CSPI03G35490 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G35490
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NDR1/HIN1-like protein 10
Location	Chr3: 30973196 .. 30973771 (-)
RNA-Seq Expression	CSPI03G35490
Synteny	CSPI03G35490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGGTCTATATGGTGTCTTCTAATATCCGTCATTATTGCGTTCGCTATATCTTTTGGGGGGTCTTTATTGATCTTATGGCTTATTTTCATAACCAACAAGATCAAATTCGATGTAACCGATGCCATTCTTACTCAATTCAACTTCACCAACAATGACACTCAACTACATTACAATCTCGGTGTTTTCTTCACCATTAGAAACCCTAATAAGCAAATAGGAATCTACTATGACACCATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCGAGGACTACAAGCTTACTTAAAGGACGATTTCAAGGGCAGCGGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGAGGTCAAATTTCGTCTTTCGTGGAGGTTGAAATTAGGGCTTTATAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTAACTTCTAGTGGAACTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGA

mRNA sequence

ATGGCACGGTCTATATGGTGTCTTCTAATATCCGTCATTATTGCGTTCGCTATATCTTTTGGGGGGTCTTTATTGATCTTATGGCTTATTTTCATAACCAACAAGATCAAATTCGATGTAACCGATGCCATTCTTACTCAATTCAACTTCACCAACAATGACACTCAACTACATTACAATCTCGGTGTTTTCTTCACCATTAGAAACCCTAATAAGCAAATAGGAATCTACTATGACACCATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCGAGGACTACAAGCTTACTTAAAGGACGATTTCAAGGGCAGCGGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGAGGTCAAATTTCGTCTTTCGTGGAGGTTGAAATTAGGGCTTTATAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTAACTTCTAGTGGAACTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGA

Coding sequence (CDS)

ATGGCACGGTCTATATGGTGTCTTCTAATATCCGTCATTATTGCGTTCGCTATATCTTTTGGGGGGTCTTTATTGATCTTATGGCTTATTTTCATAACCAACAAGATCAAATTCGATGTAACCGATGCCATTCTTACTCAATTCAACTTCACCAACAATGACACTCAACTACATTACAATCTCGGTGTTTTCTTCACCATTAGAAACCCTAATAAGCAAATAGGAATCTACTATGACACCATTGAAGCAACTGCAATGTATAAAGGTCAAAACTTTGACACCAGATTGCTAACCCCTTTTTACCAAGGCTCGAGGACTACAAGCTTACTTAAAGGACGATTTCAAGGGCAGCGGGTTGTGGTAATTCCCAACAACACGGTTTCTGAATTAAAGTCTGAGAAACTTTCTGGGGTTTATTCAATTGAGGTCAAATTTCGTCTTTCGTGGAGGTTGAAATTAGGGCTTTATAAATTCATTAGAGTTAGGCCTAAAGTAGGATGTGGTTTCCAAGTTCCATTAACTTCTAGTGGAACTTCTTCTTTTCAGAATGCTATTGGTTGTGATGTTGATTATTGA

Protein sequence

MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQNAIGCDVDY*

Homology

[Close]

BLAST of CSPI03G35490 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-39
Identity = 91/188 (48.40%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 8   LLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTI 67
           L + VII+  +  G + LI WLI     IKF VTDA LT+F+ T+ D  L YNL +   +
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 68  RNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTV 127
           RNPNK+IG+YYD IEA A Y+G+ F T  LTPFYQG + T++L   FQGQ +V+      
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 159

Query: 128 SELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGC-GFQVPL-TSSGTSSFQNA- 187
             L +E++SGVY+IE+KFRL  R KLG  KF R++PKV C   ++PL TS+GT++     
Sbjct: 160 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVF 219

Query: 188 -IGCDVDY 192
            I CD D+
Sbjct: 220 PIKCDFDF 227

[Close]

BLAST of CSPI03G35490 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.2e-32
Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 5   IWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNF--TNNDTQLHYNLG 64
           I  ++ +++I  A+  G + LI+WLIF  N IKF VTDA LT+F    TNN   L YNL 
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLD 103

Query: 65  VFFTIRNPNKQIGIYYDTIEATAMYKGQNFD-TRLLTPFYQGSRTTSLLKGRFQGQRVVV 124
           + FTIRNPN++IG+YYD IE    Y  Q F  +  ++ FYQG + T+++  +  GQ++V+
Sbjct: 104 LNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVL 163

Query: 125 IPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSF 184
           +      +L  +  S +Y I+ K RL  R K GL K  R +PK+ C  +VPLTS+ TS F
Sbjct: 164 LDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGF 223

Query: 185 Q-NAIGCDVDY 192
                 CDVD+
Sbjct: 224 VFQPTKCDVDF 231

[Close]

BLAST of CSPI03G35490 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 74/189 (39.15%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 5   IWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVF 64
           I  L+ +++IA A+  G + LILWLIF  N +KF V DA L +F+F  N+  LHY+L + 
Sbjct: 51  ILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLN 110

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPN 124
           FTIRNPN+++G+YYD    +  Y  Q F +  ++ FYQG + T+++  + +GQ +VV+ +
Sbjct: 111 FTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGD 170

Query: 125 NTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGC-GFQVPL-TSSGTSSFQ 184
              ++LK ++ SG+Y I  K RLS R K    K  +++PK+ C   ++PL +S+ T  F+
Sbjct: 171 GARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFK 230

Query: 185 -NAIGCDVD 191
              + CD D
Sbjct: 231 FQPVQCDFD 238

[Close]

BLAST of CSPI03G35490 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.3e-19
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 33  TNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTIRNPNKQIGIYYDTIEATAMYKGQNF 92
           +N +KF V DA LT F+  +N+  L Y+L +  +IRN    IGI+YD  EAT  Y  Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 93  DTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTVSELKSEKLSGVYSIEVKFRLSWRLK 152
               +  FY GS+ T LL+  F+GQ +V++  N   + + ++ +GVY I+VK  +++R+ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 153 LGLYKFIRVRPKVGCGFQVPLTSSGTSS 181
           +       ++P V C  ++PL    ++S
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

[Close]

BLAST of CSPI03G35490 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 12  VIIAFAISFGGSLLIL---WLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTI- 71
           +   F+  F G LLI+   WLI    + +F +T+A +   N T + T L  N  V  T+ 
Sbjct: 27  LFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHL-LNSSVQLTLF 86

Query: 72  -RNPNKQIGIYYDTIEATAMYKGQNFDTRL-LTPFYQGSRTTSLLKGRFQGQRVVVIPNN 131
            +NPNK++GIYYD +   A Y+GQ   +   L PFYQ     +LL    QG  + V   +
Sbjct: 87  SKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPV-AQS 146

Query: 132 TVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGC----GFQVPLTSSGTSSF 183
              ++  E+ +G   I +K     R K+G +     R  V C     F + +T+   +S 
Sbjct: 147 FGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASL 205

[Close]

BLAST of CSPI03G35490 vs. ExPASy TrEMBL
Match: A0A0A0LEQ7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60
           MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN
Sbjct: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60

Query: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120
           LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV
Sbjct: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120

Query: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180
           VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS
Sbjct: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180

Query: 181 FQNAIGCDVDY 192
           FQNAIGCDVDY
Sbjct: 181 FQNAIGCDVDY 191

[Close]

BLAST of CSPI03G35490 vs. ExPASy TrEMBL
Match: A0A5A7TR00 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001580 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.5e-90
Identity = 167/188 (88.83%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WC LIS+I+  AISFGGS+LILWLIFITNKIKF+VTDA LTQFNFTNNDTQLHYNLGV
Sbjct: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           FFTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRF+GQ+VVVIP
Sbjct: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQN 183
           NNTVSELKSEKLSGVYSI+V+FRLS RLK GL+KFIRVRPKVGCGFQVPL SSG SSFQN
Sbjct: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQN 184

Query: 184 AIGCDVDY 192
           AIGCDVDY
Sbjct: 185 AIGCDVDY 192

[Close]

BLAST of CSPI03G35490 vs. ExPASy TrEMBL
Match: A0A1S3B970 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.5e-90
Identity = 167/188 (88.83%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WC LIS+I+  AISFGGS+LILWLIFITNKIKF+VTDA LTQFNFTNNDTQLHYNLGV
Sbjct: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           FFTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRF+GQ+VVVIP
Sbjct: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQN 183
           NNTVSELKSEKLSGVYSI+V+FRLS RLK GL+KFIRVRPKVGCGFQVPL SSG SSFQN
Sbjct: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQN 184

Query: 184 AIGCDVDY 192
           AIGCDVDY
Sbjct: 185 AIGCDVDY 192

[Close]

BLAST of CSPI03G35490 vs. ExPASy TrEMBL
Match: A0A0A0LGS2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.9e-78
Identity = 149/191 (78.01%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WCLLISVI+AF +SFG ++LILWL+FIT+KIKF+VTDA LTQFNFTNNDTQL YNLG+
Sbjct: 25  SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGI 84

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           +FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRF+GQR VVI 
Sbjct: 85  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIG 144

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS--- 183
           NN VSEL SEKL+GVYSI+VKFRLS RLK G+YK IRVRPKV CGFQVPL  +GTSS   
Sbjct: 145 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 204

Query: 184 FQNAIGCDVDY 192
           FQ+AIGC VDY
Sbjct: 205 FQDAIGCHVDY 215

[Close]

BLAST of CSPI03G35490 vs. ExPASy TrEMBL
Match: A0A1S3B955 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77
Identity = 149/191 (78.01%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WCLLISVI+AF  SFG ++LILWL+FIT+KIKF+VTDA LTQFNFTNNDTQL YNLG+
Sbjct: 3   SLWCLLISVIVAFGASFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGI 62

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           +FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRF+GQR VVI 
Sbjct: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIG 122

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS--- 183
           NN VSELKSEKL+GVYS++VKFRLS RLK G+YK +RVRPKV C FQVPL SSGTSS   
Sbjct: 123 NNKVSELKSEKLAGVYSVDVKFRLSLRLKFGIYKIVRVRPKVECRFQVPLNSSGTSSFPW 182

Query: 184 FQNAIGCDVDY 192
           FQ AIGC VDY
Sbjct: 183 FQEAIGCHVDY 193

[Close]

BLAST of CSPI03G35490 vs. NCBI nr
Match: XP_004136710.2 (uncharacterized protein LOC101218041 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 2.4e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60
           MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN
Sbjct: 211 MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 270

Query: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120
           LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV
Sbjct: 271 LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 330

Query: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180
           VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS
Sbjct: 331 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 390

Query: 181 FQNAIGCDVDY 192
           FQNAIGCDVDY
Sbjct: 391 FQNAIGCDVDY 401

[Close]

BLAST of CSPI03G35490 vs. NCBI nr
Match: KAE8651105.1 (hypothetical protein Csa_001204 [Cucumis sativus])

HSP 1 Score: 364.4 bits (934), Expect = 6.1e-97
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60
           MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN
Sbjct: 1   MARSIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYN 60

Query: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120
           LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV
Sbjct: 61  LGVFFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVV 120

Query: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180
           VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS
Sbjct: 121 VIPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS 180

Query: 181 FQNAI 186
           FQNAI
Sbjct: 181 FQNAI 185

[Close]

BLAST of CSPI03G35490 vs. NCBI nr
Match: XP_008443592.1 (PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 7.2e-90
Identity = 167/188 (88.83%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WC LIS+I+  AISFGGS+LILWLIFITNKIKF+VTDA LTQFNFTNNDTQLHYNLGV
Sbjct: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           FFTIRNPNKQ+GIYYDTI+ATAMYKGQNFDTRLLTPFYQGS TTSLLKGRF+GQ+VVVIP
Sbjct: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSFQN 183
           NNTVSELKSEKLSGVYSI+V+FRLS RLK GL+KFIRVRPKVGCGFQVPL SSG SSFQN
Sbjct: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASSFQN 184

Query: 184 AIGCDVDY 192
           AIGCDVDY
Sbjct: 185 AIGCDVDY 192

[Close]

BLAST of CSPI03G35490 vs. NCBI nr
Match: XP_004136708.1 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.8e-77
Identity = 149/191 (78.01%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WCLLISVI+AF +SFG ++LILWL+FIT+KIKF+VTDA LTQFNFTNNDTQL YNLG+
Sbjct: 3   SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGI 62

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           +FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRF+GQR VVI 
Sbjct: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIG 122

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS--- 183
           NN VSEL SEKL+GVYSI+VKFRLS RLK G+YK IRVRPKV CGFQVPL  +GTSS   
Sbjct: 123 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 182

Query: 184 FQNAIGCDVDY 192
           FQ+AIGC VDY
Sbjct: 183 FQDAIGCHVDY 193

[Close]

BLAST of CSPI03G35490 vs. NCBI nr
Match: XP_008443591.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-77
Identity = 149/191 (78.01%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63
           S+WCLLISVI+AF  SFG ++LILWL+FIT+KIKF+VTDA LTQFNFTNNDTQL YNLG+
Sbjct: 3   SLWCLLISVIVAFGASFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGI 62

Query: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123
           +FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRF+GQR VVI 
Sbjct: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIG 122

Query: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS--- 183
           NN VSELKSEKL+GVYS++VKFRLS RLK G+YK +RVRPKV C FQVPL SSGTSS   
Sbjct: 123 NNKVSELKSEKLAGVYSVDVKFRLSLRLKFGIYKIVRVRPKVECRFQVPLNSSGTSSFPW 182

Query: 184 FQNAIGCDVDY 192
           FQ AIGC VDY
Sbjct: 183 FQEAIGCHVDY 193

[Close]

BLAST of CSPI03G35490 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-40
Identity = 91/188 (48.40%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 8   LLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTI 67
           L + VII+  +  G + LI WLI     IKF VTDA LT+F+ T+ D  L YNL +   +
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 68  RNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTV 127
           RNPNK+IG+YYD IEA A Y+G+ F T  LTPFYQG + T++L   FQGQ +V+      
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 159

Query: 128 SELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGC-GFQVPL-TSSGTSSFQNA- 187
             L +E++SGVY+IE+KFRL  R KLG  KF R++PKV C   ++PL TS+GT++     
Sbjct: 160 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVF 219

Query: 188 -IGCDVDY 192
            I CD D+
Sbjct: 220 PIKCDFDF 227

[Close]

BLAST of CSPI03G35490 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-33
Identity = 81/191 (42.41%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 5   IWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNF--TNNDTQLHYNLG 64
           I  ++ +++I  A+  G + LI+WLIF  N IKF VTDA LT+F    TNN   L YNL 
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLD 103

Query: 65  VFFTIRNPNKQIGIYYDTIEATAMYKGQNFD-TRLLTPFYQGSRTTSLLKGRFQGQRVVV 124
           + FTIRNPN++IG+YYD IE    Y  Q F  +  ++ FYQG + T+++  +  GQ++V+
Sbjct: 104 LNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVL 163

Query: 125 IPNNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSSF 184
           +      +L  +  S +Y I+ K RL  R K GL K  R +PK+ C  +VPLTS+ TS F
Sbjct: 164 LDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGF 223

Query: 185 Q-NAIGCDVDY 192
                 CDVD+
Sbjct: 224 VFQPTKCDVDF 231

[Close]

BLAST of CSPI03G35490 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 134.8 bits (338), Expect = 7.3e-32
Identity = 74/189 (39.15%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 5   IWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVF 64
           I  L+ +++IA A+  G + LILWLIF  N +KF V DA L +F+F  N+  LHY+L + 
Sbjct: 51  ILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLN 110

Query: 65  FTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPN 124
           FTIRNPN+++G+YYD    +  Y  Q F +  ++ FYQG + T+++  + +GQ +VV+ +
Sbjct: 111 FTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGD 170

Query: 125 NTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGC-GFQVPL-TSSGTSSFQ 184
              ++LK ++ SG+Y I  K RLS R K    K  +++PK+ C   ++PL +S+ T  F+
Sbjct: 171 GARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFK 230

Query: 185 -NAIGCDVD 191
              + CD D
Sbjct: 231 FQPVQCDFD 238

[Close]

BLAST of CSPI03G35490 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 131.3 bits (329), Expect = 8.1e-31
Identity = 71/185 (38.38%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 8   LLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTI 67
           ++ +++I   +  G   LILW I   N +KF VT+A LT+F F      LHYN+ + F+I
Sbjct: 53  IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query: 68  RNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTV 127
           RNPN+++GI+YD +E    Y  Q F    +T FYQG + T+++     GQ++V++     
Sbjct: 113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query: 128 SELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPL-TSSGTSSFQ-NAI 187
            + + ++ SGVY I+VK R   R K G      VRPK+ C  +VPL TSS    FQ +  
Sbjct: 173 RDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPT 232

Query: 188 GCDVD 191
            C VD
Sbjct: 233 KCHVD 237

[Close]

BLAST of CSPI03G35490 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-20
Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 33  TNKIKFDVTDAILTQFNFTNNDTQLHYNLGVFFTIRNPNKQIGIYYDTIEATAMYKGQNF 92
           +N +KF V DA LT F+  +N+  L Y+L +  +IRN    IGI+YD  EAT  Y  Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 93  DTRLLTPFYQGSRTTSLLKGRFQGQRVVVIPNNTVSELKSEKLSGVYSIEVKFRLSWRLK 152
               +  FY GS+ T LL+  F+GQ +V++  N   + + ++ +GVY I+VK  +++R+ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 153 LGLYKFIRVRPKVGCGFQVPLTSSGTSS 181
           +       ++P V C  ++PL    ++S
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

The following BLAST results are available for this feature:

BLAST of CSPI03G35490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	2.7e-39	48.40	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	4.2e-32	42.41	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	1.0e-30	39.15	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	5.3e-19	34.46	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q9FI03	2.0e-10	30.94	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of CSPI03G35490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEQ7	1.2e-101	100.00	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 ...	[more]
A0A5A7TR00	3.5e-90	88.83	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00...	[more]
A0A1S3B970	3.5e-90	88.83	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1	[more]
A0A0A0LGS2	8.9e-78	78.01	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 ...	[more]
A0A1S3B955	1.2e-77	78.01	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1	[more]

BLAST of CSPI03G35490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136710.2	2.4e-101	100.00	uncharacterized protein LOC101218041 [Cucumis sativus]	[more]
KAE8651105.1	6.1e-97	100.00	hypothetical protein Csa_001204 [Cucumis sativus]	[more]
XP_008443592.1	7.2e-90	88.83	PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cuc...	[more]
XP_004136708.1	1.8e-77	78.01	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]
XP_008443591.1	2.4e-77	78.01	PREDICTED: protein YLS9-like [Cucumis melo]	[more]

BLAST of CSPI03G35490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	1.9e-40	48.40	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	3.0e-33	42.41	NDR1/HIN1-like 3	[more]
AT3G11650.1	7.3e-32	39.15	NDR1/HIN1-like 2	[more]
AT2G35460.1	8.1e-31	38.38	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	3.8e-20	34.46	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 65..165 e-value: 2.8E-12 score: 47.1
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 7..187
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 7..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G35490.1	CSPI03G35490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane