CSPI03G02230 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G02230
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionE3 ubiquitin-protein ligase RNF34
LocationChr3: 1669702 .. 1672192 (+)
RNA-Seq ExpressionCSPI03G02230
SyntenyCSPI03G02230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGTTTTTGGGCAGTTGACTCTTTGCTAAACCCTACTTCACGTTCAGCTATTGCTGCCCAACCTCCCGTCCCAGTGGGTGCCGGAGGTCTTGTTAGGACGTCTATTCACCTCTCCCTTCCTTCCTCACCTGGAAAAGTGCTTCCGGCTGCTGCTCTCATTGCCGACGCCACACCTTTGCTGTTGTGACCAGGTTCATCCCACTTTCTCCGCTCCTCAGTCTCTCAATTTACCTCTTATTCTTCTAAATTTGATGGTTGAAGGACTTCTTTTTCTTCGCAGCTAGAAGAAGGGAAAGATGCGGCATCCCAGCAAGGATCTTTTATATTTGGAGCGGAAAGATTTATCCTCTTCGTCTTTAGGTGTTTTTAATGGTCGAATTTTCTTCGTTTTTAACCTATATTGAATGTTAGGATTAGTACTTGTTTATTAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTTGTATCAGAATCCTCACTGCTAGTTTGTAAAAAAAACTCAACGTCCAAGGAGCCTACTCGGAATGAAAAACCCATTACAGAATCAGCTTCAAAAAGCTTAGGTACCTACTTCCCTTTTGATTTTGATTTTGATTTTTTTTTAAAATCTGCTTTTATTTTCTTTGCTGCTTATTATAGTTTGAAATCTGGACACGTGCTTAGAATTTTCACTGCATTCACATTTAGAAGTCTAATTGCAAACACGAGCACACCCGTTGAGTCATAATTTTGTGTTTAATGTTGCCTAGATTTTAAAGTTTAGGATTATGTTAGCTTAGTCAAGTAGTACAAATTATTTGACCAATGATTCTCTTCCCCAATTAGGTAATACTTAGTTGTATCCTCAGCTGTTGTGTATCTCATTCAATTTGTTCAATCATTGTTTACCTTGTGGTAAACGCTTCATACCTAAGATCTGTGTTTGTTGCAAAATCCATGCATGGGCATGGATGCCTGATGGCTGGCTAGGAAATACTCACTGGCTGTTGTCCTTTTCTTGGTTTTCTCATTGTCTGGAAGTATATGGGTTTTTTTAGTTTCAGTTTTTATAGCTTTTGCAAGTTGTGTTCTGTTTTCGCTTATGCAAGTGATGATGTGAATTTCCAGTTGTTGGTTTAAAACTTTGAGTATTATGCAGTTTGAAGTGATATTTAGTGGTTGGAATAATACTGACTATATAACATGTAGTGTTGTTAAGTTACCAACTATTGCTAACTTCATAGCACTATTATGAGATGTAATGTAGAGGTTGTTTGTAGCAACTGTTTCCGACTATATAACATCTTGCACTTCAGCTGGAAACTTATCTCCCATGTTTATGTCAGTACTGCCTTTGGAACATAGAACATTCAGCATCAAATTTGAATATATTATAGTGCTTGCGGTGCTTGTTTCCTCTAAGGAGTTGCTTGCTCACTTCCTTTTCACTTATTGTAGTATTGGGAAGAGTCAAAGACTTCTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCAAAGGTTTGTATATTGACCAACTACTACTTAAAAAAACATTCATTGTTCCTGATAGATACATTCTTGTTAATTGTCATAGGAAAATGCTGAAAAATATGATATCGAAGCCTTAGATGGCAATGAATCAGAAGTGATTCAATTGGTAAGTTACTTTTCCTTGTAAGTTGTGTCGTAGACGTGGTAGCTTGGTTTCTCATTATTTTTAATGTCATAATTCGATCTAAATAGGACCTGATGTTGGGTATTGCTGATCTTCATACTCCTGAAGCTGTGACTGCTGCTGAATCTGCAATAATTGGAAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATCATGATAACGATGACAATGAAAAGAGCGATGATCAGAAGACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCAAATTCTAGAAAAACAAGCTGTAGAAGTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAAGATCCATCTTTTTTATCGGACCTGTTGCGTCAATATGGATGCATTGTGGTTTGAAAGTTTTATTCACGGTGGAGGGTATATGAAGTTTCTGAAGCTTGTTCTGACAAAATCTCCAAGGTTGCGATTGCTAGCCTAAACCTTTGAAGCTTGGGCGGTGTGAACTGATCTTTGCTCGGCCTTGGGATTTTTAGATATTTCTCTTGTCAACTTTATCACAATTTCAAGTGCAGGAAAGGTGCCGTTTCTATGCATTTCTATTAGGAAATGTAATAGATTTTAAGTTGTAACTAGTGTTGGTCAGTTTCACAATTTTGGTTTGTATTGATGATGTCGAATTTCGATGTTTTAAAAATGGCCCTTTTATATATATGTACGTTGTAGCTTCAAATAAGTTAAATAGTTTAGAAGAAGGTTTTTTGAATGGTAAGAAG

mRNA sequence

ATTTGTTTTTGGGCAGTTGACTCTTTGCTAAACCCTACTTCACGTTCAGCTATTGCTGCCCAACCTCCCGTCCCAGTGGGTGCCGGAGGTCTTGTTAGGACGTCTATTCACCTCTCCCTTCCTTCCTCACCTGGAAAAGTGCTTCCGGCTGCTGCTCTCATTGCCGACGCCACACCTTTGCTGTTGTGACCAGCTAGAAGAAGGGAAAGATGCGGCATCCCAGCAAGGATCTTTTATATTTGGAGCGGAAAGATTTATCCTCTTCGTCTTTAGAATCCTCACTGCTAGTTTGTAAAAAAAACTCAACGTCCAAGGAGCCTACTCGGAATGAAAAACCCATTACAGAATCAGCTTCAAAAAGCTTAGTATTGGGAAGAGTCAAAGACTTCTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCAAAGGAAAATGCTGAAAAATATGATATCGAAGCCTTAGATGGCAATGAATCAGAAGTGATTCAATTGGACCTGATGTTGGGTATTGCTGATCTTCATACTCCTGAAGCTGTGACTGCTGCTGAATCTGCAATAATTGGAAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATCATGATAACGATGACAATGAAAAGAGCGATGATCAGAAGACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCAAATTCTAGAAAAACAAGCTGTAGAAGTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAAGATCCATCTTTTTTATCGGACCTGTTGCGTCAATATGGATGCATTGTGGTTTGAAAGTTTTATTCACGGTGGAGGGTATATGAAGTTTCTGAAGCTTGTTCTGACAAAATCTCCAAGGTTGCGATTGCTAGCCTAAACCTTTGAAGCTTGGGCGGTGTGAACTGATCTTTGCTCGGCCTTGGGATTTTTAGATATTTCTCTTGTCAACTTTATCACAATTTCAAGTGCAGGAAAGGTGCCGTTTCTATGCATTTCTATTAGGAAATGTAATAGATTTTAAGTTGTAACTAGTGTTGGTCAGTTTCACAATTTTGGTTTGTATTGATGATGTCGAATTTCGATGTTTTAAAAATGGCCCTTTTATATATATGTACGTTGTAGCTTCAAATAAGTTAAATAGTTTAGAAGAAGGTTTTTTGAATGGTAAGAAG

Coding sequence (CDS)

ATGCGGCATCCCAGCAAGGATCTTTTATATTTGGAGCGGAAAGATTTATCCTCTTCGTCTTTAGAATCCTCACTGCTAGTTTGTAAAAAAAACTCAACGTCCAAGGAGCCTACTCGGAATGAAAAACCCATTACAGAATCAGCTTCAAAAAGCTTAGTATTGGGAAGAGTCAAAGACTTCTTGGGAGTAATATCAGAAGCTAATAAAAAGCTGCAAATGGATTCAAAGGAAAATGCTGAAAAATATGATATCGAAGCCTTAGATGGCAATGAATCAGAAGTGATTCAATTGGACCTGATGTTGGGTATTGCTGATCTTCATACTCCTGAAGCTGTGACTGCTGCTGAATCTGCAATAATTGGAAATCACCCTGTAATTCCATTGACTTGTAGTAGTAGCGAGTCAGAGTCTGAAGAGAGTAGTGATGATAGTATTACCAGTGATCATGATAACGATGACAATGAAAAGAGCGATGATCAGAAGACTGACTGCAGTAACAGATTGTCAGTTAAACTCAAAAGATCAAATTCTAGAAAAACAAGCTGTAGAAGTAAAAGCAAAGGAAAAGGTAAATCAAAGAAGCGACCAAAGATTCAAGTGCTCTCTTAA

Protein sequence

MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKTSCRSKSKGKGKSKKRPKIQVLS*
Homology
[Close]
BLAST of CSPI03G02230 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.7e-96
Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSK+PTRNEKPITE ASKSLVLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]
BLAST of CSPI03G02230 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 191/202 (94.55%), Postives = 196/202 (97.03%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNEKPITE ASKSLVLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK 
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]
BLAST of CSPI03G02230 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 191/202 (94.55%), Postives = 196/202 (97.03%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNEKPITE ASKSLVLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK 
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]
BLAST of CSPI03G02230 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.8e-73
Identity = 167/206 (81.07%), Postives = 182/206 (88.35%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLL LERKDL SSSLESSLLVCKKNSTSKEP RNEKPITE A KS VLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGV+SEANKKLQ+D+K++AEKYDIEAL+GNESEVI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180
           GN PVIPL C    SSSESESEESSDDSITSD++++DNEKSD Q TD  NRLSVKLKRS 
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 203
           SR+ +CRS+S+ KGKS KRPKI  LS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]
BLAST of CSPI03G02230 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.4e-73
Identity = 167/205 (81.46%), Postives = 181/205 (88.29%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLL LERKDL SSS ESSLLVCKKNSTSKEP RNEKPITE A KS VLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSFESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGV+SEANKKLQ+D+K++AEKYDIEAL+G+ESEVI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSS---ESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNS 180
           GN PVI L CSSS   ESESEESSDDSITSD+++DDNEKSD+Q TD  NRLSVKLKR  S
Sbjct: 121 GNQPVIALNCSSSSSGESESEESSDDSITSDNNDDDNEKSDNQNTDRGNRLSVKLKRLKS 180

Query: 181 RKTSCRSKSKGKGKSKKRPKIQVLS 203
           RKT+CRS+SK KGKS KRPKI  LS
Sbjct: 181 RKTNCRSESKEKGKSNKRPKILELS 205

[Close]
BLAST of CSPI03G02230 vs. NCBI nr
Match: XP_004147238.2 (uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSK+PTRNEKPITE ASKSLVLGRVKDF
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII
Sbjct: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]
BLAST of CSPI03G02230 vs. NCBI nr
Match: XP_011650372.1 (uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus] >KGN55834.2 hypothetical protein Csa_010190 [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 8.7e-94
Identity = 200/206 (97.09%), Postives = 201/206 (97.57%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSL----ESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGR 60
           MRHPSKDLLYLERKDLSSSSL    ESSLLVCKKNSTSK+PTRNEKPITE ASKSLVLGR
Sbjct: 1   MRHPSKDLLYLERKDLSSSSLGVFNESSLLVCKKNSTSKDPTRNEKPITEPASKSLVLGR 60

Query: 61  VKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAE 120
           VKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAE
Sbjct: 61  VKDFLGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAE 120

Query: 121 SAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180
           SAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN
Sbjct: 121 SAIIGNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180

Query: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 203
           SRKTSCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 206

[Close]
BLAST of CSPI03G02230 vs. NCBI nr
Match: XP_008448773.1 (PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa] >TYK12053.1 E3 ubiquitin-protein ligase RNF34 [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 3.4e-90
Identity = 191/202 (94.55%), Postives = 196/202 (97.03%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLL+LERKDLS+SSLESSLLVCKKNSTSKEP RNEKPITE ASKSLVLGRV+DF
Sbjct: 1   MRHASKDLLHLERKDLSTSSLESSLLVCKKNSTSKEPCRNEKPITEPASKSLVLGRVQDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGVISEANKKLQMDSKENA+KYDIEALDGNESEVIQLDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDSKENADKYDIEALDGNESEVIQLDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRKT 180
           GNHPVIPLTCSSSESESEESSDDSITSDHDN+DNEKSDDQ TDCSNRLSVKLKRSNSRK 
Sbjct: 121 GNHPVIPLTCSSSESESEESSDDSITSDHDNNDNEKSDDQNTDCSNRLSVKLKRSNSRKA 180

Query: 181 SCRSKSKGKGKSKKRPKIQVLS 203
           SCRSKSKGKGKSKKRPKIQVLS
Sbjct: 181 SCRSKSKGKGKSKKRPKIQVLS 202

[Close]
BLAST of CSPI03G02230 vs. NCBI nr
Match: XP_038903017.1 (uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 uncharacterized protein LOC120089721 [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 6.5e-81
Identity = 183/203 (90.15%), Postives = 190/203 (93.60%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEP RNEKPITE ASKSLVLGRVKDF
Sbjct: 1   MRH-SKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPRRNEKPITEPASKSLVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGVISEANKKLQMD+K+NAEKYDIEALDGNES+VI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVISEANKKLQMDAKDNAEKYDIEALDGNESKVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTC-SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSNSRK 180
           GN PVIPLTC SSSESESEESSDDSITS+ +NDDNEKSDDQ TD SNR SVKLKRSNSRK
Sbjct: 121 GNQPVIPLTCSSSSESESEESSDDSITSNDNNDDNEKSDDQNTDHSNRSSVKLKRSNSRK 180

Query: 181 TSCRSKSKGKGKSKKRPKIQVLS 203
           TSCRSKSKGK KS+KRPKI  LS
Sbjct: 181 TSCRSKSKGKSKSEKRPKILELS 202

[Close]
BLAST of CSPI03G02230 vs. NCBI nr
Match: XP_023005549.1 (uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 3.8e-73
Identity = 167/206 (81.07%), Postives = 182/206 (88.35%), Query Frame = 0 

Query: 1   MRHPSKDLLYLERKDLSSSSLESSLLVCKKNSTSKEPTRNEKPITESASKSLVLGRVKDF 60
           MRH SKDLL LERKDL SSSLESSLLVCKKNSTSKEP RNEKPITE A KS VLGRVKDF
Sbjct: 1   MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDF 60

Query: 61  LGVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAII 120
           LGV+SEANKKLQ+D+K++AEKYDIEAL+GNESEVI+LDLMLGIADLHTPEAV AAESAII
Sbjct: 61  LGVLSEANKKLQLDAKDDAEKYDIEALNGNESEVIELDLMLGIADLHTPEAVAAAESAII 120

Query: 121 GNHPVIPLTC----SSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLSVKLKRSN 180
           GN PVIPL C    SSSESESEESSDDSITSD++++DNEKSD Q TD  NRLSVKLKRS 
Sbjct: 121 GNQPVIPLNCSSSSSSSESESEESSDDSITSDNNDNDNEKSDTQNTDRGNRLSVKLKRSK 180

Query: 181 SRKTSCRSKSKGKGKSKKRPKIQVLS 203
           SR+ +CRS+S+ KGKS KRPKI  LS
Sbjct: 181 SRRANCRSESREKGKSNKRPKILELS 206

[Close]
BLAST of CSPI03G02230 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 77/168 (45.83%), Postives = 105/168 (62.50%), Query Frame = 0 

Query: 6   KDLLYLERKDLSSSS-LESSLLVC---KKNSTSKEPTRNEKPITESASKSLVLGRVKDFL 65
           KDLL LE K+ SSSS ++S+LL+C    K     E     KP      KS +LG++K FL
Sbjct: 8   KDLLKLELKNPSSSSAMDSALLMCTDKNKKKKKMEAPPPSKPTIAPVPKSQLLGKLKGFL 67

Query: 66  GVISEANKKLQMDSKENAEKYDIEALDGNESEVIQLDLMLGIADLHTPEAVTAAESAIIG 125
           GV++EANKK    S+ N E Y+IEAL GNESE+I++DLMLG+ADL+TPEAV+AAE+AI G
Sbjct: 68  GVMAEANKK----SEANPEAYNIEALTGNESELIEMDLMLGVADLNTPEAVSAAEAAIAG 127

Query: 126 NHPVIPLTCSSSESESEESSDDSITSDHDNDDNEKSDDQKTDCSNRLS 170
             P          +ES +SS D    D  + ++E  + +  +CS + S
Sbjct: 128 IGPA---------AESGDSSSD----DESDSESEGEESKSAECSRKRS 158

The following BLAST results are available for this feature:
BLAST of CSPI03G02230 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G02230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4487.7e-9699.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1[more]
A0A5D3CJH51.7e-9094.55E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BJW41.7e-9094.55uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=... [more]
A0A6J1KZJ81.8e-7381.07uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1F9135.4e-7381.46uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of CSPI03G02230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147238.21.6e-9599.01uncharacterized protein LOC101206707 isoform X2 [Cucumis sativus][more]
XP_011650372.18.7e-9497.09uncharacterized protein LOC101206707 isoform X1 [Cucumis sativus] >KGN55834.2 hy... [more]
XP_008448773.13.4e-9094.55PREDICTED: uncharacterized protein LOC103490838 [Cucumis melo] >KAA0041045.1 E3 ... [more]
XP_038903017.16.5e-8190.15uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 unchara... [more]
XP_023005549.13.8e-7381.07uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima][more]
BLAST of CSPI03G02230 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71430.11.2e-2145.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027921NOP protein chaperone 1PFAMPF15370DUF4598coord: 54..199
e-value: 7.0E-15
score: 55.5
IPR027921NOP protein chaperone 1PANTHERPTHR28674SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSEDcoord: 2..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G02230.1CSPI03G02230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000492 box C/D snoRNP assembly
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0062064 box C/D snoRNP complex binding