CSPI02G23610 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGTCCAACCCACACGCCCCCTCTATCTCTATCCTCATCCACTCTCATTTTCCCATCCCTTTTCCCACACTCAAACTATTCTCTTTCTCTCTTTTCTATAAATGCCCATATTTCTTTTCCTATATATATACCCACTCTCTCCATTCTCCCTCTTTATTCCCTTTAAAACCTTCTCTCTTTTCTCTTTTAAAATCCCTATCCAAAATGGAGCTACAACTTGGCCTTTCTCTTCCCCTTCACAGCCACCCCAATATTCATTGCAAGCCAGCTGGTGGCCGTTTTGGAGATCATTCATTCATTCTTGAAAATGAGCTTCCTCAAACTTTGCCTTTGCTTTCTTGGAATGATAAGCCCAAGGATGAAGATGACCCACACCACCCTAGAGGAACACATTTTTGCAACATTCAAAAGTGAGTCCAAACTTATGTATATAAAAGATTTAACCATCTTCTCTTAATCTCTATTTAATAATTTACGTGTCACTTAGTTATGCTTGTATTGACAGGCTCACTTGTTACATTGTTGGAACTTAACTAATTCCATGTTGATCTAATAATGATTTTAATTATGTCACAATTTCGTATAGGAAAGATGAAGAGAAGAAGCAGGCAGTAGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCTTCGATTGGCACACTCAACCTCCGCAAACCATAGAGAATCGTCGTCCTGCAGTAGCAGATCAAAGTAACCAAAATGGTGGACGAAATTCATTGTTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGATTTAAAGCTCTACCACTCTCATCACTCTCTCAAAACTGCTCTCCTCACCATGTTCACCACAAGTAATTCTGAATTTCCTTACACATTTAGTGCTACTAATTAAATATACAACAAACCTTTTACAGATATAGCAAAAATATATGAACTAGACTCCCTATGAACACACACCATGACAATTTTGTTATATCTATAAGTTCTTTCACACATATCATTGAGTTATAATATCCGCTGATGTAACATAACAGATAAGGGAATGGATAACAGCGATTGGGATTTTACGCTGATCTATGAAGACGAAGATGGTGATTGGATGCTTGCAGAAGATCTTCCATGGAAGTTAGTTCTCAACTTTCTTTTTCTTTTTCTTTTTTCCCAGCTTCATGATGTTTTATTTATAATGTATTAAATTTTTTTGGCAGTTCCTTCGTCGAGTCTGCACAGCGCCTCAAGATTCTGGTTGGCAACAGAAACAAAGGATGAAGTCCGCATATATTATTATTATTTCCGAATCTTAATATTCCACATGTATGTAATCATATATATTATATTCTGAAATGGCATAATGTGTTTGCTACTTCTATATTACAAGCAATTATTAATATTTTCCATTGCTGCTAAAGTGTGGACCTACGTGGTCGAAATTTTTCTATTAAAAAAAATTATTTGGCAC GAGGTCCAACCCACACGCCCCCTCTATCTCTATCCTCATCCACTCTCATTTTCCCATCCCTTTTCCCACACTCAAACTATTCTCTTTCTCTCTTTTCTATAAATGCCCATATTTCTTTTCCTATATATATACCCACTCTCTCCATTCTCCCTCTTTATTCCCTTTAAAACCTTCTCTCTTTTCTCTTTTAAAATCCCTATCCAAAATGGAGCTACAACTTGGCCTTTCTCTTCCCCTTCACAGCCACCCCAATATTCATTGCAAGCCAGCTGGTGGCCGTTTTGGAGATCATTCATTCATTCTTGAAAATGAGCTTCCTCAAACTTTGCCTTTGCTTTCTTGGAATGATAAGCCCAAGGATGAAGATGACCCACACCACCCTAGAGGAACACATTTTTGCAACATTCAAAAGAAAGATGAAGAGAAGAAGCAGGCAGTAGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCTTCGATTGGCACACTCAACCTCCGCAAACCATAGAGAATCGTCGTCCTGCAGTAGCAGATCAAAGTAACCAAAATGGTGGACGAAATTCATTGTTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGATTTAAAGCTCTACCACTCTCATCACTCTCTCAAAACTGCTCTCCTCACCATGTTCACCACAAATAAGGGAATGGATAACAGCGATTGGGATTTTACGCTGATCTATGAAGACGAAGATGGTGATTGGATGCTTGCAGAAGATCTTCCATGGAATTCCTTCGTCGAGTCTGCACAGCGCCTCAAGATTCTGGTTGGCAACAGAAACAAAGGATGAAGTCCGCATATATTATTATTATTTCCGAATCTTAATATTCCACATGTATGTAATCATATATATTATATTCTGAAATGGCATAATGTGTTTGCTACTTCTATATTACAAGCAATTATTAATATTTTCCATTGCTGCTAAAGTGTGGACCTACGTGGTCGAAATTTTTCTATTAAAAAAAATTATTTGGCAC ATGGAGCTACAACTTGGCCTTTCTCTTCCCCTTCACAGCCACCCCAATATTCATTGCAAGCCAGCTGGTGGCCGTTTTGGAGATCATTCATTCATTCTTGAAAATGAGCTTCCTCAAACTTTGCCTTTGCTTTCTTGGAATGATAAGCCCAAGGATGAAGATGACCCACACCACCCTAGAGGAACACATTTTTGCAACATTCAAAAGAAAGATGAAGAGAAGAAGCAGGCAGTAGGATGGCCACCCATTGAGTCATGGAGGAAGAAGGCCTTCGATTGGCACACTCAACCTCCGCAAACCATAGAGAATCGTCGTCCTGCAGTAGCAGATCAAAGTAACCAAAATGGTGGACGAAATTCATTGTTCGTGAAAGTGAAAATGGAAGGGGTAGCAATAGCAAGGAAACTCGATTTAAAGCTCTACCACTCTCATCACTCTCTCAAAACTGCTCTCCTCACCATGTTCACCACAAATAAGGGAATGGATAACAGCGATTGGGATTTTACGCTGATCTATGAAGACGAAGATGGTGATTGGATGCTTGCAGAAGATCTTCCATGGAATTCCTTCGTCGAGTCTGCACAGCGCCTCAAGATTCTGGTTGGCAACAGAAACAAAGGATGA MELQLGLSLPLHSHPNIHCKPAGGRFGDHSFILENELPQTLPLLSWNDKPKDEDDPHHPRGTHFCNIQKKDEEKKQAVGWPPIESWRKKAFDWHTQPPQTIENRRPAVADQSNQNGGRNSLFVKVKMEGVAIARKLDLKLYHSHHSLKTALLTMFTTNKGMDNSDWDFTLIYEDEDGDWMLAEDLPWNSFVESAQRLKILVGNRNKG* Homology
BLAST of CSPI02G23610 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 7.7e-24 Identity = 77/242 (31.82%), Postives = 116/242 (47.93%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy Swiss-Prot
Match: A2XLV9 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21 Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy Swiss-Prot
Match: Q10D34 (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA13 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21 Identity = 59/151 (39.07%), Postives = 87/151 (57.62%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy Swiss-Prot
Match: Q75GB1 (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20 Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 6.8e-20 Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy TrEMBL
Match: A0A0A0LPM6 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G381840 PE=3 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.6e-120 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy TrEMBL
Match: A0A5A7VD13 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002350 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.0e-108 Identity = 188/207 (90.82%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy TrEMBL
Match: A0A1S3BCX7 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488319 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.0e-108 Identity = 188/207 (90.82%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy TrEMBL
Match: A0A6J1HG86 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111462707 PE=3 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73 Identity = 144/208 (69.23%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of CSPI02G23610 vs. ExPASy TrEMBL
Match: A0A6J1K2I8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111491815 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 9.1e-60 Identity = 119/165 (72.12%), Postives = 134/165 (81.21%), Query Frame = 0
BLAST of CSPI02G23610 vs. NCBI nr
Match: XP_004138851.1 (auxin-responsive protein IAA29 [Cucumis sativus] >KGN62959.1 hypothetical protein Csa_022378 [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 3.2e-120 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CSPI02G23610 vs. NCBI nr
Match: XP_008445232.2 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo] >KAA0064917.1 auxin-responsive protein IAA29-like [Cucumis melo var. makuwa]) HSP 1 Score: 400.6 bits (1028), Expect = 8.3e-108 Identity = 188/207 (90.82%), Postives = 196/207 (94.69%), Query Frame = 0
BLAST of CSPI02G23610 vs. NCBI nr
Match: XP_038886196.1 (auxin-responsive protein IAA29-like [Benincasa hispida]) HSP 1 Score: 340.9 bits (873), Expect = 7.8e-90 Identity = 165/207 (79.71%), Postives = 179/207 (86.47%), Query Frame = 0
BLAST of CSPI02G23610 vs. NCBI nr
Match: XP_022962174.1 (auxin-responsive protein IAA29-like [Cucurbita moschata]) HSP 1 Score: 285.8 bits (730), Expect = 3.0e-73 Identity = 144/208 (69.23%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of CSPI02G23610 vs. NCBI nr
Match: KAG6598565.1 (Auxin-induced protein AUX28, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 282.7 bits (722), Expect = 2.5e-72 Identity = 143/208 (68.75%), Postives = 161/208 (77.40%), Query Frame = 0
BLAST of CSPI02G23610 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 ) HSP 1 Score: 112.1 bits (279), Expect = 5.5e-25 Identity = 77/242 (31.82%), Postives = 116/242 (47.93%), Query Frame = 0
BLAST of CSPI02G23610 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 ) HSP 1 Score: 99.0 bits (245), Expect = 4.8e-21 Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 0
BLAST of CSPI02G23610 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19 Identity = 52/153 (33.99%), Postives = 77/153 (50.33%), Query Frame = 0
BLAST of CSPI02G23610 vs. TAIR 10
Match: AT5G65670.1 (indole-3-acetic acid inducible 9 ) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18 Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 0
BLAST of CSPI02G23610 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 ) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18 Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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