CSPI03G04870 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G04870
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Small ubiquitin-related modifier
Location	Chr3: 3959478 .. 3961747 (-)
RNA-Seq Expression	CSPI03G04870
Synteny	CSPI03G04870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGATTTGTGAATCCATAGACACATCCTGGCCGTCCATTTAGAACCTCAAAACCTCCACCCACTTTCCCTTTGAAGACTCAGAGTCACATATAGTGCAAAACCAAGGCGAACTAAGCACTTCCAGATTTTCCCAACCCTTCTTCTTTACAAACAAACCCCACCCAAAATTTCCCTTCTTCCAACTTCAAATAATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGTTTTTTCATCTTCCAAACCTTATGAGGATCATTTTCTTTTCTTCCCTTTTTTTTTTTTTTTGTGTGTGTTTTCTTGGGCTGGTTATGATTTTAAGTTGGTTCGATCCATTTCTTACGTTCTACTCTGTAATGGGTTGTGTGGAATTTGCATGCTTTTTGTCCTGGATCGTTCTAGTGATTTTGGGTTTTGTTTGTTCTCTGTTGAAAATTTATTAGAATTTTGGCTTTTGTATGATGGGGTTTTTCTTAGTTTTAAATTTGATGGAATACTTATAGGGTGAACGATCAGATGTATGTTTAGCTGTGAATGATCTATTGGGAAACTTTTGCATGAAACTTTGAATTTGGACTATAATCTCACTCAATACTTCAAAGGCTTACCAATGGGTCAGATCACAGGACTTTTGTTATGCATGTTGCTCTGCATACAGTGAGATTGTAAGCGATTCAAGTTGGGATTCTTTCAATCTACATTCTCTACCTCTTGAGTTTTGGTTGAGTTGACAGTTTTTGCCTTACATATGGTCTCTTCGTTACTCATTTTGTATTGGGGAGAAGGAAAATGCAGCAATGGTTTATTTTATCTTGCTTTGCCTGGTCCCTTATAGTTCTTCCATGTGGGTTTTAGCTATGTTCTTCTTTTCCCTCCAAGATTTGAGATGTTCAATCTGTGAAGCTTTTTTTTTCAACTAATGGAAGGAGTTTTGTATTACAATTGGGCCCAAAATGCATAATCCAAACATGGGTTTTGGATTACGATCACATTACAATCCCATAACATTACGGCCCCCAAACAGCCCCTAAGTCAATAAAACTTTTCTTGAATATGCGATCTTCCTTTGTGTGTTTCTTATCCTCTTGTCTGCTGGCCATGTTTCTATAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGATTGCGTGCAGAGCAGACTCCGGAAGAGGTATCGTGCCATCCCTTTCATTGCCTCAGAAATTAACCCATAATAACTGTTTTCTAGTTTCGTTTTCATACGTTATTTGTGTACGATCACAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAAGTTAACCTCGAAGACAAAATAGTTCCTCAAACATCATTCGCAATCCTATAATTTTCTTACTACTGCTAGTATATGCCTGAAATTCTGCTGCTGGATGTTGCTTTTGTCTATATAAATTATGTCTACGATTTCTGCCTCTTCCAGTTCTCTAGAAGTGAAAGAGACTATGTTGGGACTCCTTTATATACGTAAATGCTGTTGATGTCGATTCCTCCTGTTTCATTTTTCTGAGTACATCCTGAAGTTACAATGTGATTATGTTTGGCTTGTGTATCTTTGTTTCTGGGACATGAAACTTTCAAAAAGGTAAAATAACAGTTCTTGTGAAGGAGCTTCAAAGATTTTTAGCGTACGTGCATCTCAACTAATCTCATGGAACAATCGTCTCATTCTACAATAACCCTAGGTAGGTGGCTGCGAAAAGGATCTTTAGAGTATAACACGGTTTTACCAAGAAGGCTTAATTCTGCCATGTGCCTACTGTACTCAAAGCTTGGGAAGTTAATAAGCATATTGAAAGATGGACATTGTTTTTCAAAGCAGTACAAGGTATAATGTTCACTGCCTTTAATGTTGTAGAAAGTCCCAAAATCATGAAGAAAAGAAGGTTTTGGTGTGGAGTGCAGGTAAGTTGTTATCTGTCTCATAATGAATCTGAAAATGGGTACTACTTTATTTTAATGAATAAACAACTGAAAAATATTGATCAAGAAAGCACTTTGCTTTGCTATTTGATGAATCACAAAAGGTAATATTCTTTCTTTAGAGGTAGTTTGTTTGCTGGAGAAGCACAGAAC

mRNA sequence

GTTGGATTTGTGAATCCATAGACACATCCTGGCCGTCCATTTAGAACCTCAAAACCTCCACCCACTTTCCCTTTGAAGACTCAGAGTCACATATAGTGCAAAACCAAGGCGAACTAAGCACTTCCAGATTTTCCCAACCCTTCTTCTTTACAAACAAACCCCACCCAAAATTTCCCTTCTTCCAACTTCAAATAATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGATTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAAGTTAACCTCGAAGACAAAATAGTTCCTCAAACATCATTCGCAATCCTATAATTTTCTTACTACTGCTAGTATATGCCTGAAATTCTGCTGCTGGATGTTGCTTTTGTCTATATAAATTATGTCTACGATTTCTGCCTCTTCCAGTTCTCTAGAAGTGAAAGAGACTATGTTGGGACTCCTTTATATACGTAAATGCTGTTGATGTCGATTCCTCCTGTTTCATTTTTCTGAGTACATCCTGAAGTTACAATGTGATTATGTTTGGCTTGTGTATCTTTGTTTCTGGGACATGAAACTTTCAAAAAGGTAAAATAACAGTTCTTGTGAAGGAGCTTCAAAGATTTTTAGCGTACGTGCATCTCAACTAATCTCATGGAACAATCGTCTCATTCTACAATAACCCTAGGTAGGTGGCTGCGAAAAGGATCTTTAGAGTATAACACGGTTTTACCAAGAAGGCTTAATTCTGCCATGTGCCTACTGTACTCAAAGCTTGGGAAGTTAATAAGCATATTGAAAGATGGACATTGTTTTTCAAAGCAGTACAAGGTATAATGTTCACTGCCTTTAATGTTGTAGAAAGTCCCAAAATCATGAAGAAAAGAAGGTTTTGGTGTGGAGTGCAGGTAAGTTGTTATCTGTCTCATAATGAATCTGAAAATGGGTACTACTTTATTTTAATGAATAAACAACTGAAAAATATTGATCAAGAAAGCACTTTGCTTTGCTATTTGATGAATCACAAAAGGTAATATTCTTTCTTTAGAGGTAGTTTGTTTGCTGGAGAAGCACAGAAC

Coding sequence (CDS)

ATGTCGGGTGTCACCAACCAAGAAGAGGACAAGAAACCTACCGATCAATCAGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAGGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGATTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATTGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGCTATTATCTAA

Protein sequence

MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII*

Homology

[Close]

BLAST of CSPI03G04870 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-43
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 6  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFD 65
          NQEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFD
Sbjct: 4  NQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFD 63

Query: 66 GRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG 98
          GRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Sbjct: 64 GRRLRAEQTPDELDMEDGDEIDAMLHQTGGSG 95

[Close]

BLAST of CSPI03G04870 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 8.9e-42
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 8  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 67
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 68 RLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          RLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGGG 93

[Close]

BLAST of CSPI03G04870 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.2e-39
Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 8  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 67
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 68 DGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
          DGRRLR EQTP+ELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of CSPI03G04870 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 2   SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIA 61
           +G T+Q++ K  T+   HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ 
Sbjct: 21  TGDTSQQDVKPSTE---HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLR 80

Query: 62  FLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
           FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Sbjct: 81  FLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]

BLAST of CSPI03G04870 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 5.6e-20
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 9  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 68
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 69 RRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
           R+   +TP+EL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of CSPI03G04870 vs. ExPASy TrEMBL
Match: A0A0A0L2Y3 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_3G073930 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 101
           AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Sbjct: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 100

[Close]

BLAST of CSPI03G04870 vs. ExPASy TrEMBL
Match: A0A1S3BKS1 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103491091 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 101
           AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Sbjct: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 100

[Close]

BLAST of CSPI03G04870 vs. ExPASy TrEMBL
Match: A0A6J1DX09 (Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111025229 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSI
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVELNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 101
           AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Sbjct: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGTII 100

[Close]

BLAST of CSPI03G04870 vs. ExPASy TrEMBL
Match: A0A6A1VQH5 (Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 99
          AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61 AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAVA 98

[Close]

BLAST of CSPI03G04870 vs. ExPASy TrEMBL
Match: A0A2I4DY72 (Small ubiquitin-related modifier OS=Juglans regia OX=51240 GN=LOC108984556 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 99
          AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61 AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAVA 98

[Close]

BLAST of CSPI03G04870 vs. NCBI nr
Match: XP_004149348.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_008449142.2 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KGN56103.1 hypothetical protein Csa_011007 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 101
           AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII
Sbjct: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 100

[Close]

BLAST of CSPI03G04870 vs. NCBI nr
Match: XP_038905908.1 (small ubiquitin-related modifier 1 [Benincasa hispida])

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 101
           AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA+I
Sbjct: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAVI 100

[Close]

BLAST of CSPI03G04870 vs. NCBI nr
Match: XP_022158763.1 (small ubiquitin-related modifier 1-like [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 4.0e-47
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSI
Sbjct: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVELNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGAII 101
           AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG II
Sbjct: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGTII 100

[Close]

BLAST of CSPI03G04870 vs. NCBI nr
Match: XP_018812104.1 (small ubiquitin-related modifier 1 [Juglans regia] >XP_040988284.1 small ubiquitin-related modifier 1 [Juglans microcarpa x Juglans regia] >XP_042950623.1 small ubiquitin-related modifier 1 [Carya illinoinensis] >KAB1215151.1 Small ubiquitin-related modifier 1 [Morella rubra] >KAG2682371.1 hypothetical protein I3760_11G188300 [Carya illinoinensis] >KAG6637670.1 hypothetical protein CIPAW_11G193900 [Carya illinoinensis] >KAG6689772.1 hypothetical protein I3842_11G191100 [Carya illinoinensis] >KAG7957712.1 hypothetical protein I3843_11G189000 [Carya illinoinensis])

HSP 1 Score: 190.3 bits (482), Expect = 8.3e-45
Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 99
          AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61 AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGAVA 98

[Close]

BLAST of CSPI03G04870 vs. NCBI nr
Match: XP_023895256.1 (small ubiquitin-related modifier 1 [Quercus suber] >XP_030928996.1 small ubiquitin-related modifier 1 [Quercus lobata] >XP_030930287.1 small ubiquitin-related modifier 1 [Quercus lobata])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 93/98 (94.90%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD++SI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDISSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGA 99
          AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  A
Sbjct: 61 AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGATA 98

[Close]

BLAST of CSPI03G04870 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 174.9 bits (442), Expect = 3.4e-44
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0


Query: 6  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFD 65
          NQEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFD
Sbjct: 4  NQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFD 63

Query: 66 GRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG 98
          GRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Sbjct: 64 GRRLRAEQTPDELDMEDGDEIDAMLHQTGGSG 95

[Close]

BLAST of CSPI03G04870 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 170.6 bits (431), Expect = 6.3e-43
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 8  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 67
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 68 RLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          RLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGGG 93

[Close]

BLAST of CSPI03G04870 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 161.4 bits (407), Expect = 3.8e-40
Identity = 85/102 (83.33%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 8   EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 67
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 68  VDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
           VD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGG 106

[Close]

BLAST of CSPI03G04870 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 98.2 bits (243), Expect = 4.0e-21
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 9  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 68
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 69 RRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
           R+   +TP+EL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

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BLAST of CSPI03G04870 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 10 DKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 69
          DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5  DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 70 RAEQTPEELEMEDGDEIDAMLHQTGG 96
          +  QTP EL +ED DEI+A   Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:

BLAST of CSPI03G04870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	4.7e-43	92.39	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	8.9e-42	95.51	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	9.2e-39	87.91	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	1.4e-23	56.38	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	5.6e-20	53.93	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of CSPI03G04870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Y3	1.0e-48	100.00	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_3G073930 PE=3...	[more]
A0A1S3BKS1	1.0e-48	100.00	Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103491091 PE=3 SV...	[more]
A0A6J1DX09	1.9e-47	97.00	Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111025229 ...	[more]
A0A6A1VQH5	4.0e-45	95.92	Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 ...	[more]
A0A2I4DY72	4.0e-45	95.92	Small ubiquitin-related modifier OS=Juglans regia OX=51240 GN=LOC108984556 PE=3 ...	[more]

BLAST of CSPI03G04870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149348.1	2.1e-48	100.00	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_008449142.2 PREDICTED: ...	[more]
XP_038905908.1	2.7e-48	99.00	small ubiquitin-related modifier 1 [Benincasa hispida]	[more]
XP_022158763.1	4.0e-47	97.00	small ubiquitin-related modifier 1-like [Momordica charantia]	[more]
XP_018812104.1	8.3e-45	95.92	small ubiquitin-related modifier 1 [Juglans regia] >XP_040988284.1 small ubiquit...	[more]
XP_023895256.1	1.4e-44	94.90	small ubiquitin-related modifier 1 [Quercus suber] >XP_030928996.1 small ubiquit...	[more]

BLAST of CSPI03G04870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	3.4e-44	92.39	small ubiquitin-like modifier 1	[more]
AT5G55160.1	6.3e-43	95.51	small ubiquitin-like modifier 2	[more]
AT5G55160.2	3.8e-40	83.33	small ubiquitin-like modifier 2	[more]
AT5G55170.1	4.0e-21	53.93	small ubiquitin-like modifier 3	[more]
AT5G55856.1	2.0e-20	52.33	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 20..91 e-value: 1.4E-14 score: 64.4
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 18..95 score: 15.993241
None	No IPR available	GENE3D	3.10.20.90		coord: 2..95 e-value: 1.4E-40 score: 140.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 1..96
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 1..96
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 18..91 e-value: 1.10412E-48 score: 147.375
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 20..90 e-value: 2.1E-25 score: 88.3
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 8..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G04870.1	CSPI03G04870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030245	cellulose catabolic process
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008810	cellulase activity
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding