CSPI05G29760 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI05G29760
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	stress-induced protein KIN2-like
Location	Chr5: 27903020 .. 27903433 (-)
RNA-Seq Expression	CSPI05G29760
Synteny	CSPI05G29760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACTTCATCATTCAAAACTTTCATCACTATTTGATTTGTAATAGTCTCTCTTGGGAAGTAAATATATATAAAAGATATGGCAGATAGTTCCCAAAAGATGAGCTACCAAGCTGGAGAAGCCAAAGGTCAGGTGGAAGAGAAGGCGAGCAATCTCATGGACAACGCAAACAATGCAGCTCAATCAGCTAAAGAGACGATACAGGAGGCAGGCCAACAGGTGATGGCAAAGGCTCAAGGAGCAGCCGAAGCTATCAAGGATGCAACTGGCATGAACAAATAAAAGTTTAAGTGCTTGTTTAAGTGCTTGTTTGTTTGGATTGACTTTCTAATTTCTAAGTATTTAGAACCGTCAATTCAAACACACCTTAATACTTTATTCCGTTTTATGATTCCTTTTGTTAGTGAGTTGC

mRNA sequence

AAAAAACTTCATCATTCAAAACTTTCATCACTATTTGATTTGTAATAGTCTCTCTTGGGAAGTAAATATATATAAAAGATATGGCAGATAGTTCCCAAAAGATGAGCTACCAAGCTGGAGAAGCCAAAGGTCAGGTGGAAGAGAAGGCGAGCAATCTCATGGACAACGCAAACAATGCAGCTCAATCAGCTAAAGAGACGATACAGGAGGCAGGCCAACAGGTGATGGCAAAGGCTCAAGGAGCAGCCGAAGCTATCAAGGATGCAACTGGCATGAACAAATAAAAGTTTAAGTGCTTGTTTAAGTGCTTGTTTGTTTGGATTGACTTTCTAATTTCTAAGTATTTAGAACCGTCAATTCAAACACACCTTAATACTTTATTCCGTTTTATGATTCCTTTTGTTAGTGAGTTGC

Coding sequence (CDS)

ATGGCAGATAGTTCCCAAAAGATGAGCTACCAAGCTGGAGAAGCCAAAGGTCAGGTGGAAGAGAAGGCGAGCAATCTCATGGACAACGCAAACAATGCAGCTCAATCAGCTAAAGAGACGATACAGGAGGCAGGCCAACAGGTGATGGCAAAGGCTCAAGGAGCAGCCGAAGCTATCAAGGATGCAACTGGCATGAACAAATAA

Protein sequence

MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDATGMNK*

Homology

[Close]

BLAST of CSPI05G29760 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.5e-05
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 5  SQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDATG 64
          + K ++QAG+A G+ EEK++ L+D A +AA +A  + Q+AG+ +   A G    +KD TG
Sbjct: 4  TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

[Close]

BLAST of CSPI05G29760 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 5.0e-04
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 4  SSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDAT 63
          +S   SY+AGEAKG+ EEK + ++ N  + AQ+AKE  Q+A Q    K    A+A K+ T
Sbjct: 2  TSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKT 61

[Close]

BLAST of CSPI05G29760 vs. ExPASy TrEMBL
Match: A0A0A0KVV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643260 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK
Sbjct: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of CSPI05G29760 vs. ExPASy TrEMBL
Match: A0A5A7T8W6 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002080 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.5e-22
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSYQAGEAKGQ EEKASNLMD A+NAAQSAKETIQEAGQQ+MAKAQGAA+AIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of CSPI05G29760 vs. ExPASy TrEMBL
Match: A0A1S3CAA8 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.5e-22
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSYQAGEAKGQ EEKASNLMD A+NAAQSAKETIQEAGQQ+MAKAQGAA+AIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of CSPI05G29760 vs. ExPASy TrEMBL
Match: A0A6J1BYR6 (stress-induced protein KIN2-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSY AGEAKGQ EEKASNLMD A+NAAQSAKET+QEAGQQ+MAKAQGA EAIK
Sbjct: 1  MADSSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIK 60

Query: 61 DATGMNK 68
          DATG+NK
Sbjct: 61 DATGLNK 67

[Close]

BLAST of CSPI05G29760 vs. ExPASy TrEMBL
Match: A0A6J1BXT6 (stress-induced protein KIN2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006689 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.4e-19
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 4   SSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDAT 63
           SSQKMSY AGEAKGQ EEKASNLMD A+NAAQSAKET+QEAGQQ+MAKAQGA EAIKDAT
Sbjct: 57  SSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIKDAT 116

Query: 64  GMNK 68
           G+NK
Sbjct: 117 GLNK 120

[Close]

BLAST of CSPI05G29760 vs. NCBI nr
Match: KAE8648954.1 (hypothetical protein Csa_009338 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-24
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK
Sbjct: 20 MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 79

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 80 DATGMNK 86

[Close]

BLAST of CSPI05G29760 vs. NCBI nr
Match: XP_004141486.1 (late embryogenesis abundant protein 2 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-24
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK
Sbjct: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of CSPI05G29760 vs. NCBI nr
Match: XP_008459448.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039403.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00591.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-21
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSYQAGEAKGQ EEKASNLMD A+NAAQSAKETIQEAGQQ+MAKAQGAA+AIK
Sbjct: 1  MADSSQKMSYQAGEAKGQAEEKASNLMDKASNAAQSAKETIQEAGQQMMAKAQGAADAIK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of CSPI05G29760 vs. NCBI nr
Match: XP_022134444.1 (stress-induced protein KIN2-like isoform X3 [Momordica charantia] >XP_022134445.1 stress-induced protein KIN2-like isoform X3 [Momordica charantia])

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-20
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSY AGEAKGQ EEKASNLMD A+NAAQSAKET+QEAGQQ+MAKAQGA EAIK
Sbjct: 1  MADSSQKMSYHAGEAKGQAEEKASNLMDKASNAAQSAKETMQEAGQQMMAKAQGAVEAIK 60

Query: 61 DATGMNK 68
          DATG+NK
Sbjct: 61 DATGLNK 67

[Close]

BLAST of CSPI05G29760 vs. NCBI nr
Match: XP_038891164.1 (uncharacterized protein LOC120080541 [Benincasa hispida])

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          MADSSQKMSY  GEAKGQ EEKA+NLM+ A+NAAQS KETIQEAGQQ+MAKAQGAAEAIK
Sbjct: 1  MADSSQKMSYHVGEAKGQAEEKATNLMEKASNAAQSTKETIQEAGQQMMAKAQGAAEAIK 60

Query: 61 DATGMNK 68
          DATG+NK
Sbjct: 61 DATGLNK 67

[Close]

BLAST of CSPI05G29760 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-17
Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          M+ +SQ +S+QAG+AKGQ +EKAS +MD A+NAAQSAKE+++E GQQ+  KAQGA E++K
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of CSPI05G29760 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 6.8e-17
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MADSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIK 60
          M+++SQ MS+ AG+AKGQ +EKASNL+D A+NAAQSAKE+IQE GQQ+  KAQGA+E IK
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of CSPI05G29760 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-13
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 3  DSSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDA 62
          D+ Q  SYQAG+A GQ +EKA  +MD A +AA SA++++Q+ GQQ+  KAQGAA+ +KD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of CSPI05G29760 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 48.1 bits (113), Expect = 3.2e-06
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 5  SQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDATG 64
          + K ++QAG+A G+ EEK++ L+D A +AA +A  + Q+AG+ +   A G    +KD TG
Sbjct: 4  TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63

Query: 65 MNK 68
          +NK
Sbjct: 64 LNK 66

[Close]

BLAST of CSPI05G29760 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 40.4 bits (93), Expect = 6.6e-04
Identity = 23/60 (38.33%), Postives = 33/60 (55.00%), Query Frame = 0


Query: 4  SSQKMSYQAGEAKGQVEEKASNLMDNANNAAQSAKETIQEAGQQVMAKAQGAAEAIKDAT 63
          S Q+ SY+AGE +G+ +EK    M    +  Q+AK+  QE  Q    KA   A++ KD T
Sbjct: 3  SHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKT 62

The following BLAST results are available for this feature:

BLAST of CSPI05G29760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	4.5e-05	41.27	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]
O49817	5.0e-04	43.33	Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]

BLAST of CSPI05G29760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVV6	2.0e-24	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643260 PE=4 SV=1	[more]
A0A5A7T8W6	5.5e-22	92.54	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CAA8	5.5e-22	92.54	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498579 PE=4 SV...	[more]
A0A6J1BYR6	1.3e-20	88.06	stress-induced protein KIN2-like isoform X3 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1BXT6	7.4e-19	87.50	stress-induced protein KIN2-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of CSPI05G29760 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648954.1	4.1e-24	100.00	hypothetical protein Csa_009338 [Cucumis sativus]	[more]
XP_004141486.1	4.1e-24	100.00	late embryogenesis abundant protein 2 [Cucumis sativus]	[more]
XP_008459448.1	1.1e-21	92.54	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039403.1 stress-...	[more]
XP_022134444.1	2.8e-20	88.06	stress-induced protein KIN2-like isoform X3 [Momordica charantia] >XP_022134445....	[more]
XP_038891164.1	2.4e-19	85.07	uncharacterized protein LOC120080541 [Benincasa hispida]	[more]

BLAST of CSPI05G29760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	2.4e-17	64.18	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	6.8e-17	65.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.6e-13	56.92	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	3.2e-06	41.27	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT1G52690.1	6.6e-04	38.33	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..47
None	No IPR available	GENE3D	6.10.140.1430		coord: 2..66 e-value: 1.0E-5 score: 27.6
None	No IPR available	PANTHER	PTHR34191:SF13	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 5..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 5..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G29760.1	CSPI05G29760.1	mRNA