Cucsat.G16818.T15 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAACTCCAAATTCAAATCTACCTAGATTGGTTTGGTTTTCTCGGATTTTGGGTTTTTGTATCAAGTTAGTTATTGAAAATTTTACTACAATTTATAAATAATTTTGATTAATAATACAATAAATTTGAAATATTAAAAAATTTAGAAAATTGATGTCATAAATCATAAATAAAATTTATTGTATTTTTGTTCCATCTTGGAAACAAAGAGAAGGCCGGATTGAGATTCAGATTCATCGGAAATTTTAATTTTAGCTTTCACCATAGTTGACCTCTTTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTCCGTCTTCTTCAGCCCTAATCCCTCCCTCCACCACTCCCACTTCTCCTTCATTTCCCATTCCAACGCTCCCTCCATTATTTCCCACCTCAACAATGGTTATCTCTCCCCTCCATGGCGCCCTTTTCCCTTTCCTCTTTTAGTATCTGCTTCCCCCTACCTCTGACAACTCACCACTCACTGTCCTTCATTCCCTTCGTCCTCTGTAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTATTGATTCTTGCTTATTGTCGGATCTGGATTCTGATTTACCCGTTTCTAGTATGGATGGATTTGAGCTTCGATGTTTGCATCGCTTTCTTGGGTTTACCCTACGTGCATGGGAAATTATTTTTGTGTTTACCGTGTAGGCTGAGGGGATTTAATAATTTTGGATTTCGATATCTTTTTCCTTATAGATTAAGTTCGAATCAGTGATTTATTACACTTTCATTTCCATATTTTAAGTTCCTGTTGATTGCCCTAATTTCTGATGCGAAGTGCTCAATCTAATCACTAATGCACATTGAGAAGCAATGTGTGAAGATGTGCAGTTTCTATCTCGATTTTTTATGTTTTATTTGATGACCGAACTGGAACCTGACTTTTTTTGTGTCCATTATAACTACGAGCAATTTCTAGTTCTTTAGTAGGATAGATTACTTGCTTGCATCACGATCTTTAAGAACTCGGCTAAGAAAGTGGATGCCGACTGTATTAGGTTTTTAAAGCTGTGTTTGTTGCAAGTGGTTTGATATTGATGTGCAATATTTTCTTTCTTTTTTTTATTTTTTTTAATTACTGGCCTGGTCTATATTCACTGGCATTCGATTATCCGTATCATATGGTTTGAGAATGATCGAGTTGTTAACTTGAAAGATGAGAAGAAGAATGCTATTGCTACACGTTTATTTATTGCTAGATAATGTTTTTTCAACGCTCAGCAGGTGGCCTCCTAGTAGGCAAGTTTATGAGCTGGGTGGATCATTACAGTGAAGTTCCAAGGGAAATTCTTGAATAGGTTTTTCAAACCCGACTTGAAACAGAAGTATTTCGTTAAAAGAATGCAGAATCAGGAAAATCTCGATGCAGATGGGAAAGCGGAGTCTGTAATATCCATTCAAACATCAGAATACGATTCCTGGGGCAATTTGGGTGATGATGATATCATGCTGCAGAAATCTGCAATTTTTGTTCAGGAAGCTGAGAAAGTTCCATTTGTCGGTGACAAGGCATGTTTCACCCAACTAAGTTTTAGTCTCCTGCATTGTCCTGTCTTGATCTTGCCACACTTTTTCCCTCCTCTTCCTTCACGTGTCTGTGTTATTTATGATTCTATGCATGTAGGAAACGGAGTTCTACTCCTTAGTCTTTCTTTCTTTTCCCATAAATTATGCTATGAAGTAGTACTCTTATTTTATTTGCTGCAACATGTTTGGGAAGTTCTCAAAACGTAACCTAGGTTTGGAAATTATTTAGAACTTAGAAATGTTTGTGGGATTCTGCATTGCTTTTTGCTTCAAAAGCCACCCTTTCTGTATGTTTAATGGCGTTTTTGGTGTCTAACCTTTGGGCCTACAGTTCTAACCCTTTTTATCATGTTTTTGTTTGTTCTTAATTCGTATCTTAACAATTGGAGGTCCATCTTATTAGTTATTATTTTTCCTACTTTATTTTGGCTTGGCTCTATTTTTTCATTTTCATTTCCTGAAAGTGAATCTGTATTCTCTGCTTTTTCCACTCTTTTTACTCCTTTTGGAGTTTGTATTCTTTGAGCAATAGTCTCTCTGTTCAAAGTAGTTCTTTCTCTTGTTTTTTAGGGGTGGAAAGGGACTCTTGTGATGTTTGGGCTTGGTGAAGTTTCAAGCTTCCCTTTGGGCTTCAATTTTGAGGACTTTTTGTAATTACTCTTTAGTTTACATTTTACTTTCTTGGTCCACTTTCTCTAGTAGGGCTTTTGTGTGCTTGGTTTTTTGTATGCCCTTGAACTCTTTCACTTTTTCTCTATGAATAGTTTTCCATAAAAAAATTTAATTAAAAAAGAAAGAAGTGAATGACTCTTTGAAAGTTCTTTTTACCTTTTTAACGTATGTTTTGAATGCCTTACAACTGTGGCCTTGTAGTAAGATGTTTTTATCAGTTAATTTTTCTTTTACTCCGTAATGAATCTTAATGGCAATGGTTTTGCAGGAACCACTTTCTTCTTTAGAAGCTGAATATAAATCGGGAAGTCCAATTTTGCTGGAGAAAATTAAGGTTTTACTTGTTGCTTATTGTTATTTTAGTAGAGTTGTCCTTGGAATAATTATTTATGTTACATGTTATGCAGGTGCTCAGTGGCCAGTATGCTGCCATTCGTCGAACACGTGGTGATGGGAACTGCTTTTTCCGAAGCTTCATGTTTTCTTATCTTGTAAGTTTAATTCTTTTAATTTATCTCATTTACTTTGCTATTATACTTTTTGTGCATCATCGAGCATCAGCTGTTACTGACTTGGCCTCTCAAATCAGGAACACATTTTAGAGTCACAAGACAAAACTGAAGTTGATCGCATCAAAACAAATGTTGAAAATTGTAGGAAAACACTTCGAAGTCTGGGATATACAGAATTTACCTTTGAAGATTTTTTTGCGGTAAATTCCTACCATTCCTTTTTTTTTTAAAAAAAAACAATTAATCTATTGCACATTATCGCCCTATGCTCTAAGCAGTATGGCTTATTTCTTCCATTCAACTGGAATTGGTGGAAGTTGAGAACTATTCATACTAGTCTCTAAATGTGTTATTGAACATACCATATATAAATATTGTGTAAGATACTTAATTAGGGAGATTGGTATGGTATTAGTAAGGGGCATAAGGGCAATTAGATTGGGAGTTGATGTATCTTGTTATAAATAGGAGAGTCAGTGAGGGAAGGTGCCCAGCAATTGTCGAGTGTTATAGGGCTTGGGATGCCATACTCAAGAGGAAGGTTCCAAGTGCCTTATATTGGATTATCTCGTAGTTCCATCTTTATCAATTTTATTGTTGTTGAGATGTTTTCTTTGCAGTTTGTGATGGTATAGTAGGTTTATTTTCCCTTTTTTGAACCTTTCCATCTAAGTATGTGCTTTCTCTCCAATTGATGGATATGAATGAGGAAATTAGACCAAACTAAAGAGGACTATAGGGGGCTGCAAGTTCAATGATGGAAAGGTGGTGATGAGAATCTATTAATGAAATTGGCCCCTCCACTTTGTAATTTCATCCATTAATGAAATTGTCTCTTAACAAAAAGAAAAAAAGTGGTGATGAGAATCTATTTTTTGTGATGCCAGATTTAACATTAACGTCATTGCAATGACATCTCATATTGAATTAACTTTGAATACGAACATTTTGTATATTATGTCTTTACCTCATCGAAGTCCAGTCTTTTTCATAACTCATATATAGACTCTAGAGCTATTCTTTAAAAATGTGTGGACCAACTTTTAAATACATTGTTCCAGATTTATACTACCTTAAAGATGTCTAGAGCCTAGACTCGTCCTTCTTTATTATTGCTGTCTTTGTTTCATTTTGGTATAAACTGGCTAGATATCCTTGGTGGTTAATGATGGGTGCCATAAATATAAATTATTTATTAATAAATATGTTTAAAATATCTTTACAGCTATTCCTTGAGCAGCTGGAAAGTGCTCTTCAAGGAAATGAATCCTCTATAAGGTGTCAATGACCTGCCCTTCTACCTTGGAATTTTGATTCCTGAATTTTTAGTTGATAGTGCAATTTTCTGTTGCCATCAATTATGAAATTTTGCCATTCATGATTGCATTTGACTCTTATTTTTCTTGGATGCAGTCATGAAGAACTTGTTATTAGGAGTCGGGACCAGTCTATCTCTGATTATGGTCAGTGATGTTTTATATTCAATATTGAATTCTCTCTTTCCATTTCTACTGACAAAATTGTTTTTCTAGTTGTTATGTTTTTCAGGTTTGTTACATCAGGTGAAATACAAAAGCGTTCAGAATTTTTTGAGCCTTTTATTATGGGATTGACAAATGGAACGGTTGATCAGGTTTCCTAAATTTTTAACCCCTATAAGTTTTGCATTATGTTTTGACTTTTATCTTTAGATTTATGTTGGAAATTCAACCCTACAAGATATTTGAAATCTAAGCTGATTTGGCTAGGTGAACCCTTTTACAAGTGTAGTTTCAAGCAGAAGCAGCTAATTGTTATAAAGCAATAATGATGATTTAGACCATGTATACCTTGGACAGGAATAAGAATGGATATTTACGATTTCCGCTCTTGTTTACTTCTTCTTGGGATTGGAATAAGTATAACCCACTTAAGAATGTAGAACCTTGCTCTTATTTTGGAGCAACATCTTTACTTCATAATAGATAACCATTCTCTCTCCTATTGCTGTTCTATGGGTTCAAAGTCTTTTCTGTGGGTCTGTTGACCTTTTTTCCTCATTCTAAAAATCTAAATGTTAACAAACAATATCGTATCAACCACCGTTTTCTTATTCCAGACTTCATAATAATTGTAGTAAACAAAGTTTCAGAAATTCTATTTCAAATCCTTTTTTTTTTTTCTATTCAATCAGACATGATGGATTGCCATATGGTTTTATTCCCTCATTAAATAAACTAAGCCTTGGGTTCATGATTTTATCATCACATTTATATTTAAATGAAATCACTTTAGCCTTATTATTTCCCTTTTTTTGAGTGCACATGTGGGGATTTAAACTTTTCAACCTTGTTTCCATTTCAAAAGAAAAAAAAAAAAAATTTAAACTTTTGACCTTTTGGTCTGCTATTATTCCCTTTTTGGTGGATCAGAATCCCAAACAACAGTAAGCCTTGGTCTTTGTGTTTGGGGGTTAACTTTTCCAAGGGTTGGTCACTTATGATGATAATTTTTAGTTTTTGGTTTGGTGGGGAAACTAGACATAGACCTGAACATGGTTGGACTCGTATTAACTTTGTAAAAAGTCAAATGAACATTTAATTTCTTATTTAAGAAGAAAGAGAACCTATTTATCATGACTTCCAATCTCATCCTCTTTGGCACAGTTCTGCAAGACAGCAGTTGAACCAATGGGTGAAGAGAGTGATCATGTACACATAATTGCCTTATCTGATGCTTTGGGTGTGCCGATTCGTGTTCTGTACCTTGATCGAAGCTCCTGTGATTCTGGTGGCCTCAGTGTAAACCACCATGATTTTGTTCCTGCTACCACTGAGGTCGCAAGTGGTAGTGCTGCCTCTGAGATAAAGATCCCTTTCATTACTTTGCTCTATCGCCCTGGTCATTATGATATCCTTTATCCAAAATGATGGTAAACTTCTCTCACGAACTTATTGGAAAATTTTCCATAGAAATATCACTTCTTCCCCACCTATTATATGCAACAGATCAAATTTAATCTTTATAAAATGTTGATGTTTAAGAATTAAGAGTATATTATGGCTGCCATATCCTCATTCCGCATGCAAAAATGATATTTTCATCTGTAGTTGTCTACCGTTATTTGCAAATTTGTTCAAGTCTTTGATTCACTTGAGGATTTTTGTTCTGGGTGGTTCAGCTTGAATTATATGTTATTTATTTCAGGGTGGTGGGGCTCTCAGAGTTGAACTGCATTGACACGGCGGACATGGATCCAAGCTTCGACAAGATTAAAGGTTGGATCTTCATAATTGCTAGATGTTGTTCTGTACTGATTTTAATTACTGATGAGCTTGTTTGAGTAAAAAAAGAAAGGAATTATATTCACCAGTTAACTGAAATTTGAAATATACATGTGAATCAGTCTTCGAGTTTTTCAGTCATCTTGCAAATAGATTTCCTTACACAATCTCTTAGAATGTTTGAGAATTGAGATATAGTATTTCAATCCAATTTCAATACAGGGACACTATTACTTGGGGTGATGTTCTTAAATTCTAATAACTTACAATTCAACCCTAGGATTTAGAGAAGTTCATATTTGTATATGTACATTTTGAGCCAAAATGGATGCATCTTGCTATGATTTCAAAAATATATTAGTAGCAGAACATATTCTCAGTGATTGAAGTTTTTGGTGTATTAATGT ATGCAGAATCAGGAAAATCTCGATGCAGATGGGAAAGCGGAGTCTGTAATATCCATTCAAACATCAGAATACGATTCCTGGGGCAATTTGGGTGATGATGATATCATGCTGCAGAAATCTGCAATTTTTGTTCAGGAAGCTGAGAAAGTTCCATTTGTCGGTGACAAGGAACCACTTTCTTCTTTAGAAGCTGAATATAAATCGGGAAGTCCAATTTTGCTGGAGAAAATTAAGGTGCTCAGTGGCCAGTATGCTGCCATTCGTCGAACACGTGGTGATGGGAACTGCTTTTTCCGAAGCTTCATGTTTTCTTATCTTGAACACATTTTAGAGTCACAAGACAAAACTGAAGTTGATCGCATCAAAACAAATGTTGAAAATTGTAGGAAAACACTTCGAAGTCTGGGATATACAGAATTTACCTTTGAAGATTTTTTTGCGTCATGA MQNQENLDADGKAESVISIQTSEYDSWGNLGDDDIMLQKSAIFVQEAEKVPFVGDKEPLSSLEAEYKSGSPILLEKIKVLSGQYAAIRRTRGDGNCFFRSFMFSYLEHILESQDKTEVDRIKTNVENCRKTLRSLGYTEFTFEDFFAS Homology
BLAST of Cucsat.G16818.T15 vs. ExPASy Swiss-Prot
Match: Q8LG98 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 OS=Arabidopsis thaliana OX=3702 GN=OTU1 PE=1 SV=2) HSP 1 Score: 191.4 bits (485), Expect = 7.1e-48 Identity = 98/147 (66.67%), Postives = 114/147 (77.55%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy Swiss-Prot
Match: Q96FW1 (Ubiquitin thioesterase OTUB1 OS=Homo sapiens OX=9606 GN=OTUB1 PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 5.5e-16 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy Swiss-Prot
Match: Q7TQI3 (Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 5.5e-16 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy Swiss-Prot
Match: B2RYG6 (Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.5e-16 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy Swiss-Prot
Match: Q9VL00 (Ubiquitin thioesterase otubain-like OS=Drosophila melanogaster OX=7227 GN=CG4968 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 9.4e-16 Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. NCBI nr
Match: XP_004152159.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Cucumis sativus] >XP_011653009.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Cucumis sativus] >KGN52967.1 hypothetical protein Csa_014673 [Cucumis sativus]) HSP 1 Score: 292 bits (747), Expect = 3.31e-97 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. NCBI nr
Match: XP_008454143.1 (PREDICTED: ubiquitin thioesterase otubain-like [Cucumis melo] >XP_008454144.1 PREDICTED: ubiquitin thioesterase otubain-like [Cucumis melo]) HSP 1 Score: 289 bits (740), Expect = 3.84e-96 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. NCBI nr
Match: XP_038896692.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Benincasa hispida] >XP_038896698.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Benincasa hispida] >XP_038896706.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Benincasa hispida]) HSP 1 Score: 288 bits (736), Expect = 1.56e-95 Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. NCBI nr
Match: KAA0044504.1 (ubiquitin thioesterase otubain-like [Cucumis melo var. makuwa]) HSP 1 Score: 276 bits (706), Expect = 1.14e-90 Identity = 141/147 (95.92%), Postives = 142/147 (96.60%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. NCBI nr
Match: TYK29632.1 (ubiquitin thioesterase otubain-like [Cucumis melo var. makuwa]) HSP 1 Score: 275 bits (704), Expect = 2.29e-90 Identity = 141/147 (95.92%), Postives = 142/147 (96.60%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy TrEMBL
Match: A0A0A0KX37 (Ubiquitin thioesterase OS=Cucumis sativus OX=3659 GN=Csa_4G007720 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 1.60e-97 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy TrEMBL
Match: A0A1S3BZ50 (Ubiquitin thioesterase OS=Cucumis melo OX=3656 GN=LOC103494633 PE=3 SV=1) HSP 1 Score: 289 bits (740), Expect = 1.86e-96 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy TrEMBL
Match: A0A5A7TN16 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002440 PE=4 SV=1) HSP 1 Score: 276 bits (706), Expect = 5.51e-91 Identity = 141/147 (95.92%), Postives = 142/147 (96.60%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy TrEMBL
Match: A0A5D3E124 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002440 PE=4 SV=1) HSP 1 Score: 275 bits (704), Expect = 1.11e-90 Identity = 141/147 (95.92%), Postives = 142/147 (96.60%), Query Frame = 0
BLAST of Cucsat.G16818.T15 vs. ExPASy TrEMBL
Match: A0A6J1GWQ8 (Ubiquitin thioesterase OS=Cucurbita moschata OX=3662 GN=LOC111457855 PE=3 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.81e-89 Identity = 134/147 (91.16%), Postives = 141/147 (95.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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