Cucsat.G5933 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACCCAAACCCAAAAAGAATCAGATTCCATTATTATTCAATATTTATTATATAAAATCCAAACAAAAATGCTCCAACTTTTCCCATTCAAGCAAAATCATCATCCCCCACCAAATTAATTCATTTTTCATCCCCAATTCATGTCTGAGCTCAAGGCAAGCAATAAAACCCCAACACTACTCTCTTTTTTTTGGCAGAAAATTATAATTTTGTTTGGCTTTTTGATAATTGACAAATGTGTTTTGCAGCAATTTTGTATGGTGATGAAAATCAATGTTGACTGCAATGCTTGTTGTAGGAAGCTTAGGAGGATTGTGTTGAAAATGAAAGGTAAGGTTTCTACTTCATTCACAAATGAAATTAATCAAATGTCTTGTTTATTAGTTCACTTAATGATAAAATTTTATCTCCACTGTTTTCTTTCAATAATTTTAAAAAAATATAAGTTGTTACATATATTTAACTTTTTTAATCATTAATTTTTGAAAATGAAGCATATTTATCCTTAATTTCTTACCATCCTTTCATTCCAAAAGAGTTAATTTTCAGCCATATTCAAAACACAAAAACAATTTTTTTTTTTTTGTTTTAAATTTGAACTTTGGTTTTTTAGTTTTTTGTTTTTTTAGATTTCGGCAAAAGTTAAATAATTGAAGGATTGTTTTCTATGCTTAATTTTAAAAAACTAAAAATCAAAAATCAAATGTGCCAATGAGGATTCAAAATTAAAAATTAATTAAAATTAAAATTGTACTATCTTAGCTATAAATTATATTAATCATGAAAGTTTGAGATCCAATTTCATTATTTTTTGATTGAATTTTTGTAACTATTGTAAATTTGGAGGACCCAATTTTAATAGGGTGAACCCATCCCATAAAAATGGGTGTAACAATTTCATGTTTAATTTTTAATTTGTTAAAAAACTATACTTATATTCCCCCAAGTTGAGATTAGAAGTTTGGTTATTAATTTGAATATCAAAATAGTAACGAAGATGGATTGTTATTGTGAATTTGGACGAGGAAGCAATCGAGACGTATATGATAGAGAGGGAGCGACACAGGTTGATCGTGTTTGGCAGATTCAAGCCATCCGATATTGCCATTAAGATCAGAAAGAAAATGAATCGTAGAGTCGAAATCCTCGATGTTGAAGAAATGGAGCCCTTACAAGCCACCGATCAAAACCCACCGCCACCAGAGAACATTCAAGGTCTTGGTTCTGGCCCTGGCCCTGGCCCCAACGTTGATCAACATCACATGCCCATGTTTCCTTCATTGGAGCAAGATCATGGAAGGCCGTCTATGTTTCCATCTCTTGCCGCCAACCAATGCCGTTCCCACCCATCTTGTCGCTCGGATTTCGCCATAACTTGCTTCTCAGAGCCTGACATGGAAGAGCGCTTCTGGCAGTATGGATATGACTATGAACTTGTTGGAGATAGAGAAGAACGACCTACCATCTCTGTTCACAATTACTACCACTACTAGTTTTCCTTTTTCTTTTTTTTTTTCTTTTAAAACTAAAGAGTTCTCTTATACGTACGTATTGATTAGGGTGATTAAATAATTTGTTAACTATTTTAATTATCATTTTACTTCCAAATTATACTTCTTTTGAACATTTTTTAAAGTTTAAAATAAGTTTCTGGTTTTATTTTTTAAATAAAAAAAATTGTTAAACG ATGTCTGAGCTCAAGCAATTTTGTATGGTGATGAAAATCAATGTTGACTGCAATGCTTGTTGTAGGAAGCTTAGGAGGATTGTGTTGAAAATGAAAGCAATCGAGACGTATATGATAGAGAGGGAGCGACACAGGTTGATCGTGTTTGGCAGATTCAAGCCATCCGATATTGCCATTAAGATCAGAAAGAAAATGAATCGTAGAGTCGAAATCCTCGATGTTGAAGAAATGGAGCCCTTACAAGCCACCGATCAAAACCCACCGCCACCAGAGAACATTCAAGGTCTTGGTTCTGGCCCTGGCCCTGGCCCCAACGTTGATCAACATCACATGCCCATGTTTCCTTCATTGGAGCAAGATCATGGAAGGCCGTCTATGTTTCCATCTCTTGCCGCCAACCAATGCCGTTCCCACCCATCTTGTCGCTCGGATTTCGCCATAACTTGCTTCTCAGAGCCTGACATGGAAGAGCGCTTCTGGCAGTATGGATATGACTATGAACTTGTTGGAGATAGAGAAGAACGACCTACCATCTCTGTTCACAATTACTACCACTACTAG MSELKQFCMVMKINVDCNACCRKLRRIVLKMKAIETYMIERERHRLIVFGRFKPSDIAIKIRKKMNRRVEILDVEEMEPLQATDQNPPPPENIQGLGSGPGPGPNVDQHHMPMFPSLEQDHGRPSMFPSLAANQCRSHPSCRSDFAITCFSEPDMEERFWQYGYDYELVGDREERPTISVHNYYHY Homology
BLAST of Cucsat.G5933 vs. ExPASy Swiss-Prot
Match: A0JPW5 (Heavy metal-associated isoprenylated plant protein 19 OS=Arabidopsis thaliana OX=3702 GN=HIPP19 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06 Identity = 22/64 (34.38%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Cucsat.G5933 vs. NCBI nr
Match: XP_004150534.1 (uncharacterized protein LOC101209809 [Cucumis sativus] >KGN45950.1 hypothetical protein Csa_005029 [Cucumis sativus]) HSP 1 Score: 373 bits (958), Expect = 7.35e-130 Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Cucsat.G5933 vs. NCBI nr
Match: XP_008445651.1 (PREDICTED: uncharacterized protein LOC103488610 isoform X1 [Cucumis melo]) HSP 1 Score: 352 bits (902), Expect = 2.62e-121 Identity = 166/184 (90.22%), Postives = 174/184 (94.57%), Query Frame = 0
BLAST of Cucsat.G5933 vs. NCBI nr
Match: XP_038884472.1 (uncharacterized protein LOC120075299 isoform X2 [Benincasa hispida]) HSP 1 Score: 298 bits (762), Expect = 4.21e-100 Identity = 146/183 (79.78%), Postives = 154/183 (84.15%), Query Frame = 0
BLAST of Cucsat.G5933 vs. NCBI nr
Match: XP_016900113.1 (PREDICTED: uncharacterized protein LOC103488610 isoform X2 [Cucumis melo] >KAA0049618.1 heavy metal-associated isoprenylated plant protein 36-like [Cucumis melo var. makuwa] >TYK15978.1 heavy metal-associated isoprenylated plant protein 36-like [Cucumis melo var. makuwa]) HSP 1 Score: 290 bits (741), Expect = 2.45e-97 Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 0
BLAST of Cucsat.G5933 vs. NCBI nr
Match: XP_038884468.1 (uncharacterized protein LOC120075299 isoform X1 [Benincasa hispida] >XP_038884469.1 uncharacterized protein LOC120075299 isoform X1 [Benincasa hispida] >XP_038884470.1 uncharacterized protein LOC120075299 isoform X1 [Benincasa hispida] >XP_038884471.1 uncharacterized protein LOC120075299 isoform X1 [Benincasa hispida]) HSP 1 Score: 286 bits (731), Expect = 4.40e-95 Identity = 146/203 (71.92%), Postives = 154/203 (75.86%), Query Frame = 0
BLAST of Cucsat.G5933 vs. ExPASy TrEMBL
Match: A0A0A0K866 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G032480 PE=4 SV=1) HSP 1 Score: 373 bits (958), Expect = 3.56e-130 Identity = 177/183 (96.72%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Cucsat.G5933 vs. ExPASy TrEMBL
Match: A0A1S3BDX6 (uncharacterized protein LOC103488610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488610 PE=4 SV=1) HSP 1 Score: 352 bits (902), Expect = 1.27e-121 Identity = 166/184 (90.22%), Postives = 174/184 (94.57%), Query Frame = 0
BLAST of Cucsat.G5933 vs. ExPASy TrEMBL
Match: A0A5A7U302 (Heavy metal-associated isoprenylated plant protein 36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001030 PE=4 SV=1) HSP 1 Score: 290 bits (741), Expect = 1.19e-97 Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 0
BLAST of Cucsat.G5933 vs. ExPASy TrEMBL
Match: A0A1S4DVX0 (uncharacterized protein LOC103488610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488610 PE=4 SV=1) HSP 1 Score: 290 bits (741), Expect = 1.19e-97 Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 0
BLAST of Cucsat.G5933 vs. ExPASy TrEMBL
Match: A0A6J1K422 (uncharacterized protein LOC111489856 OS=Cucurbita maxima OX=3661 GN=LOC111489856 PE=4 SV=1) HSP 1 Score: 246 bits (629), Expect = 3.66e-80 Identity = 125/183 (68.31%), Postives = 143/183 (78.14%), Query Frame = 0
BLAST of Cucsat.G5933 vs. TAIR 10
Match: AT3G25855.1 (Copper transport protein family ) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20 Identity = 41/73 (56.16%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Cucsat.G5933 vs. TAIR 10
Match: AT3G21490.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.1e-07 Identity = 22/64 (34.38%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Cucsat.G5933 vs. TAIR 10
Match: AT4G38580.1 (farnesylated protein 6 ) HSP 1 Score: 42.4 bits (98), Expect = 5.6e-04 Identity = 18/61 (29.51%), Postives = 36/61 (59.02%), Query Frame = 0
BLAST of Cucsat.G5933 vs. TAIR 10
Match: AT5G03380.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 7.3e-04 Identity = 24/87 (27.59%), Postives = 44/87 (50.57%), Query Frame = 0
BLAST of Cucsat.G5933 vs. TAIR 10
Match: AT2G36950.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 41.6 bits (96), Expect = 9.5e-04 Identity = 20/62 (32.26%), Postives = 36/62 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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