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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGCTTTATCGAGAATCGCGTTACCATTGCAGAAATGACTTGTGGGTTTCACCAACACGGCTCGCCAGAAGTGACGGAGAGAAGTGGGTTCGTGAGTAACACCTTGAACGTGAGGGTGTCTGCTCGTGTCAACGTGAATTCATAGGGGTCTTTGCCGTCTGAGGCTCGCCGGCCAAGAAGAATGAACAGAAAGGGGGTGGCCGGCCTATGCAAGGGGAAGAAGAAGATTATGAAGGC mRNA sequence ATGGAGCTTTATCGAGAATCGCGTTACCATTGCAGAAATGACTTGTGGGTTTCACCAACACGGCTCGCCAGAAGTGACGGAGAGAAGTGGGTTCGCTCGCCGGCCAAGAAGAATGAACAGAAAGGGGGTGGCCGGCCTATGCAAGGGGAAGAAGAAGATTATGAAGGC Coding sequence (CDS) ATGGAGCTTTATCGAGAATCGCGTTACCATTGCAGAAATGACTTGTGGGTTTCACCAACACGGCTCGCCAGAAGTGACGGAGAGAAGTGGGTTCGCTCGCCGGCCAAGAAGAATGAACAGAAAGGGGGTGGCCGGCCTATGCAAGGGGAAGAAGAAGATTATGAAGGC Protein sequence MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG
Homology
BLAST of CSPI03G24560 vs. ExPASy TrEMBL
Match: A0A0A0LDG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516500 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.7e-24 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 1 MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG 57
MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG
Sbjct: 1 MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG 56
BLAST of CSPI03G24560 vs. NCBI nr
Match: KGN58111.1 (hypothetical protein Csa_017429 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 1 MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG 57
MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG
Sbjct: 1 MELYRESRYHCRNDLWVSPTRLARSDGEKWVRSPAKKNEQKGGGRPMQGEEEDYEG 56
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDG1 | 3.7e-24 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516500 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN58111.1 | 7.6e-24 | 100.00 | hypothetical protein Csa_017429 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 25..56 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 23..56 |
Relationships
The following mRNA feature(s) are a part of this gene:
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