAATCTTCATTATATTCCATTCTTTTTTACAAAGTAATGATGATGAAAGAGGGTTGGTCCCGGGGTTGTATTCAACAGTCAAGTGTGAATTTTTTAATCAAGGTTGGTGTTTTGTTCATCAATGCACTGCAATCCCAAATCTTCAATCTCTCTGGTCTATGTTTATGTTTCAAAATTTCAACACTTCGTTAGGATTTAGAAGACGTTGGATACTCGTAATGTAATGGGTTTGTAATTCAAAATCTATGTTTTGATTGACCTTTCCGGATTTGGTTTGTAATACAAACTAGGAGTATAAAGAAAAACTTCTCTAACCAACCAAAATCGTTTGTCAGTTTGGGTTGAAATCGGTCGACTTGGTGGTTTCGGGTTGAAAATGTGTCGAGTTGAGAAGATTTGGCTGGGTTCGGGTTTTGTGAGAAAAAATATGTGAAAAACCGAACTGGTTGCTAAAACATATATAATAAAATCACTAGATTTG

mRNA sequence

ATTTTACAATCACTCCAAAATTTAGAAGGAAAAAAAAAAAAACCTAAAAATCAAATCTTGTGGTGGAGACTGAGCAAGAAACCCCCAACGCCTTATCTTTCAAGAGGTTCATCAATCCAAGGCCAGGAATTCCAATTAATTCCAAATTTTCGACTTAATTTTTGATTTGGGTGTCTAAATTTGAGCTCAAATTTCATTGATCTCACCTTCAACTCACTAATCATGGCTTCCATTGTTGCTACTCTACCTCCGCCATTGTTGGCGCCTCGCAAAAGCTTTACTATTCTCAACATTTCTCAGAAGCTCTCTGTTTTCTCCACTGCAAATGGACGTTCGGGCAATGTGGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTTGGGATCAACCTGAAGACCGACTGGCGCTTTTCGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAACGTTGTTACGGCCATCGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGAGCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAAAATTGGCCGATTTGGACCAATCTTCATTATATTCCATTCTTTTTTACAAAGTAATGATGATGAAAGAGGGTTGGTCCCGGGGTTGTATTCAACAGTCAAGTGTGAATTTTTTAATCAAGGTTGGTGTTTTGTTCATCAATGCACTGCAATCCCAAATCTTCAATCTCTCTGGTCTATGTTTATGTTTCAAAATTTCAACACTTCGTTAGGATTTAGAAGACGTTGGATACTCGTAATGTAATGGGTTTGTAATTCAAAATCTATGTTTTGATTGACCTTTCCGGATTTGGTTTGTAATACAAACTAGGAGTATAAAGAAAAACTTCTCTAACCAACCAAAATCGTTTGTCAGTTTGGGTTGAAATCGGTCGACTTGGTGGTTTCGGGTTGAAAATGTGTCGAGTTGAGAAGATTTGGCTGGGTTCGGGTTTTGTGAGAAAAAATATGTGAAAAACCGAACTGGTTGCTAAAACATATATAATAAAATCACTAGATTTG

Coding sequence (CDS)

ATGGCTTCCATTGTTGCTACTCTACCTCCGCCATTGTTGGCGCCTCGCAAAAGCTTTACTATTCTCAACATTTCTCAGAAGCTCTCTGTTTTCTCCACTGCAAATGGACGTTCGGGCAATGTGGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTTGGGATCAACCTGAAGACCGACTGGCGCTTTTCGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAACGTTGTTACGGCCATCGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGAGCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAA

Protein sequence

MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ*

Homology

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BLAST of CSPI07G21530 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.9e-34
Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 1   MASIVATLPPP-LLAPRKS---------FTILNISQKLSVFS-TANGRSGNVVVKAVGGS 60
           MASI ATLP P LL  RKS         F++   +  LS  S T N  S +++VKA G S
Sbjct: 1   MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60

Query: 61  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 120
           S+SST LD+V +++NVWD+ EDRL L GLGFA +   W + N++TAIDKLP++    E +
Sbjct: 61  SDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELV 120

Query: 121 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ 146
           G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 GILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 156

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BLAST of CSPI07G21530 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 50  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 109
           +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 110 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

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BLAST of CSPI07G21530 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 10  PPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESST--SLDIVKSVRNVWD 69
           PP    R SFT+      L + S  NG     ++K    S E+S+  + +++  ++  WD
Sbjct: 32  PPRSFGRSSFTV-----PLKLVS-GNGLQKVELLKTRASSEETSSIDTNELITDLKEKWD 91

Query: 70  QPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPN 129
             E++  +   G  A+   W ++ VV AI+ +PLLP V+E +G   + WFVYRYLLFK +
Sbjct: 92  GLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSS 151

Query: 130 REELLQII 136
           R+EL + I
Sbjct: 152 RKELAEDI 153

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BLAST of CSPI07G21530 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 62  VRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYRY 121
           +  ++ Q + +L LFG     + T      V+ A+D +P+L  + E IG +   WFVYRY
Sbjct: 796 INQLYQQYQGQLKLFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRY 855

Query: 122 LLFKPNREELLQIINKSILDVFGQ 146
           LL + NR+ELL  I     ++FG+
Sbjct: 856 LLKRSNRQELLDKIENIKREIFGK 879

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BLAST of CSPI07G21530 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.7e-06
Identity = 29/101 (28.71%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 44  KAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLP 103
           +A     E + +L+ +  ++   D+    + L+G G  A+   +  + +V++++ +PL P
Sbjct: 92  EAPQAEDEETQALEFLNDIKLDSDKTYS-ILLYGSG--AIVALYLTSAIVSSLEAIPLFP 151

Query: 104 GVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
            ++E +G   + WF  RYLLFK NREEL   +++    V G
Sbjct: 152 KLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLG 189

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BLAST of CSPI07G21530 vs. ExPASy TrEMBL
Match: A0A0A0KC66 (CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447010 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. ExPASy TrEMBL
Match: A0A5D3BWY3 (Protein CURVATURE THYLAKOID 1C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002150 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSV STA GR GNVVVKAVGGSSESSTSLDI+K
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDR ALFGLGFAAVATAWTATN+VTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRFALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. ExPASy TrEMBL
Match: A0A1S3CHU0 (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500595 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.7e-69
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSV STA GR GNVVVKAVGGSSESSTSLDI+K
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDR ALFGLGFAAVATAWTATN+V AIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRFALFGLGFAAVATAWTATNLVMAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. ExPASy TrEMBL
Match: A0A6J1KFS9 (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494666 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.8e-58
Identity = 117/145 (80.69%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASI ATLPPPLLAP KSF  L   QK++VF  A GRS N +VKA+G SSESSTS+DI+K
Sbjct: 1   MASIFATLPPPLLAPGKSFNPLFTYQKITVFPIAKGRSANGIVKAIGDSSESSTSIDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRL LFGLGFAAV  AWTATN+VTA+DKLPLLPGVLEFIG LVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLGLFGLGFAAVVGAWTATNLVTAVDKLPLLPGVLEFIGILVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKS+ DV GQ
Sbjct: 121 YLLFKPNREELLQIINKSVADVLGQ 145

[Close]

BLAST of CSPI07G21530 vs. ExPASy TrEMBL
Match: A0A6J1HLG0 (protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464586 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57
Identity = 117/146 (80.14%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFT-ILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIV 60
           MASI ATLPPPLLAP KSFT +    +KL+VF  A GRS N +VKA+G SSESSTS+DI+
Sbjct: 1   MASIFATLPPPLLAPGKSFTPLFTYQKKLTVFPIAKGRSANGIVKAIGDSSESSTSIDII 60

Query: 61  KSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVY 120
           KSVRNVWDQPEDRL LFGLGFAAV  AWTATN+VTA+DKLPLLPGVLEFIG LVSWWFVY
Sbjct: 61  KSVRNVWDQPEDRLGLFGLGFAAVVGAWTATNLVTAVDKLPLLPGVLEFIGILVSWWFVY 120

Query: 121 RYLLFKPNREELLQIINKSILDVFGQ 146
           RYLLFKPNREELLQIINKS+ DV GQ
Sbjct: 121 RYLLFKPNREELLQIINKSVADVLGQ 146

[Close]

BLAST of CSPI07G21530 vs. NCBI nr
Match: XP_004141763.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus] >KGN45386.1 hypothetical protein Csa_015763 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 3.0e-72
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. NCBI nr
Match: KAA0059311.1 (protein CURVATURE THYLAKOID 1C [Cucumis melo var. makuwa] >TYK04017.1 protein CURVATURE THYLAKOID 1C [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSV STA GR GNVVVKAVGGSSESSTSLDI+K
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDR ALFGLGFAAVATAWTATN+VTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRFALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. NCBI nr
Match: XP_008462170.1 (PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFTILNISQKLSV STA GR GNVVVKAVGGSSESSTSLDI+K
Sbjct: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVLSTAKGRCGNVVVKAVGGSSESSTSLDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDR ALFGLGFAAVATAWTATN+V AIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRFALFGLGFAAVATAWTATNLVMAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSILDVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSILDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. NCBI nr
Match: XP_038897597.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67
Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASIVATLPPPLLAPRKSFT+LN SQKL+ F  AN RSGNVVVKAVGGSSESSTSLDI+K
Sbjct: 1   MASIVATLPPPLLAPRKSFTLLNTSQKLTAFPIANRRSGNVVVKAVGGSSESSTSLDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRLALFGLGFAAVAT WTATN+VTAIDKLPLLPGVLEFIGALVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLALFGLGFAAVATVWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKSI+DVFGQ
Sbjct: 121 YLLFKPNREELLQIINKSIIDVFGQ 145

[Close]

BLAST of CSPI07G21530 vs. NCBI nr
Match: XP_023000405.1 (protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima] >XP_023000406.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima])

HSP 1 Score: 233.0 bits (593), Expect = 1.6e-57
Identity = 117/145 (80.69%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 1   MASIVATLPPPLLAPRKSFTILNISQKLSVFSTANGRSGNVVVKAVGGSSESSTSLDIVK 60
           MASI ATLPPPLLAP KSF  L   QK++VF  A GRS N +VKA+G SSESSTS+DI+K
Sbjct: 1   MASIFATLPPPLLAPGKSFNPLFTYQKITVFPIAKGRSANGIVKAIGDSSESSTSIDIIK 60

Query: 61  SVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFIGALVSWWFVYR 120
           SVRNVWDQPEDRL LFGLGFAAV  AWTATN+VTA+DKLPLLPGVLEFIG LVSWWFVYR
Sbjct: 61  SVRNVWDQPEDRLGLFGLGFAAVVGAWTATNLVTAVDKLPLLPGVLEFIGILVSWWFVYR 120

Query: 121 YLLFKPNREELLQIINKSILDVFGQ 146
           YLLFKPNREELLQIINKS+ DV GQ
Sbjct: 121 YLLFKPNREELLQIINKSVADVLGQ 145

[Close]

BLAST of CSPI07G21530 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-35
Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 1   MASIVATLPPP-LLAPRKS---------FTILNISQKLSVFS-TANGRSGNVVVKAVGGS 60
           MASI ATLP P LL  RKS         F++   +  LS  S T N  S +++VKA G S
Sbjct: 1   MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60

Query: 61  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 120
           S+SST LD+V +++NVWD+ EDRL L GLGFA +   W + N++TAIDKLP++    E +
Sbjct: 61  SDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELV 120

Query: 121 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ 146
           G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 GILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 156

[Close]

BLAST of CSPI07G21530 vs. TAIR 10
Match: AT1G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 138.3 bits (347), Expect = 5.0e-33
Identity = 78/156 (50.00%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 1   MASIVATLPPP-LLAPRKS---------FTILNISQKLSVFS-TANGRSGNVVVKAVGGS 60
           MASI ATLP P LL  RKS         F++   +  LS  S T N  S +++VKA G S
Sbjct: 1   MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60

Query: 61  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 120
           S+SST LD+V +++N WD+ EDRL L GLGFA +   W + N++TAIDKLP++    E +
Sbjct: 61  SDSSTDLDVVSTIQN-WDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELV 120

Query: 121 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ 146
           G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 GILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 155

[Close]

BLAST of CSPI07G21530 vs. TAIR 10
Match: AT1G52220.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 251 Blast hits to 251 proteins in 43 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 3.2e-19
Identity = 64/156 (41.03%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 1   MASIVATLPPP-LLAPRKS---------FTILNISQKLSVFS-TANGRSGNVVVKAVGGS 60
           MASI ATLP P LL  RKS         F++   +  LS  S T N  S +++VKA G S
Sbjct: 1   MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60

Query: 61  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 120
           S+SST LD+V +++NV                             AIDKLP++    E +
Sbjct: 61  SDSSTDLDVVSTIQNV-----------------------------AIDKLPVISSGFELV 120

Query: 121 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ 146
           G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Sbjct: 121 GILFSTWFTYRYLLFKPDRQELSKIVKKSVADILGQ 127

[Close]

BLAST of CSPI07G21530 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 50  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 109
           +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 110 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

[Close]

BLAST of CSPI07G21530 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17
Identity = 36/95 (37.89%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 50  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNVVTAIDKLPLLPGVLEFI 109
           +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +
Sbjct: 78  AETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELV 137

Query: 110 GALVSWWFVYRYLLFKPNREELLQIINKSILDVFG 145
           G   + WF Y+ L+FKP+RE L + +  +  D+ G
Sbjct: 138 GIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILG 172

The following BLAST results are available for this feature:

BLAST of CSPI07G21530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M812	9.9e-34	50.64	Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8LCA1	1.9e-16	37.89	Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O04616	1.1e-11	35.16	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q119Z5	1.9e-08	35.71	Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=...	[more]
Q8LDD3	6.7e-06	28.71	Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CSPI07G21530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC66	1.5e-72	100.00	CAAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447010 PE=4 S...	[more]
A0A5D3BWY3	1.2e-69	95.86	Protein CURVATURE THYLAKOID 1C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CHU0	5.7e-69	95.17	protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1KFS9	7.8e-58	80.69	protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HLG0	1.7e-57	80.14	protein CURVATURE THYLAKOID 1C, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CSPI07G21530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141763.1	3.0e-72	100.00	protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus] >KGN45386.1 hypo...	[more]
KAA0059311.1	2.4e-69	95.86	protein CURVATURE THYLAKOID 1C [Cucumis melo var. makuwa] >TYK04017.1 protein CU...	[more]
XP_008462170.1	1.2e-68	95.17	PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo]	[more]
XP_038897597.1	2.9e-67	92.41	protein CURVATURE THYLAKOID 1C, chloroplastic [Benincasa hispida]	[more]
XP_023000405.1	1.6e-57	80.69	protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima] >XP_023000406.1...	[more]

BLAST of CSPI07G21530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52220.1	7.0e-35	50.64	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G52220.2	5.0e-33	50.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G52220.3	3.2e-19	41.03	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G46820.1	1.3e-17	37.89	photosystem I P subunit	[more]
AT2G46820.2	1.3e-17	37.89	photosystem I P subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 61..144 e-value: 4.1E-26 score: 90.6
IPR033344	Protein CURVATURE THYLAKOID 1	PANTHER	PTHR33222	FAMILY NOT NAMED	coord: 1..145
None	No IPR available	PANTHER	PTHR33222:SF3	PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC	coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G21530.1	CSPI07G21530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid