CSPI03G22120 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G22120
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	plastid division protein PDV1
Location	Chr3: 18519552 .. 18521911 (+)
RNA-Seq Expression	CSPI03G22120
Synteny	CSPI03G22120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTCTTTCCTCCTCTTCTTCTTCTTCCCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATCTTCCTTTTTCTTCCCTATTTCCTTTTCCTTCTTTTAATTCTCTCGTTTCTTTAGTTTTTCAGTCGGTAGAGACAACAGGACAAGTTTTGTTTTCGATATTATTTGGGATTTCCATTATTGCCCAAACAAACAGATTATGTACTCATAGCTCTATGTTTGCGATTCAATTACGTGATTTTTCTTCATTTTCAGTAGGGATAGATTCGGCAGTGTACGAATTTCTTTGTTGTCTGCTGTCTGGAAGACTGAAGGGAAGAGTTCCTTCTAGGTTCACTATTCTTTGCCTTCCTTGATTTTTCTTCATTTGTGCTGTCTATGTCCATTTTTCCTGAAGATTGGACGGGGTTGCTAATTTCTTAACGTTGACTGTTTACTTTGGTTTCTGATTATTGGATGCTTGTGTAGATTATGATTTTAGGTAGTCGTACGGCAGTTTCCTTTTCATTTTTTGAAATTAAGATTTCAAGCTTAGTAGAATTAGGGATAACAACTGTATGTCCATCATAGAATTTTCTACTTTGATGTTTGAATAAATGAAAGTATGTAATCACACAAAACGGCTCCGTAATTCTATTGAAAAAGATGAACAGATTCCTATCAAATTGTGAAAGAACCATTTTTGGTCCAATCATAGTGCCATTGGGGCGCCACTAAAGAGTAGTAGTACTTGGTGTATCCCAAGATGCACCCATCTCACACACGCGCAAGAATTAAAATCGTGGAAATTTTCTCCTTTTAGTCCGTCCTGAATGGTTTCCATTTAACCAAGTTCTTTTCTTTTTTCGAAGAATAAACTATAATTTAGAACAATGGAAGCTTTCGTTCCTATAGAAATCATGACTCTTATATTATTTAACGCCACGAGTCATTCAGTGACTAGTTAAGAATAAATAGCAGCAAATTGTTTTGAATAGAGGCTCCTAAGCAATGGAAGCTCGGTTTATTGGTTTGCTCTTGATTTTTTATTTCATTTTGCTCAACTAAAGCTCAGTTTCTTACCAGAGAACTTGCAACTTCATGTTCTGCATTTAAATGAAAGCAGTAGTGTGCTGCATTCTTATGTTCCTTCTCACTTATAGGGTTATGTTGTTAACTATTTCATTGAAGTGAATATTGACTGGACAATTGACTCACTGGATTCTTTCTTTTTTATTTTCAGACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGATGTCTTATCCGCCAGGGGTTAGTGTGAATATATAAAAATTTTCAAGCTTTGATGCATCTCTTATCAGTTGATTTAAATATGAGCTGGCTGTTTGATAATGTCTGTTGTATGAAAATGATTTGATTTAATAGTTAGAAATTTTCTTCATCATTCTTGAGGTTGTAATTGTCTATTGAATTGAGAGCTTTAAATCTTGAGTCCACTGAGTTGTTCAACAAACAAAAACAATTATGATTGGAATACCAAAACTTCTAGCTTGCCTCAAGTTATGAAGCAAGGATATGCCTGTTGGGCCTGATTTGAACCCTCTCCCCATTTGGGCTTGAACATGGAA

mRNA sequence

CTCATTCTTTCCTCCTCTTCTTCTTCTTCCCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGATGTCTTATCCGCCAGGGGTTAGTGTGAATATATAAAAATTTTCAAGCTTTGATGCATCTCTTATCAGTTGATTTAAATATGAGCTGGCTGTTTGATAATGTCTGTTGTATGAAAATGATTTGATTTAATAGTTAGAAATTTTCTTCATCATTCTTGAGGTTGTAATTGTCTATTGAATTGAGAGCTTTAAATCTTGAGTCCACTGAGTTGTTCAACAAACAAAAACAATTATGATTGGAATACCAAAACTTCTAGCTTGCCTCAAGTTATGAAGCAAGGATATGCCTGTTGGGCCTGATTTGAACCCTCTCCCCATTTGGGCTTGAACATGGAA

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGATGTCTTATCCGCCAGGGGTTAG

Protein sequence

MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNTPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG*

Homology

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BLAST of CSPI03G22120 vs. ExPASy Swiss-Prot
Match: Q9FK13 (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.4e-66
Identity = 148/278 (53.24%), Postives = 191/278 (68.71%), Query Frame = 0


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNN-NNNKDSNNTPI 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S+   N + N   +  P 
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRP- 62

Query: 64  PLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAA 123
                  + FI  F VD +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D A
Sbjct: 63  ------GYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVA 122

Query: 124 IARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKP 183
           IARLEQSRILLAMRLAEHHGKNY V+ EALAFVG ++  ++YVS ++      +P+G   
Sbjct: 123 IARLEQSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANS 182

Query: 184 LPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAP 243
           +P+  + SN +I    ST  FA+++L  +HV G+LGNAA+ AIS+VA LHLHQVA     
Sbjct: 183 IPDGIE-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHH 242

Query: 244 LERDDIPFNRN-LRRTSRLKESSSNEDFSNFDVLSARG 280
           L++ +  F R+  R+T    +SS++    + DV+ ARG
Sbjct: 243 LQKKEDRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CSPI03G22120 vs. ExPASy Swiss-Prot
Match: Q9XII1 (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.1e-04
Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 5   MEIEE-IEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNTPIP 64
           ME EE I  +L +  +L  K+S+ I +       +ST      D N + +  +   + I 
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDN-------SSTTVSDNGDGNEDLSPGEGRKSEII 60

Query: 65  LPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAI 124
                 F  I     D+D++   EA  L  IR ALE LE QL     ++ +QQ E+  A+
Sbjct: 61  GNQDKDFDSISS--EDVDEA---EAERLLRIRDALEALESQLASLQNLRQRQQYEKQLAL 120

Query: 125 ARLEQSRILLAMRLAEHHGKNYKVISEALAFVGD 158
           + ++ SR +L  +L E+ GK+++V+ E   F G+
Sbjct: 121 SEIDYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

[Close]

BLAST of CSPI03G22120 vs. ExPASy TrEMBL
Match: A0A0A0LCS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 2.4e-148
Identity = 278/279 (99.64%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD NNNNNNKDSNNT
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD-NNNNNNKDSNNT 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ
Sbjct: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CSPI03G22120 vs. ExPASy TrEMBL
Match: A0A5D3E713 (Plastid division protein PDV1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G00010 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.5e-145
Identity = 269/279 (96.42%), Postives = 273/279 (97.85%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKSDNNNNNNNKDSNN 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTA+FPFI EFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYAANYVS ENKDGPKFSP GQ
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFST+DFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPF+RNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of CSPI03G22120 vs. ExPASy TrEMBL
Match: A0A1S3AYK3 (plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.5e-145
Identity = 269/279 (96.42%), Postives = 273/279 (97.85%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKSDNNNNNNNKDSNN 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTA+FPFI EFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYAANYVS ENKDGPKFSP GQ
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFST+DFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPF+RNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of CSPI03G22120 vs. ExPASy TrEMBL
Match: A0A6J1CG84 (plastid division protein PDV1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011397 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 224/280 (80.00%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNN-NKDSNN 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFL STK+LRKS N ++   N  +++
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  TPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVER 120
            P     +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQVER
Sbjct: 61  NP-----SAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVER 120

Query: 121 DAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNG 180
           DAAIARLEQSRI+LAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VS EN+ GP FSPNG
Sbjct: 121 DAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNG 180

Query: 181 QKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 240
           QK +PNSSKRSNTLIKMLFST +FA+KSLKMD+VGGIL NAAMVAISM+AFLHLHQVA+K
Sbjct: 181 QKLMPNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFK 240

Query: 241 AAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
            +  ERDD PFNRNLRRTS+L+ SS NED  NFDVLSARG
Sbjct: 241 QSSQERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 275

[Close]

BLAST of CSPI03G22120 vs. ExPASy TrEMBL
Match: A0A6J1CGU5 (plastid division protein PDV1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011397 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 4.3e-113
Identity = 224/281 (79.72%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNN-NKDSNN 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFL STK+LRKS N ++   N  +++
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  TPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFH-TVQVQQQVE 120
            P     +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF H TVQVQQQVE
Sbjct: 61  NP-----SAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHQTVQVQQQVE 120

Query: 121 RDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPN 180
           RDAAIARLEQSRI+LAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VS EN+ GP FSPN
Sbjct: 121 RDAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPN 180

Query: 181 GQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAY 240
           GQK +PNSSKRSNTLIKMLFST +FA+KSLKMD+VGGIL NAAMVAISM+AFLHLHQVA+
Sbjct: 181 GQKLMPNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAF 240

Query: 241 KAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           K +  ERDD PFNRNLRRTS+L+ SS NED  NFDVLSARG
Sbjct: 241 KQSSQERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 276

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: XP_004149455.1 (plastid division protein PDV1 [Cucumis sativus] >KGN57871.1 hypothetical protein Csa_011739 [Cucumis sativus])

HSP 1 Score: 534.6 bits (1376), Expect = 5.0e-148
Identity = 278/279 (99.64%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD NNNNNNKDSNNT
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD-NNNNNNKDSNNT 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ
Sbjct: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: XP_008439328.2 (PREDICTED: plastid division protein PDV1 [Cucumis melo] >KAA0033742.1 plastid division protein PDV1 [Cucumis melo var. makuwa] >TYK31702.1 plastid division protein PDV1 [Cucumis melo var. makuwa])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 269/279 (96.42%), Postives = 273/279 (97.85%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKSDNNNNNNNKDSNN 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTA+FPFI EFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYAANYVS ENKDGPKFSP GQ
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFST+DFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPF+RNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: XP_038878155.1 (plastid division protein PDV1 [Benincasa hispida])

HSP 1 Score: 464.5 bits (1194), Expect = 6.3e-127
Identity = 243/279 (87.10%), Postives = 259/279 (92.83%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKSD      NKDS NT
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSD------NKDSINT 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           P  LP+TA+FPFI+EFR+DLDDSAIQEARSLN+IRTALENLEDQ EFFHTV+VQQQVERD
Sbjct: 61  PDALPNTAVFPFINEFRIDLDDSAIQEARSLNSIRTALENLEDQFEFFHTVKVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYAANYVS EN+ GP+FS + Q
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENQYGPEFSTSSQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KP+ NSSKRSNT I+MLFSTL+FARKSLKMDHVGGILGNAAMVAISM+AFLHLHQVAYK 
Sbjct: 181 KPVSNSSKRSNTRIQMLFSTLNFARKSLKMDHVGGILGNAAMVAISMLAFLHLHQVAYKE 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
            PLERD+IPFNRNLRRTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 PPLERDNIPFNRNLRRTSRLEESSPNEDFSNFDVLSARG 273

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: XP_022140820.1 (plastid division protein PDV1 isoform X2 [Momordica charantia])

HSP 1 Score: 422.2 bits (1084), Expect = 3.6e-114
Identity = 224/280 (80.00%), Postives = 248/280 (88.57%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNN-NKDSNN 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFL STK+LRKS N ++   N  +++
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  TPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVER 120
            P     +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQVER
Sbjct: 61  NP-----SAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVER 120

Query: 121 DAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNG 180
           DAAIARLEQSRI+LAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VS EN+ GP FSPNG
Sbjct: 121 DAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNG 180

Query: 181 QKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 240
           QK +PNSSKRSNTLIKMLFST +FA+KSLKMD+VGGIL NAAMVAISM+AFLHLHQVA+K
Sbjct: 181 QKLMPNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFK 240

Query: 241 AAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
            +  ERDD PFNRNLRRTS+L+ SS NED  NFDVLSARG
Sbjct: 241 QSSQERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 275

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: XP_022140819.1 (plastid division protein PDV1 isoform X1 [Momordica charantia])

HSP 1 Score: 417.5 bits (1072), Expect = 8.8e-113
Identity = 224/281 (79.72%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNN-NKDSNN 60
           MKWDMEIEEIEAVLEKIWD+HDKLSEAIHSISRDHFL STK+LRKS N ++   N  +++
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  TPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFH-TVQVQQQVE 120
            P     +A FPF+ EFR+D+DDSAIQEARSLNAIRTALENLEDQLEF H TVQVQQQVE
Sbjct: 61  NP-----SAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHQTVQVQQQVE 120

Query: 121 RDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPN 180
           RDAAIARLEQSRI+LAMRLAEHHGKNYKVI+EALAFVGDVRY AN+VS EN+ GP FSPN
Sbjct: 121 RDAAIARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPN 180

Query: 181 GQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAY 240
           GQK +PNSSKRSNTLIKMLFST +FA+KSLKMD+VGGIL NAAMVAISM+AFLHLHQVA+
Sbjct: 181 GQKLMPNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAF 240

Query: 241 KAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           K +  ERDD PFNRNLRRTS+L+ SS NED  NFDVLSARG
Sbjct: 241 KQSSQERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 276

[Close]

BLAST of CSPI03G22120 vs. TAIR 10
Match: AT5G53280.1 (plastid division1 )

HSP 1 Score: 252.3 bits (643), Expect = 4.6e-67
Identity = 148/278 (53.24%), Postives = 191/278 (68.71%), Query Frame = 0


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNN-NNNKDSNNTPI 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S+   N + N   +  P 
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRP- 62

Query: 64  PLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAA 123
                  + FI  F VD +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D A
Sbjct: 63  ------GYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVA 122

Query: 124 IARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKP 183
           IARLEQSRILLAMRLAEHHGKNY V+ EALAFVG ++  ++YVS ++      +P+G   
Sbjct: 123 IARLEQSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANS 182

Query: 184 LPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAP 243
           +P+  + SN +I    ST  FA+++L  +HV G+LGNAA+ AIS+VA LHLHQVA     
Sbjct: 183 IPDGIE-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHH 242

Query: 244 LERDDIPFNRN-LRRTSRLKESSSNEDFSNFDVLSARG 280
           L++ +  F R+  R+T    +SS++    + DV+ ARG
Sbjct: 243 LQKKEDRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CSPI03G22120 vs. TAIR 10
Match: AT2G16070.2 (plastid division2 )

HSP 1 Score: 47.0 bits (110), Expect = 2.9e-05
Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 5   MEIEE-IEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNTPIP 64
           ME EE I  +L +  +L  K+S+ I +       +ST      D N + +  +   + I 
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDN-------SSTTVSDNGDGNEDLSPGEGRKSEII 60

Query: 65  LPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAI 124
                 F  I     D+D++   EA  L  IR ALE LE QL     ++ +QQ E+  A+
Sbjct: 61  GNQDKDFDSISS--EDVDEA---EAERLLRIRDALEALESQLASLQNLRQRQQYEKQLAL 120

Query: 125 ARLEQSRILLAMRLAEHHGKNYKVISEALAFVGD 158
           + ++ SR +L  +L E+ GK+++V+ E   F G+
Sbjct: 121 SEIDYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

The following BLAST results are available for this feature:

BLAST of CSPI03G22120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK13	6.4e-66	53.24	Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1	[more]
Q9XII1	4.1e-04	29.87	Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1	[more]

BLAST of CSPI03G22120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS6	2.4e-148	99.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1	[more]
A0A5D3E713	5.5e-145	96.42	Plastid division protein PDV1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3AYK3	5.5e-145	96.42	plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1	[more]
A0A6J1CG84	1.7e-114	80.00	plastid division protein PDV1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CGU5	4.3e-113	79.72	plastid division protein PDV1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CSPI03G22120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149455.1	5.0e-148	99.64	plastid division protein PDV1 [Cucumis sativus] >KGN57871.1 hypothetical protein...	[more]
XP_008439328.2	1.1e-144	96.42	PREDICTED: plastid division protein PDV1 [Cucumis melo] >KAA0033742.1 plastid di...	[more]
XP_038878155.1	6.3e-127	87.10	plastid division protein PDV1 [Benincasa hispida]	[more]
XP_022140820.1	3.6e-114	80.00	plastid division protein PDV1 isoform X2 [Momordica charantia]	[more]
XP_022140819.1	8.8e-113	79.72	plastid division protein PDV1 isoform X1 [Momordica charantia]	[more]

BLAST of CSPI03G22120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53280.1	4.6e-67	53.24	plastid division1	[more]
AT2G16070.2	2.9e-05	29.87	plastid division2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..62
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 1..279
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	PLASTID DIVISION PROTEIN PDV2	coord: 1..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22120.1	CSPI03G22120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0016021	integral component of membrane