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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGATCGGAGCACTAAAACGACCAATATATTTAGTTGAGTCGGTCGCCGGGTGAAGAAAAAGAGCTGAGTTGATAAAAGAAAGACGCCTCCGAGCTCGGCGGTGAGGAGCGGTGGAGGGGGGGTGATATAGATTGGGTTATGTCCACGTAGGACGGCGGTGGTGGTGGTCGGCTGCGGATCCAATCATGCGGCGGACCGCATCATTAAACCCTTCTCCCTCCAGACCCCACACCCAATATGGGTTTCCACCAAAAACTCTTACCTCTAA mRNA sequence ATGGTGATCGGAGCACTAAAACGACCAATATATTTAGTTGAGTCGGTCGCCGGGACGGCGGTGGTGGTGGTCGGCTGCGGATCCAATCATGCGGCGGACCGCATCATTAAACCCTTCTCCCTCCAGACCCCACACCCAATATGGGTTTCCACCAAAAACTCTTACCTCTAA Coding sequence (CDS) ATGGTGATCGGAGCACTAAAACGACCAATATATTTAGTTGAGTCGGTCGCCGGGACGGCGGTGGTGGTGGTCGGCTGCGGATCCAATCATGCGGCGGACCGCATCATTAAACCCTTCTCCCTCCAGACCCCACACCCAATATGGGTTTCCACCAAAAACTCTTACCTCTAA Protein sequence MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL*
Homology
BLAST of CSPI06G31600 vs. ExPASy TrEMBL
Match: A0A0A0KMC8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505250 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.2e-23 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 1 MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL 57
MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL
Sbjct: 1 MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL 56
BLAST of CSPI06G31600 vs. NCBI nr
Match: KGN48896.1 (hypothetical protein Csa_003033 [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 6.6e-23 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 1 MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL 57
MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL
Sbjct: 1 MVIGALKRPIYLVESVAGTAVVVVGCGSNHAADRIIKPFSLQTPHPIWVSTKNSYL 56
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KMC8 | 3.2e-23 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505250 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN48896.1 | 6.6e-23 | 100.00 | hypothetical protein Csa_003033 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..26
score: 5.0 |
Relationships
The following mRNA feature(s) are a part of this gene:
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