Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCACCAAAAAATAGCAAAGTAACTTAGCAAAAACACTTGGCATTTCCAACTTAGCTTTGTTAACCCAAAAATGACTTACCCTAAAACCCTTATCGGTTTCGGTCTCCTCCTCGCTCTTCTTTTCATCTCCTCACAGGTCTCTGCTCGTCTACTCGGTTAGTTTGCTTATACCAAACTCGCTCATAAATTTGTTGATAGTGTATTAAAAAGATTAAATATGTTTTTGTGTATTCATTTTTTTGTGAATGGTTGTAACTTTTGCAGGATACTAATGTACAAATTTATGAAAAGACAAAAAAAGTGTTTAATTTATCACCGTTATAAAATAGTTGAGTATGTCATTGCATTTAATTTCATGTGAATATTCGACTCACATGAATTGAAAAATGTATTTATAGATAGCATAATGTTATTTTGTCTATCGTAATCTATTGCTCGGTGATATAAGTCTTTTGTGATCTATCGTTGATAGATAATGACATTTTGGTATATTTAAAAATGTTTTCATCAGTTTTACTACTTTAAAAAATTATCGGCCAACATTATATTGATTTTTTTAAAAAATAATAATTATGGTAGAGGAAGACAAAGTTAAGTCCGATGGCTTAGATTATCACGGAGGACGCTACGGCGGAGGACACTACGGCGGAGGTCACTACGGCGGAGGAGGTCACTATGGTGGGGGTCACTATGGCGGAGGAGGTCACTATGGCGGAGGTCACTACGGTGGAGGTCACTATGGTGGAGGAGGTCACTACGGCGGGGGACACTATGGTGGAGGACATGGCCTTGATGCTAACACCAAAGAGTCAAATGACCAAGGTCTAGATAAACATGGCGGAGGACACGGTGGACACCATGGTGGAGGACACGGTGGACACCACGGTGGAGGACATCATGGCCTTGATGCTGACGTGAAAAACTTGGACAGTCATGGCGGTGGCCACCACCACGACCACGGCCACCACCACTGCCACCACCCCCACTGCCCCGAGAGTGTTAAGAATTAGAACACTAAAACCTACTCCCCATCTGCAACCATGTTTGGTTCAAAATAAAAGCATCGTTGAAATAAAGTTTGT
Coding sequence (CDS)
ATGACTTACCCTAAAACCCTTATCGGTTTCGGTCTCCTCCTCGCTCTTCTTTTCATCTCCTCACAGGTCTCTGCTCGTCTACTCGAGGAAGACAAAGTTAAGTCCGATGGCTTAGATTATCACGGAGGACGCTACGGCGGAGGACACTACGGCGGAGGTCACTACGGCGGAGGAGGTCACTATGGTGGGGGTCACTACGGTGGAGGTCACTATGGTGGAGGAGGTCACTACGGCGGGGGACACTATGGTGGAGGACATGGCCTTGATGCTAACACCAAAGAGTCAAATGACCAAGGTCTAGATAAACATGGCGGAGGACACGGTGGACACCATGGTGGAGGACACGGTGGACACCACGGTGGAGGACATCATGGCCTTGATGCTGACGTGAAAAACTTGGACAGTCATGGCGGTGGCCACCACCACGACCACGGCCACCACCACTGCCACCACCCCCACTGCCCCGAGAGTGTTAAGAATTAG
Protein sequence
MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYHGGRYGGGHYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGGHGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN
Homology
BLAST of Cucsat.G9057 vs. NCBI nr
Match:
XP_011654035.2 (cold and drought-regulated protein CORA [Cucumis sativus] >KAE8649821.1 hypothetical protein Csa_012804 [Cucumis sativus])
HSP 1 Score: 286 bits (731), Expect = 1.81e-96
Identity = 159/172 (92.44%), Postives = 159/172 (92.44%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYHGGRYGGG------------ 60
MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDY GGRYGGG
Sbjct: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYPGGRYGGGGHYGGGHYGGGG 60
Query: 61 HYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHG 120
HYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHG
Sbjct: 61 HYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHG 120
Query: 121 GHHGGGHGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN 160
GHHGGGHGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN
Sbjct: 121 GHHGGGHGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN 172
BLAST of Cucsat.G9057 vs. NCBI nr
Match:
XP_008463760.1 (PREDICTED: cold and drought-regulated protein CORA-like [Cucumis melo] >KAA0066755.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa] >TYK27902.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa])
HSP 1 Score: 184 bits (467), Expect = 9.17e-57
Identity = 124/166 (74.70%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYHGGRYGGG-HYGGG-HYGGG 60
MTYPKTLIG GLLLALLFISSQVSARLLEEDKVK+DGLDYHGG YGGG HYGGG HYGGG
Sbjct: 1 MTYPKTLIGLGLLLALLFISSQVSARLLEEDKVKADGLDYHGGHYGGGGHYGGGGHYGGG 60
Query: 61 GHYGGG-HYGGG-HYGGG--GHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGG 120
GHYGGG HYGGG HYGGG GHYGGGHYGGGHGLDA+TK+ NDQGLD H GGHHGGG
Sbjct: 61 GHYGGGGHYGGGGHYGGGHGGHYGGGHYGGGHGLDADTKKLNDQGLDSH----GGHHGGG 120
Query: 121 HGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN 160
HG HGGGHHH CHHPHCPESVKN
Sbjct: 121 HG-------------------HGGGHHH------CHHPHCPESVKN 137
BLAST of Cucsat.G9057 vs. NCBI nr
Match:
XP_038900076.1 (histidine-rich glycoprotein-like [Benincasa hispida])
HSP 1 Score: 82.0 bits (201), Expect = 1.50e-16
Identity = 79/170 (46.47%), Postives = 93/170 (54.71%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDK--VKSDGLDYHGGRYGGGHYGGGHYGGG 60
M Y KTL+ GLLLALLF+SS VSARLLEEDK V+SD +H H+ GH+
Sbjct: 1 MAYSKTLLVLGLLLALLFVSSHVSARLLEEDKGGVESDHHGHH-------HHDHGHH--- 60
Query: 61 GHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGGHGGH 120
H+ GH+ HG + ++N GLD GH GHHGGGHG H
Sbjct: 61 -----------------HHDHGHHDHDHGHHGHDHDANVDGLD----GHHGHHGGGHG-H 120
Query: 121 HGGGHHGLDADVKNLDSHGGGHHHDH-------GHHHCHHPHCP-ESVKN 160
HGG HHG DA+V +LD H HHHDH GH H HH H +SVKN
Sbjct: 121 HGG-HHGHDANVNDLDGH---HHHDHDHGHHDHGHDHGHHGHDQTQSVKN 134
BLAST of Cucsat.G9057 vs. NCBI nr
Match:
KAG6591765.1 (hypothetical protein SDJN03_14111, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 76.3 bits (186), Expect = 2.65e-14
Identity = 73/157 (46.50%), Postives = 79/157 (50.32%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDK--VKSDGLDYHG-GRYGGGHYGGGHYGG 60
M Y KT + GLLLALLFISS VSAR LEE K V+SDG +H G + GH+ GH
Sbjct: 1 MAYSKTFLLLGLLLALLFISSHVSARFLEEKKSDVESDGHGHHDHGHHDHGHHDHGH--- 60
Query: 61 GGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGGHGG 120
HG DAN GLD GH GHHGGGHGG
Sbjct: 61 ----------------------------HGHDANVD-----GLD----GHHGHHGGGHGG 112
Query: 121 HHGGGHHGLDADVKNLDSHGGGH-HHDHGHHHCHHPH 153
HHG DADV +LD H G H HHDH HH HH H
Sbjct: 121 HHG-----HDADVDDLDGHHGHHDHHDHHDHHDHHDH 112
BLAST of Cucsat.G9057 vs. NCBI nr
Match:
KAG7024647.1 (hypothetical protein SDJN02_13465, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 75.9 bits (185), Expect = 3.74e-14
Identity = 72/157 (45.86%), Postives = 79/157 (50.32%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDK--VKSDGLDYHG-GRYGGGHYGGGHYGG 60
M Y KT + GLLLALLF+SS VSAR LEE K V+SDG +H G + GH+ GH
Sbjct: 1 MAYSKTFLLLGLLLALLFVSSHVSARFLEEKKSDVESDGHGHHDHGHHDHGHHDHGH--- 60
Query: 61 GGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGGHGG 120
HG DAN GLD GH GHHGGGHGG
Sbjct: 61 ----------------------------HGHDANVD-----GLD----GHHGHHGGGHGG 112
Query: 121 HHGGGHHGLDADVKNLDSHGGGH-HHDHGHHHCHHPH 153
HHG DADV +LD H G H HHDH HH HH H
Sbjct: 121 HHG-----HDADVDDLDGHHGHHDHHDHHDHHDHHDH 112
BLAST of Cucsat.G9057 vs. ExPASy TrEMBL
Match:
A0A0A0L4K0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625060 PE=4 SV=1)
HSP 1 Score: 239 bits (610), Expect = 2.56e-78
Identity = 138/151 (91.39%), Postives = 138/151 (91.39%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYHGGRYGGG------------ 60
MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDY GGRYGGG
Sbjct: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYPGGRYGGGGHYGGGHYGGGG 60
Query: 61 HYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHG 120
HYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHG
Sbjct: 61 HYGGGHYGGGGHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHG 120
Query: 121 GHHGGGHGGHHGGGHHGLDADVKNLDSHGGG 139
GHHGGGHGGHHGGGHHGLDADVKNLDSHGGG
Sbjct: 121 GHHGGGHGGHHGGGHHGLDADVKNLDSHGGG 151
BLAST of Cucsat.G9057 vs. ExPASy TrEMBL
Match:
A0A5D3DWK2 (Cold and drought-regulated protein CORA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00870 PE=4 SV=1)
HSP 1 Score: 184 bits (467), Expect = 4.44e-57
Identity = 124/166 (74.70%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYHGGRYGGG-HYGGG-HYGGG 60
MTYPKTLIG GLLLALLFISSQVSARLLEEDKVK+DGLDYHGG YGGG HYGGG HYGGG
Sbjct: 1 MTYPKTLIGLGLLLALLFISSQVSARLLEEDKVKADGLDYHGGHYGGGGHYGGGGHYGGG 60
Query: 61 GHYGGG-HYGGG-HYGGG--GHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGG 120
GHYGGG HYGGG HYGGG GHYGGGHYGGGHGLDA+TK+ NDQGLD H GGHHGGG
Sbjct: 61 GHYGGGGHYGGGGHYGGGHGGHYGGGHYGGGHGLDADTKKLNDQGLDSH----GGHHGGG 120
Query: 121 HGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN 160
HG HGGGHHH CHHPHCPESVKN
Sbjct: 121 HG-------------------HGGGHHH------CHHPHCPESVKN 137
BLAST of Cucsat.G9057 vs. ExPASy TrEMBL
Match:
A0A1S3CJZ6 (cold and drought-regulated protein CORA-like OS=Cucumis melo OX=3656 GN=LOC103501826 PE=4 SV=1)
HSP 1 Score: 184 bits (467), Expect = 4.44e-57
Identity = 124/166 (74.70%), Postives = 127/166 (76.51%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDKVKSDGLDYHGGRYGGG-HYGGG-HYGGG 60
MTYPKTLIG GLLLALLFISSQVSARLLEEDKVK+DGLDYHGG YGGG HYGGG HYGGG
Sbjct: 1 MTYPKTLIGLGLLLALLFISSQVSARLLEEDKVKADGLDYHGGHYGGGGHYGGGGHYGGG 60
Query: 61 GHYGGG-HYGGG-HYGGG--GHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGG 120
GHYGGG HYGGG HYGGG GHYGGGHYGGGHGLDA+TK+ NDQGLD H GGHHGGG
Sbjct: 61 GHYGGGGHYGGGGHYGGGHGGHYGGGHYGGGHGLDADTKKLNDQGLDSH----GGHHGGG 120
Query: 121 HGGHHGGGHHGLDADVKNLDSHGGGHHHDHGHHHCHHPHCPESVKN 160
HG HGGGHHH CHHPHCPESVKN
Sbjct: 121 HG-------------------HGGGHHH------CHHPHCPESVKN 137
BLAST of Cucsat.G9057 vs. ExPASy TrEMBL
Match:
A0A6J1IKT3 (histidine-rich glycoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111476525 PE=4 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 8.55e-13
Identity = 71/156 (45.51%), Postives = 77/156 (49.36%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDK--VKSDGLDYHGGRYGGGHYGGGHYGGG 60
M Y KT + GLLLALLF+SS VSAR LEE K V+SD +H
Sbjct: 1 MAYSKTFLLLGLLLALLFVSSHVSARFLEEKKSDVESDSHGHHD---------------- 60
Query: 61 GHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGGHGGH 120
H GH+ GH HG DAN GLD GH GHHGGGHGGH
Sbjct: 61 -----------H----GHHDHGH----HGHDANVD-----GLD----GHHGHHGGGHGGH 107
Query: 121 HGGGHHGLDADVKNLDSHGGGH-HHDHGHHHCHHPH 153
HG DADV +LD H G H HHDH HH HH H
Sbjct: 121 HG-----HDADVDDLDGHHGHHDHHDHHDHHDHHDH 107
BLAST of Cucsat.G9057 vs. ExPASy TrEMBL
Match:
A0A6J1F6Z7 (histidine-rich glycoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111442725 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 1.19e-12
Identity = 71/156 (45.51%), Postives = 77/156 (49.36%), Query Frame = 0
Query: 1 MTYPKTLIGFGLLLALLFISSQVSARLLEEDK--VKSDGLDYHGGRYGGGHYGGGHYGGG 60
M Y KT + GLLLALLFISS VSAR LEE K V+SDG +H
Sbjct: 1 MAYSKTFLLLGLLLALLFISSHVSARFLEEKKSDVESDGHGHHD---------------- 60
Query: 61 GHYGGGHYGGGHYGGGGHYGGGHYGGGHGLDANTKESNDQGLDKHGGGHGGHHGGGHGGH 120
H GH+ GH HG DAN GLD GH HHGGGHGGH
Sbjct: 61 -----------H----GHHDHGH----HGHDANVD-----GLD----GHHEHHGGGHGGH 107
Query: 121 HGGGHHGLDADVKNLDSHGGGH-HHDHGHHHCHHPH 153
HG DAD+ +LD H G H HHDH HH HH H
Sbjct: 121 HG-----HDADIDDLDGHHGHHDHHDHHDHHDHHDH 107
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_011654035.2 | 1.81e-96 | 92.44 | cold and drought-regulated protein CORA [Cucumis sativus] >KAE8649821.1 hypothet... | [more] |
XP_008463760.1 | 9.17e-57 | 74.70 | PREDICTED: cold and drought-regulated protein CORA-like [Cucumis melo] >KAA00667... | [more] |
XP_038900076.1 | 1.50e-16 | 46.47 | histidine-rich glycoprotein-like [Benincasa hispida] | [more] |
KAG6591765.1 | 2.65e-14 | 46.50 | hypothetical protein SDJN03_14111, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7024647.1 | 3.74e-14 | 45.86 | hypothetical protein SDJN02_13465, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L4K0 | 2.56e-78 | 91.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625060 PE=4 SV=1 | [more] |
A0A5D3DWK2 | 4.44e-57 | 74.70 | Cold and drought-regulated protein CORA-like OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A1S3CJZ6 | 4.44e-57 | 74.70 | cold and drought-regulated protein CORA-like OS=Cucumis melo OX=3656 GN=LOC10350... | [more] |
A0A6J1IKT3 | 8.55e-13 | 45.51 | histidine-rich glycoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111476525 PE=... | [more] |
A0A6J1F6Z7 | 1.19e-12 | 45.51 | histidine-rich glycoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111442725 P... | [more] |