CSPI05G00580 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI05G00580
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr5: 797967 .. 798910 (+)
RNA-Seq ExpressionCSPI05G00580
SyntenyCSPI05G00580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCTTCCCCACTATTTCCCTCCCTTTCTCCAACACACAGCCACTGCCCTCCGCACGATTTCCCTTCTTTCTCCCACTGCCGCGCACACAGCCCTGCGATTTCCCCCTTTCTCCCACAGCTGCCGCACACTGCCGCCCCTAAGATTTCCCCACCTTTTTCCGGACTCCATTTCTCGCCGCAGTAGCTTCCCTGCTCGTGCCCGACTTCGTCTTCTCGCTACAATCGTATGTTATCCCTTCGCACGCTCACTGAAGTTTGGAAAATCTTTTATTTTCAACAAGTTTGGTAAATCTTCAACTCTCGTTCTATTGAATTTGAAACCAAAATTTAACATATTCTTGTTGTCTAATTCCTTATAAAATAATTTGAAACCAAAGTTTAAATGATGTAGAATATTTATTATCACATTCTCTATATACAAGGACTTGAAATTTCATTAGTTTAATTATCACGTTTATTTATTTATTTTATTAACTTTACTACCATGTTAAACAAAGTATTGTATATGTGAATTGCTATGACTATCTTGCAGTTTCATAGATTTGTATGGAATATGAGTATGGTGATTTTTGTTGAATTTGAATTTCAAGCATGATCTTGGTGCTATAATCAAATTATTAAACATTTGATCAATCTAAGAAGTGATCAAATTATAACATTCTCTTGGTTGATCTAAACTAGTATAGGGGGGTGTTAGTTTCGATCTTTAGATTGAGGATTAGGATTGCCTTATTAGTGTGTAGCTAGTCCAAGAGCATTATGAATTTGTAATGAAAGGTTTATGAATTTGTAATATATGGACTATTTAGTCAAGTATATTAGTTTCCTTTGCATTTTCAGCACATTTTTGCTTGTAATAATTGGACTTCTAAGTTTATGTATGAACATCTGAGTTACTTGGTTGCTAATTTTGCAGGTTTTACTGCTAAACCTTCGCTGA

mRNA sequence

ATGTTCCTTCCCCACTATTTCCCTCCCTTTCTCCAACACACAGCCACTGCCCTCCGCACGATTTCCCTTCTTTCTCCCACTGCCGCGCACACAGCCCTGCGATTTCCCCCTTTCTCCCACAGCTGCCGCACACTGCCGCCCCTAAGATTTCCCCACCTTTTTCCGGACTCCATTTCTCGCCGCAGTAGCTTCCCTGCTCGTGCCCGACTTCGTCTTCTCGCTACAATCGTTTTACTGCTAAACCTTCGCTGA

Coding sequence (CDS)

ATGTTCCTTCCCCACTATTTCCCTCCCTTTCTCCAACACACAGCCACTGCCCTCCGCACGATTTCCCTTCTTTCTCCCACTGCCGCGCACACAGCCCTGCGATTTCCCCCTTTCTCCCACAGCTGCCGCACACTGCCGCCCCTAAGATTTCCCCACCTTTTTCCGGACTCCATTTCTCGCCGCAGTAGCTTCCCTGCTCGTGCCCGACTTCGTCTTCTCGCTACAATCGTTTTACTGCTAAACCTTCGCTGA

Protein sequence

MFLPHYFPPFLQHTATALRTISLLSPTAAHTALRFPPFSHSCRTLPPLRFPHLFPDSISRRSSFPARARLRLLATIVLLLNLR*
Homology
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BLAST of CSPI05G00580 vs. ExPASy TrEMBL
Match: A0A0A0KPH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021340 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 41 SCRTLPPLRFPHLFPDSISRRSSFPARARLRLLATIV 78
          +CRTLPPLRFPHLFPDSIS RSSFPARARLRLLATIV
Sbjct: 6  TCRTLPPLRFPHLFPDSISLRSSFPARARLRLLATIV 42

The following BLAST results are available for this feature:
BLAST of CSPI05G00580 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI05G00580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPH11.3e-0994.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021340 PE=4 SV=1[more]
BLAST of CSPI05G00580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI05G00580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G00580.1CSPI05G00580.1mRNA