Cucsat.G19154.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G19154.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	upstream activation factor subunit spp27-like
Location	ctg3517: 34774 .. 38847 (+)
RNA-Seq Expression	Cucsat.G19154.T3
Synteny	Cucsat.G19154.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGCAAAGAGGAGAGAGTAAACGTGGCAAAAAGGGATTGGTCTGTCACCTCACCCACATCCACCCACCGAGCCCCTTGCGGTTACTCACAAAATCCATTTTCTTCATGAATGGACCGCTTTGTCATTTTGTCTTTCTACTCTCACAGAAAGAGAGAGAAAGGAAGAAGCAGAGAGACATAAAGGGAGAGAGAAAGAGAAGACAGAGAGAGTTCTTGAGAGAGAGAGAGAGAGAGAAGGACCGTTAATTTCCGTTAATATATGAAGCAATTTTGAGAGCTACAAGAAGCTAAAATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGGTGGGGTTCTTTTGGTTTTTTCAATTTTGGGGTTTTGGGTTTCTTTTATTTTTTTTAGTTGCCCTCTTTGATTTACTTATTGTTCGTCTTGGGTGTGTATGTTTGTGTAAATCTGTTTCAATTCTGGAGTGAAGTTGATTTCGTTCTGTTTTGATTGCAATTCTACAGAATTAGTGGAATGGCTTCTCGATTTCTTTGCTTATTCCTTTTCCTTTTTGCAACGGTTACTTCATTCGTTCAGAATTAGGTCGGAAAAGGCAGTGAAGTTGTTCGTTTACTTGCTGTGGACTTTGTTTGGAGGATTTTGGAGTGTAGAGTTCACTGATTAGTGGCATTTGGGTTGGTCTTAGTTTTACTCGAGGGTTTATTGTTAATTTTCCCTTGAGTGTTGACTAGGTTCTGCTTCGTTTTCCTCTGGGTTGAGAAGTTTATTCAGGATTTCTGGTCAGAAATGTGACTTTCTGCTTTTGTCGTGGCTGTTGGAAAAGTAAATTTTCTCTTAATGATGCCTTGTCAAATGTGTGTGCATAGGTATCTACTACGAGCATGCTGAGTTTTCATTTATTTTCTGGTTGTTTCCTTTAATTCGTATTATTTTTGCATTCTTGGTTCTAGTCTGGTCAGCACAGCCAGATACCATATGCGGAAAAAAAAATCTTGGGAATTTGTAACTTTGGATTTGTCCATCAGCATGGTAGTGGATTGGTAGGGAGTTAATAAAATGAGAGATGGAAGCTACCCTAGTTTACTGGAAATGGATATTAATGTATGGCATCTACATGTGAGGAGTCTTTATCGTATGCATACATTTTTCTATAAATATCACTGTAGCTTTGACCTCTCAGCACACTTTTGAAAGTGAACGGCTAGCTCCTTCCCAGTCTGGGCTTACTTTTATTTTGCAATCTAGTAATGTATGTAGCTTCGAGCTTGTAATCTCATGATTTCAATGGCCTTACTAGTGATACCTTTTTAAGTATCGATTACCAGCTGGTAGCCATAAGTATGGAACACTTTGTTGTGTACTATAGAGCTACGAAGTAGAATCTTTCAATTAGTTTTCATTCCATGGAAGGGTGAAATGTTTCATTTACTGTTTTATTCAAAGATTAAAATAATACACGTCTCTCTAGTTCTTAGATCCCAAAGATATATGTTTCGACTGATAAAAGCTCACCTTTAAAACTTGAAAGCAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGGTTTCTATCTCTTTCTTATTTCGTAGTTGTTTGATTCTCAATTTTAGCACTTTATGAGGTTCATATGATGCATCTGTGTTTGTTTCAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAGTAAGTATTCAGTTTGATGCTTCCCTGTCCCCCTAGTTCTGGAAGAAACCAATAGTTTATTTTCTAATCCTGTCAGAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGTTGGCAAATAAACTCTGGAAACTTTCACTTTGTTGCATGCTAGCCATTCACTATTAATACCATCTTTTCAACTTGAGAGATCATTTCTTTGTAAAAATTATGCATACAGGACCCTCTGTAATGGATCTTAAAACATGGGGCATTGTTCTCATATGTCAGATTAACTGTTTTTTCTTCATTAAAATGATCTTGTACTCACATGTCTTGGATCTTAAAAACAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGATAGCTATTCTTCTAGGATGGTTAGTGCATTCTAACTTTCTTATATGTTAAAACTGATGTTAGAGTTGAAGGGTAATTTTGAGTTTCCCCATTGTTGCAATTTGACCTCCTTGCCGGCTTCATCATCATGCACGTTTTCCAAAAACATATTATTTGATTGATTGAAATTTCTTCTAGTGTTGGAGGCTGCTGATTGATAACCTGTTATCACTTGTCCTAGTTGGAAATTTATGATGCAGTATGCAGGATAGTTATAAGAAAATTATTGATATCTTCTTAGGATTAAATATATGAGAGTTTTGGGGATTTTGTCTTAGTTTTATGATGGGTCTGTGGGAACCTTCAATTGGATTCTGTTCTTGTACCATTTGCTGGGATTGATGGCAGGATAAAGAAAAAATGAAAGGAAAAACTGTCGAATTGATTATTACCTCATTTAAATTCACCCAGGACTCTGAAGTTGAAACAAACACAAGCCCTGAAATGGAAAATGTTTACTTGAAACTGATTATTTTGTTTTTGTGCCATATGGAAAGGATAAAAAACCTAAGGTAATAAACTAGGACTTGGAAATTCAGTTAGAAATAGAAAGTCAAGTCAAAGATTAGTGATTTGGAGGTCTCTTATTTATTTTGGTCTCCACAAATCAAATCTGAAAATTTAGTATATGGAATGTATTCTTGTACAAAGTTTTCTTTTTGAGTTCATAGATGCCTTATTTGATTATCTGTAAATGAAGACACAATGATTTGAAGCTTTATTTTGTGCAATCATAGCTTTTCACCCTTGAGGCCCCGTTTAATAATAATTTGGTCCTTCAAAATTAAGTTTATGAATTAAGCTTTTAAATGTTATTCCCACCAATGAGTTCCATTATTTTGTTATATACTTCTCCAAATATTTTCAAATCCAAGCCAAATTTTACAAAACTTGATTTTGTTTTTAGAATTTGATCTTTAGAATCTAATTATTTGTTTAAGAGAGATAAAGTCCAATTTTCAAAATCCAAAAACTAAAACTAAAATTATAATCAAATGGGCCCTTGGTTATTTGAATTTCAATTGACGGTTGTTTTCTTTTTTTCCTTTTCTTCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAACCGAAGGGATTACCTTCTTTCTGACCGCTTTTTCCA

Coding sequence (CDS)

ATGGTTACAGACCAAGAGCTTTCTCAAGCTATACAATGTCTTCTTCGCGACTCTGCTTCTCCTACAAACCCTAACCCTTTTTCTTCTTTAAACGCTGTTGTTCAGGAGTTGCAGACCAAGCTTGGTCTTGACCTCTCTCATAAACTCGATTTCATCCATGCCCAGATCCAATTTATCCTTCGTTCTCATCCTCAACAACCCCATCATCACCAACATCACCACCACCACCACCATCAGCAGCAGCAGCAACAACAACTACCCTCTTCGCAGAAAGACCTCTTTGCCCTTCATCAAAGCCCTAATTTTCAATCTGCGCCTTCCCCCACTTCCTCTGCGTTTCACACTTTCTCTGCTCAGCCTCCGCCGGCTAAGCCGGATTCCGTCGTTGCTCCCACTGTTCCGGGCTCTGACCCGCCAAAGGAAAGTACCCAAACCAAAACTAAGAGAAGAGGAGGCCCCGGGGGTCTAAACAAGCTTTGTGGTGTTTCTCCTGAACTTCAGGCTATTGTTGGCCAGCCAGAATTACCGCGAACTGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACCTACAGGATCCAAGTAACAAGAGGAAAATAATATGCAATGATGAGCTGCGGTTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTGGCCAAACACATCATTCCTCTTGAACCTACAAAACCATCAAGTTCTAAGAAGGCACGAGTGGAGAATGAATCCGCAGTTAGTGTTAAAAGTGCAGAACCCAGTATTTGTCCTTCTGTGATTATATCTGAAGCACTAGCAAATTTTTTTGGCGTTGATGGTAGGGAGATGCTCCAATCAGAAGTTCTGAGACGCATCTGGGAATACATAAAAGTGAATCATCTTGAGGACCCTCTGAACCCGATGGCGGTGTTGTGCGATGCAAAACTTCGAGAACTGTTTGGTTGTGAAAGCATTTCTGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCATATATTTAGGAGATCGTGA

Protein sequence

MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFILRSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQPPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSSSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHLEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS

Homology

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BLAST of Cucsat.G19154.T3 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.7e-13
Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 162 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 221
           +S  LQ  +G  ELPRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF 
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMT-MFS 185

Query: 222 MNKLLAKHII-------PLEPTKPSSSKKARVENES 251
           MNKLL KH+          E  K +  K+ ++ENES
Sbjct: 186 MNKLLTKHLFNPDEIVKHEEEQKQTPEKEIKLENES 220

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BLAST of Cucsat.G19154.T3 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.7e-13
Identity = 36/78 (46.15%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 162 VSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFK 221
           +S  L +++G+ EL RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L L+     T+MF+
Sbjct: 126 LSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILGKS-TNMFE 185

Query: 222 MNKLLAKHIIPLEPTKPS 240
           M+K+LA H+   EP K S
Sbjct: 186 MHKILASHM--TEPKKIS 200

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BLAST of Cucsat.G19154.T3 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-09
Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 79  QQQQQQQLPSSQKDLFAL-HQSPNFQSAPSPTSSAFHTFSAQPPPAKPDSVVAPTVPGSD 138
           +++++  L + +KDL AL  +  +  +APS   S       +  PA+       T  G++
Sbjct: 30  EERRKVDLSAHKKDLNALILKCFDETAAPSEKESL-----EKQAPARKTKGKRATENGTE 89

Query: 139 PPKESTQTKTKRR--GGPGG------------LNKLCGVSPELQAIVGQPELPRTEIVKQ 198
             K+  +   KR+  G  GG            LNK   +SP+L   +G  +L R + VK+
Sbjct: 90  EGKKPAKRTRKRKEDGEEGGKRKRNQDPANNPLNKPMKLSPKLAEFLGLEQLSRPQTVKK 149

Query: 199 LWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLL 227
           LW YI+ ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Sbjct: 150 LWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMNKYL 187

[Close]

BLAST of Cucsat.G19154.T3 vs. NCBI nr
Match: XP_004150254.1 (angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015454 [Cucumis sativus])

HSP 1 Score: 668 bits (1724), Expect = 5.93e-242
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180
           PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300
           SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL
Sbjct: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300

Query: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Cucsat.G19154.T3 vs. NCBI nr
Match: XP_031744592.1 (angiomotin isoform X1 [Cucumis sativus])

HSP 1 Score: 664 bits (1712), Expect = 4.15e-240
Identity = 342/343 (99.71%), Postives = 342/343 (99.71%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPDSVVAPTVPGSDPPKES-TQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPAKPDSVVAPTVPGSDPPKES TQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T3 vs. NCBI nr
Match: XP_008447697.1 (PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_008447700.1 PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >KAA0048155.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa] >TYK08100.1 box A-binding factor isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 656 bits (1693), Expect = 3.27e-237
Identity = 339/343 (98.83%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQ-LPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120
           RSHPQQPHHHQHHHHHHHQQQQQQQ LPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP AK DSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T3 vs. NCBI nr
Match: XP_038900174.1 (uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida])

HSP 1 Score: 617 bits (1592), Expect = 5.77e-222
Identity = 319/342 (93.27%), Postives = 324/342 (94.74%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNP SSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASATNPNPLSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQQPH + HHHH        QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ 
Sbjct: 61  RSHPQQPHPYHHHHH--------QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQL 120

Query: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180
           PPAK +S V+PTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI
Sbjct: 121 PPAKAESAVSPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300
           SKKARVENESAV VK AEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL
Sbjct: 241 SKKARVENESAVGVKGAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300

Query: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           EDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 EDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHIFRRS 334

[Close]

BLAST of Cucsat.G19154.T3 vs. NCBI nr
Match: XP_038900172.1 (uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_038900173.1 uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida])

HSP 1 Score: 613 bits (1580), Expect = 4.04e-220
Identity = 319/343 (93.00%), Postives = 324/343 (94.46%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS TNPNP SSLNAVVQELQTKLGLDLSHK+DFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASATNPNPLSSLNAVVQELQTKLGLDLSHKVDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQQPH + HHHH        QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ 
Sbjct: 61  RSHPQQPHPYHHHHH--------QQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQL 120

Query: 121 PPAKPDSVVAPTVPGSDPPKES-TQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPAK +S V+PTVPGSDPPKES TQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPAKAESAVSPTVPGSDPPKESSTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAV VK AEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVGVKGAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           LEDPLNPMAVLCD KLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDGKLRELFGCESISALGIPEVLGRHHIFRRS 335

[Close]

BLAST of Cucsat.G19154.T3 vs. ExPASy TrEMBL
Match: A0A0A0LEG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1)

HSP 1 Score: 668 bits (1724), Expect = 2.87e-242
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120

Query: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180
           PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI
Sbjct: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300
           SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL
Sbjct: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300

Query: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342

[Close]

BLAST of Cucsat.G19154.T3 vs. ExPASy TrEMBL
Match: A0A1S3BI07 (uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490111 PE=4 SV=1)

HSP 1 Score: 656 bits (1693), Expect = 1.58e-237
Identity = 339/343 (98.83%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQ-LPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120
           RSHPQQPHHHQHHHHHHHQQQQQQQ LPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP AK DSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T3 vs. ExPASy TrEMBL
Match: A0A5D3C9T5 (Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002610 PE=4 SV=1)

HSP 1 Score: 656 bits (1693), Expect = 1.58e-237
Identity = 339/343 (98.83%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL
Sbjct: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQ-LPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQ 120
           RSHPQQPHHHQHHHHHHHQQQQQQQ LPSSQKDLFALHQSPNFQSAPSPTSSAFHTF+AQ
Sbjct: 61  RSHPQQPHHHQHHHHHHHQQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFTAQ 120

Query: 121 PPPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PP AK DSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE
Sbjct: 121 PPTAKADSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH
Sbjct: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 343

[Close]

BLAST of Cucsat.G19154.T3 vs. ExPASy TrEMBL
Match: A0A6J1CGF4 (uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010586 PE=4 SV=1)

HSP 1 Score: 585 bits (1507), Expect = 2.89e-209
Identity = 302/342 (88.30%), Postives = 313/342 (91.52%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MVTDQELSQAIQCLLRDSAS  NP+ FSSLNAVVQEL+TKLGLDLSHK+DFIHAQIQF+L
Sbjct: 1   MVTDQELSQAIQCLLRDSASAANPSAFSSLNAVVQELETKLGLDLSHKVDFIHAQIQFLL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHP  P H    HH HHQ    Q  P  QKDLF LHQ+PNFQSAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPLHPQH----HHRHHQPPPPQPPPPPQKDLFTLHQTPNFQSAPSPTSSAFHTFTAQP 120

Query: 121 PPAKPDSVVAPTVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180
           PP KPD+ VAPT+  SDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI
Sbjct: 121 PPPKPDTAVAPTLAPSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTEI 180

Query: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240
           VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS
Sbjct: 181 VKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPSS 240

Query: 241 SKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNHL 300
           SKKARVENES + VK AE SICPSVIISEALA FFGVDGREMLQ+EVLRRIWEYIKVNHL
Sbjct: 241 SKKARVENESGIGVKGAESSICPSVIISEALAKFFGVDGREMLQTEVLRRIWEYIKVNHL 300

Query: 301 EDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           EDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 EDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

[Close]

BLAST of Cucsat.G19154.T3 vs. ExPASy TrEMBL
Match: A0A6J1FLX5 (uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC111446611 PE=4 SV=1)

HSP 1 Score: 582 bits (1499), Expect = 4.79e-208
Identity = 300/343 (87.46%), Postives = 319/343 (93.00%), Query Frame = 0


Query: 1   MVTDQELSQAIQCLLRDSASPTNPNPFSSLNAVVQELQTKLGLDLSHKLDFIHAQIQFIL 60
           MV+DQELS+A+QCLLRDSASP+NPNPFSSLNAVV ELQ+KLGLDLSHK+DFIHAQIQ IL
Sbjct: 1   MVSDQELSEALQCLLRDSASPSNPNPFSSLNAVVLELQSKLGLDLSHKVDFIHAQIQLIL 60

Query: 61  RSHPQQPHHHQHHHHHHHQQQQQQQLPSSQKDLFALHQSPNFQSAPSPTSSAFHTFSAQP 120
           RSHPQQP  HQ+HHH     QQQQ  PSSQKD+   HQSPNF SAPSPTSSAFHTF+AQP
Sbjct: 61  RSHPQQPQIHQNHHH-----QQQQPPPSSQKDILPPHQSPNFPSAPSPTSSAFHTFTAQP 120

Query: 121 PPAKPDSVVAP-TVPGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQAIVGQPELPRTE 180
           PPAKP++  AP T  GSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQ IVGQPELPRTE
Sbjct: 121 PPAKPETAAAPSTAVGSDPPKESTQTKTKRRGGPGGLNKLCGVSPELQTIVGQPELPRTE 180

Query: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIIPLEPTKPS 240
           IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHII LEPTKPS
Sbjct: 181 IVKQLWAYIRKNNLQDPSNKRKIICNDELRLVFETDCTDMFKMNKLLAKHIISLEPTKPS 240

Query: 241 SSKKARVENESAVSVKSAEPSICPSVIISEALANFFGVDGREMLQSEVLRRIWEYIKVNH 300
           SSKKARVE+E A++VK+AEPS+CPSVIISEALA+FFGVDGREMLQSEVLRRIWEYI+ NH
Sbjct: 241 SSKKARVESEPAIAVKAAEPSVCPSVIISEALASFFGVDGREMLQSEVLRRIWEYIRANH 300

Query: 301 LEDPLNPMAVLCDAKLRELFGCESISALGIPEVLGRHHIFRRS 342
           LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Sbjct: 301 LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS 338

The following BLAST results are available for this feature:

BLAST of Cucsat.G19154.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05024	7.7e-13	39.58	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q08747	7.7e-13	46.15	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
O74503	1.8e-09	33.74	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of Cucsat.G19154.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150254.1	5.93e-242	100.00	angiomotin isoform X2 [Cucumis sativus] >KGN44294.2 hypothetical protein Csa_015...	[more]
XP_031744592.1	4.15e-240	99.71	angiomotin isoform X1 [Cucumis sativus]	[more]
XP_008447697.1	3.27e-237	98.83	PREDICTED: uncharacterized protein LOC103490111 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038900174.1	5.77e-222	93.27	uncharacterized protein LOC120087296 isoform X2 [Benincasa hispida]	[more]
XP_038900172.1	4.04e-220	93.00	uncharacterized protein LOC120087296 isoform X1 [Benincasa hispida] >XP_03890017...	[more]

BLAST of Cucsat.G19154.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG4	2.87e-242	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G758990 PE=4 SV=1	[more]
A0A1S3BI07	1.58e-237	98.83	uncharacterized protein LOC103490111 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C9T5	1.58e-237	98.83	Box A-binding factor isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1CGF4	2.89e-209	88.30	uncharacterized protein LOC111010586 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1FLX5	4.79e-208	87.46	uncharacterized protein LOC111446611 OS=Cucurbita moschata OX=3662 GN=LOC1114466...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 156..235 e-value: 1.2E-44 score: 164.3 coord: 261..342 e-value: 1.6E-9 score: 47.6
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 266..336 e-value: 2.1E-18 score: 65.9 coord: 160..230 e-value: 1.3E-27 score: 95.5
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 260..339 score: 19.366796
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 155..232 score: 22.405313
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..59 e-value: 5.4E-7 score: 29.4
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 151..241 e-value: 1.4E-30 score: 107.0 coord: 258..341 e-value: 3.9E-20 score: 73.5
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 149..235
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 260..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..159
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..338
None	No IPR available	PANTHER	PTHR13844:SF62	SUBFAMILY NOT NAMED	coord: 1..338
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 265..336 e-value: 7.20407E-20 score: 80.2801
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 160..230 e-value: 2.51782E-40 score: 134.593

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G19154	Cucsat.G19154	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T3.E1	Cucsat.G19154.T3.E1	exon
Cucsat.G19154.T3.E2	Cucsat.G19154.T3.E2	exon
Cucsat.G19154.T3.E3	Cucsat.G19154.T3.E3	exon
Cucsat.G19154.T3.E4	Cucsat.G19154.T3.E4	exon
Cucsat.G19154.T3.E5	Cucsat.G19154.T3.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T3.C1	Cucsat.G19154.T3.C1	CDS
Cucsat.G19154.T3.C2	Cucsat.G19154.T3.C2	CDS
Cucsat.G19154.T3.C3	Cucsat.G19154.T3.C3	CDS
Cucsat.G19154.T3.C4	Cucsat.G19154.T3.C4	CDS
Cucsat.G19154.T3.C5	Cucsat.G19154.T3.C5	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19154.T3	Cucsat.G19154.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus