Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATTGCATCAACACACTCCATTTCCCACCTCTTCAAAAGATCAAAGGTTTCATTTGCTGTGAAGTAGAAGATTTAAACTTGGCATTGCCAATTGAAAACATAGCTGCTTGTAAAAACCAAGCTTTTACAACTTCAAGTGTAGTGGCTGAGGCTGAAGTTGAGCATGGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATTTGTGCAAACTTCCTAAGACCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGGAAATCCAAAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATAGTTTCAAGGTCGACGATGGATGCCCCAGATGGCACCCCGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAGTTTTGCCTCTTGTATTCGAGAAAATTTGGTCCATGAAGTTTTAAATCTGTGTCTAGAGAATAGGGGCTTTTTAGAAACTTTTTAAAAACTAGACAAGGACTTAGACTTATAATTCGTGTGGGAAATTTTGTATAGTTCTTTTTTACTGATCGGCTGCTAGAGACGTTTGCTCAGTTGGTATCATCCCGAATTGATTTTT
mRNA sequence
ATGGGAAATTGCATCAACACACTCCATTTCCCACCTCTTCAAAAGATCAAAGGTTTCATTTGCTGTGAAGTAGAAGATTTAAACTTGGCATTGCCAATTGAAAACATAGCTGCTTGTAAAAACCAAGCTTTTACAACTTCAAGTGTAGTGGCTGAGGCTGAAGTTGAGCATGGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATTTGTGCAAACTTCCTAAGACCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGGAAATCCAAAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATAGTTTCAAGGTCGACGATGGATGCCCCAGATGGCACCCCGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAGTTTTGCCTCTTGTATTCGAGAAAATTTGGTCCATGAAGTTTTAAATCTGTGTCTAGAGAATAGGGGCTTTTTAGAAACTTTTTAAAAACTAGACAAGGACTTAGACTTATAATTCGTGTGGGAAATTTTGTATAGTTCTTTTTTACTGATCGGCTGCTAGAGACGTTTGCTCAGTTGGTATCATCCCGAATTGATTTTT
Coding sequence (CDS)
ATGGGAAATTGCATCAACACACTCCATTTCCCACCTCTTCAAAAGATCAAAGGTTTCATTTGCTGTGAAGTAGAAGATTTAAACTTGGCATTGCCAATTGAAAACATAGCTGCTTGTAAAAACCAAGCTTTTACAACTTCAAGTGTAGTGGCTGAGGCTGAAGTTGAGCATGGCCCTCCTCCACTTCCTGTTCGTATTGATCATTCAATTGTCAAGCCTGCAGATTTGTGCAAACTTCCTAAGACCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGGAAATCCAAAAACTTTGGCTCTAAAGGTATTGCTGTTCAGTTCTCTGATAGTTTCAAGGTCGACGATGGATGCCCCAGATGGCACCCCGCCTTGCCCACCATTCCTGAGGTTCGCAATTACTAG
Protein sequence
MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSVVAEAEVEHGPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY*
Homology
BLAST of CSPI06G32840 vs. ExPASy TrEMBL
Match:
A0A0A0KHP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1)
HSP 1 Score: 285.0 bits (728), Expect = 1.6e-73
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSVVAEAEVEHGPP 60
MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSS VAEAEVEHGPP
Sbjct: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSAVAEAEVEHGPP 60
Query: 61 PLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGC 120
PLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGC
Sbjct: 61 PLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGC 120
Query: 121 PRWHPALPTIPEVRNY 137
PRWHPALPTIPEVRNY
Sbjct: 121 PRWHPALPTIPEVRNY 136
BLAST of CSPI06G32840 vs. ExPASy TrEMBL
Match:
A0A5D3CLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00250 PE=4 SV=1)
HSP 1 Score: 243.8 bits (621), Expect = 4.1e-61
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA---CKNQAFTTSSVVAEAEVEH 60
MGNCINT HFPPLQKIKGFICCEVE L+L LPI N+AA CK+QAFTTSS V AEV+H
Sbjct: 1 MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAV--AEVQH 60
Query: 61 GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120
PPPLPVRIDHSIVKPAD KLPK TIVVSKQQLELILRKSKNFGSKGIAVQFSD FKVD
Sbjct: 61 SPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVD 120
Query: 121 DGCPRWHPALPTIPEVRNY 137
DGCPRWHPALPTIPEVRNY
Sbjct: 121 DGCPRWHPALPTIPEVRNY 137
BLAST of CSPI06G32840 vs. ExPASy TrEMBL
Match:
B9HD50 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 9.7e-10
Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVE-DLNLALPIENIAACKNQAFTTSSVVAEAEVEHGP 60
MGNCI+ L + ++ K I E + + ++ I + + + ++ + + + P
Sbjct: 1 MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVKKITSGRYGGY----MLVHSALPYVP 60
Query: 61 PPLPVRIDHSIV--------KPADL-----------CKLPKTTIVVSKQQLELILRKSKN 120
P R++ +V +P L C K IVV++QQLEL+LR SK
Sbjct: 61 LPPDTRLEPGVVYYLMPSLGQPCRLEVSSKLAGQETCASRKVKIVVTRQQLELLLRNSKQ 120
Query: 121 FGSKGIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY 137
F SKGIAV+FS+SFK +G +W P+L TIPEV+ +
Sbjct: 121 FRSKGIAVRFSESFK--EGERKWRPSLVTIPEVQKF 150
BLAST of CSPI06G32840 vs. ExPASy TrEMBL
Match:
A0A5N5M953 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVE-DLNLALPIENIAACK-------NQA-----FTTS 60
MGNCI+ + ++ K I E + + P++ I + + N+A
Sbjct: 1 MGNCIDFMPCSSGERSKVLIHNGGEKEFKSSTPVKKITSGRYGGYILVNRALPYAPLPPD 60
Query: 61 SVVAEAEVEHGPPPL--PVRID-HSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSK 120
+V+ EV H PPL P R++ S + + C K IVV++QQLEL+LR SK +
Sbjct: 61 TVLEPGEVYHLMPPLDQPSRLEVSSKLTGQEACAGRKVKIVVTRQQLELLLRNSKQLKLR 120
Query: 121 GIAVQFSDSFKVDDGCPRWHPALPTIPEV 134
GIAVQFS+SFK +G +W P+L TIPEV
Sbjct: 121 GIAVQFSESFK--EGKRKWQPSLVTIPEV 147
BLAST of CSPI06G32840 vs. ExPASy TrEMBL
Match:
A0A314YSB9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_06292 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCE-VEDLNLALPIENIAACKN---------QAFT---TS 60
MGNC++ L PP +KIK I V + + PIE I + Q FT +
Sbjct: 13 MGNCLHVLCHPPQEKIKVVIFKRGVREFKASTPIEEITSGPYIGYKLVHHVQPFTPLPPN 72
Query: 61 SVVAEAEVEH--------GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSK 120
+ + EV H G P +P +I H + CK K IVV+++QLEL+L+ +
Sbjct: 73 TKLEPGEVYHLVPNLASLGKPLVPSKIVHQ-----ESCKRQKIKIVVTREQLELLLKTAN 132
Query: 121 NFGS-KGIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY 137
F S K I VQ S + +G P+W P+L IPEV ++
Sbjct: 133 KFRSPKEIGVQLSGRSGL-EGPPKWRPSLAIIPEVHSF 164
BLAST of CSPI06G32840 vs. NCBI nr
Match:
KAE8647639.1 (hypothetical protein Csa_004428 [Cucumis sativus])
HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSVVAEAEVEHGPP 60
MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSS VAEAEVEHGPP
Sbjct: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSAVAEAEVEHGPP 60
Query: 61 PLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGC 120
PLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGC
Sbjct: 61 PLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDDGC 120
Query: 121 PRWHPALPTIPE 133
PRWHPALPTIPE
Sbjct: 121 PRWHPALPTIPE 132
BLAST of CSPI06G32840 vs. NCBI nr
Match:
KAA0025575.1 (hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK12450.1 hypothetical protein E5676_scaffold255G00250 [Cucumis melo var. makuwa])
HSP 1 Score: 243.8 bits (621), Expect = 8.6e-61
Identity = 120/139 (86.33%), Postives = 124/139 (89.21%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA---CKNQAFTTSSVVAEAEVEH 60
MGNCINT HFPPLQKIKGFICCEVE L+L LPI N+AA CK+QAFTTSS V AEV+H
Sbjct: 1 MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVAAYGDCKSQAFTTSSAV--AEVQH 60
Query: 61 GPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120
PPPLPVRIDHSIVKPAD KLPK TIVVSKQQLELILRKSKNFGSKGIAVQFSD FKVD
Sbjct: 61 SPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFKVD 120
Query: 121 DGCPRWHPALPTIPEVRNY 137
DGCPRWHPALPTIPEVRNY
Sbjct: 121 DGCPRWHPALPTIPEVRNY 137
BLAST of CSPI06G32840 vs. NCBI nr
Match:
KAG6603830.1 (hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 184.1 bits (466), Expect = 8.0e-43
Identity = 99/139 (71.22%), Postives = 108/139 (77.70%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSVVAEAEVEHGPP 60
MGNCINT HF PLQK+K ICCE EDL+LALPIE IA + A+TTSS V EV+ G P
Sbjct: 1 MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIA---SGAYTTSSAV--LEVDRGAP 60
Query: 61 PLPVRI--DHSIVKPADLCKLPK-TTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVD 120
PLPV I D ++ KP LCKLPK TTIVVSKQQLELILR S+ F SKGIAVQFSDSF+VD
Sbjct: 61 PLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFASKGIAVQFSDSFEVD 120
Query: 121 DGCPRWHPALPTIPEVRNY 137
D CPRW PALPTI EV NY
Sbjct: 121 DRCPRWCPALPTILEVHNY 134
BLAST of CSPI06G32840 vs. NCBI nr
Match:
KAG6594706.1 (hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 116.7 bits (291), Expect = 1.6e-22
Identity = 69/138 (50.00%), Postives = 79/138 (57.25%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAACKNQAFTTSSVVAEAEVEHGPP 60
MGNCI++ H +LA+P+E IA K +S V E P
Sbjct: 1 MGNCISSPHL----------------YDLAVPVEKIAGLK-----LTSAVLEVGRGAATP 60
Query: 61 PLPVRI--DHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDSFKVDD 120
P V I D I KPA LCKLPK TIVVSK+QLE +L S+ FGS+GIAVQFSDSFK D
Sbjct: 61 PAHVLIDDDDDITKPAALCKLPKATIVVSKEQLEFLLTNSQQFGSQGIAVQFSDSFKFDR 117
Query: 121 GCPRWHPALPTIPEVRNY 137
C RW P LPTI EV NY
Sbjct: 121 SCSRWCPVLPTILEVHNY 117
BLAST of CSPI06G32840 vs. NCBI nr
Match:
KAF9851460.1 (hypothetical protein H0E87_015599 [Populus deltoides])
HSP 1 Score: 76.3 bits (186), Expect = 2.4e-10
Identity = 54/152 (35.53%), Postives = 80/152 (52.63%), Query Frame = 0
Query: 1 MGNCINTLHFPPLQKIKGFICCEVE-DLNLALPIENIAACKNQAF------------TTS 60
MGNCI+ L + ++ K I E + + ++ I + + +
Sbjct: 1 MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVQKITSGRYGGYMLVHSALPYVPLPPD 60
Query: 61 SVVAEAEVEHGPPPL--PVRID-HSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSK 120
+ + EV H P L P R++ S + + C K IVV++QQLEL+LR SK F SK
Sbjct: 61 TRLEPGEVYHLMPSLGQPCRLEVSSKLAGQETCASRKVKIVVTRQQLELLLRNSKQFRSK 120
Query: 121 GIAVQFSDSFKVDDGCPRWHPALPTIPEVRNY 137
GIAV+FS+SFK +G +W P+L TIPEVR +
Sbjct: 121 GIAVRFSESFK--EGERKWRPSLVTIPEVRKF 150
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KHP3 | 1.6e-73 | 99.26 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1 | [more] |
A0A5D3CLY8 | 4.1e-61 | 86.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
B9HD50 | 9.7e-10 | 32.69 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 ... | [more] |
A0A5N5M953 | 2.8e-09 | 36.91 | Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1 | [more] |
A0A314YSB9 | 1.1e-08 | 34.18 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_062... | [more] |
Match Name | E-value | Identity | Description | |
KAE8647639.1 | 2.7e-70 | 99.24 | hypothetical protein Csa_004428 [Cucumis sativus] | [more] |
KAA0025575.1 | 8.6e-61 | 86.33 | hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK1245... | [more] |
KAG6603830.1 | 8.0e-43 | 71.22 | hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6594706.1 | 1.6e-22 | 50.00 | hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAF9851460.1 | 2.4e-10 | 35.53 | hypothetical protein H0E87_015599 [Populus deltoides] | [more] |
Match Name | E-value | Identity | Description | |