Cucsat.G12179.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAAAAAAAAAAGGCATTTGTTTTGTATTGATTTTCGGGTTGTTTTATTATTATTATTAATTTTTCGGGGGAAGAAAAGAAAGCGGAGAGTGAGAGGAAGGGAGAGAGAGAGAGAGAGTTTGACGAATGTATGTGGTATGAGAAGAAAACAAGAAAATCCCTAAAAAGTTACTCTGAACTTTCCAATTTCTTTCGTCGTAGGGACGATGGCGGTGGATTAGCCTGCAAAATTATGCTTCTGAGTCTTCCATAATTCCCCTTCTCATCTTAATTTTTGGTTTTCTGCGGATAAACGTAACAGGTCTTCTGTTTCATCACACACACGGAGAACGGAGGTAACGATGTCTTTATCCTCTTCTTCTTCAGCGACTGTGGCAGTCGAGAAAGCCACCAGCGACCTTCTAATAAGTCCTGATTGGACTATGAACATCGACATATGCGATTCCATCAATTCTAATCATTGGTACATCAACCAATTCATCTTCCCTTTGACTTTTTTGTTTATTGAATTTACGCTCGATCAATTTTTTTTTTATGCCTGAAACTTCTTTTGATTACTTCCTTTTTCATTTCATCTATACCATGTTGGACGAGGGGACATATATCCTGTTTTTCCGTTTTTTCATGACATATAATAATAATAATAATAACAATAATAATCAATTTTTATCCTCTTTCCTGTTTTTATTTTTTTTTGGTCAGGTATTTTTGTTGGAAATATTCTTTTACATGTGAATATTGGTTTTCAGGATTCCTGTTGTTATTAGTATTATCATTTATTTTTGTTTTTAAGATGCCTCTAATCGCAACAGCGTTCGCTTGATTTCTCTGGGGCTGGTATTAGTAGGCGTTATATTTGAGGTGGATGTAATTTTTTTTCCCTTCCCCTTTCTGAAAGTGACGTTCAGAGCAACTTCTTGGCGAAGGAAGTTTTGTTTGACATCAAGTTAACGTTAGGCTGATGGTTTATGAATTCGATTCTTAATTGGTTAATGTTCTTAATTATTTTATTGGTTGGTGGGTAAGAGGGGAAGATGGCGTACTAGGCTTTATCTAGAAGCGTCTGAAACCATATTTCTCTTTTACCGTTATTTCCATGTTTTTAGCTTCCTCATTCTTTTGCTGAAATCTAGAACTCGTTGTTTAGCCAACTTTGTGTGTGGTCAGGCAGGCGAAAGATGTCATGAAAGCTGTGAAAAGAAGGTTGCAACATAGAAATCCTAAAGTTCAGCTGCTGTCTCTTACGGTAAAATTTCCCTTTCCAATTCCTTCTCAACCCCACTGGAGGTCCAACCCAAAAAACTAAAATAAATTGTGAAAAATCTTACTCTATCGACATGCAATTGATCATCAAATAGATCCCATGTAGCAAGTTTTAGATTCAAGGTGTCTGAACAAATGCTTTGCTGATCTTGTGAAATGTAGCTTATCGAGACAATGGTGAAGAATTGTGGTGATTATGTCCATTTTCAGATAGCCGAGAGAAATATTCTAGGAGAGATGATCAAAATTGTGAAGAAGAAGGTAAACGCTTAAGTTCTTTTATTTGGTTTGTGCATTTTTTTAAGTAATTCTGCATTCAGTTTTATTTCTTGCTAGGAACTTTTTATCGTTAATGGTGTTGATTTTATGGAATCAATCTATATTTCATTCATTACTTAATAGAGATACAAGCCTATATATAACCATAGAGAAATACACTTAAGCAAATAATATCAAATAATATCTCCAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATCTAATTATATTAATACCCTCCCTCAAACTCAAGGTTGAAATCACAAACTTGAGTTTGCTAAGAACTAAGAAAAGAAACAATATATCTAGAATAGAATAAAAAACCCGAAGAACAAACACACAAAGAACTTCTAGGCTAAAACAAACCCACGAAGAGCGAAACGAAGAACTTCTGGGATAGAAACATAGATCCTCGTATAGAGATCTATAACAGAACCTAGGAAGAACGAAACAAGAACTCCGGGGCAAAATGAAAGAGCAAAACTGAAGCAAAGTAGAATCAAATCAGGATGAAATCGTGGTCTAAATTGGGCAGGAGCGTTTCGTCATCAGAATGGAACTGAACGAACTAAACTAAAGCAAGTCAGAATCAAACCGAACAGGAAATCTGGATGAACAGAACGAAAACTGAAGAGAGCTGAGAGGTTGAGTAGATAGAGAACTTTGCGGCGTTCTTCGCAAAAAGAGAAGATGCGTTTCATGACGGCGAGCTTCACAAATGGAGAGCGGACAAAGCCGAACCTGTGCGTCGTCGGCTGTGAGTGGAGCGGAGCGGTGGATCATGGATCTGAACAAAGATTCACCCTCTTCAGGATCGGGAGTCTTCAATCTAAAGAGATTGTCTGGTACGAGTAAAGGGCAGCGGCGGCAGGTCGGTCTGATCTTGAACAGTATGATTCGAAGGCGAAAGATGAAATAAAACACGGATTTGGAAGTCGAAGACACGAACAGAGATGCACGAACAAATCGGTGCTTGCAATGTGCGCACAAGTAGATCTAAGTGAGGACGAATGGAGAGCGGATATGGGTCGAGAGTGCGACGAACTGGGTCGAGAGTGCGACGAACTGTGTGGATGGAAGGAGCAGTGATGGCGGAAGGAGCAGTGATGGCAGAAGGAGTAGTGGCGGCGGCAGCAGAATCAGAGACGAGGATTTTGATCTAGGAGGCAGAGCGAATTACTTGGAGACATGATGTGTATTGATTACTGATGGGTATGGCTCTGCCTCCGTCGACGAATCAACGGAGGCAGACGTGCAGGGATGTGACGGCTAGAATACAAGGAGACTTAAAACCCTATAGCTCTGATACCATGTTGATTTTATGGAATCAATCTATATTTCATTCATTACTTAATAGAGATACAAGCCTATATATAACCATAGAGAAATACACTTAAGCAAATAATATCAAATAATATCTCCAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATATCTCCTAAGAATAATCTAATTATATTAATAAATGGGTCTCTTATACCAGCCTTCATTATTCTTTTTAAGTGAATGTGTTGTCCTTGGTTTTAGTCACCCTGATTTCTTCCTCCCACCCAGCTAGATCTCACATGAATTTTGACTCTGTTTTGCGTGGAGTACTCTTATGAATACTTTGCATGAATGTTTGAAGGCATTTGTATGATTCAGATGAGTTGGAAAAACCTGTTACTCTTTTCAATCCATAACAACTACAGGAAAGCTTGTCTAGCATTCCTCTCAAGGACTCTTCCTCCTCTGAAAACCACCAACTTGATAGAGTTTCCATGAGCAAGAGTCAAGACTGTAATGTCCCTTGGATAGCAGCAAGCTGTGCAACATTTAACCGTCATGGGTTGGTGTAGTAGTAAAAAAGGAGACATATTCTCAATAACTAACTAAGAGGTCATGGGCTCAATCCATGATGGCCACCTACCTAGGAATTAATTTTCTACGAGTTACCTTTGACACCCAAATGTTGTAGGGTTAGGCGGGTTCTCATGTGAGATTAGTCGAGGTGTGCATAAGCTGACCGGACTCAACATTTTTCCAAAGAAATTGTTGTAGTTGACATGCTGTTAATGTTAATTGATTAATTGATCAAGCTTGAAGAAAGGAGGGTCTAGCTTAGTATAATATACTCAAACTTCTTTGTTTTGTTTGTTTACAAATTATCCAAAGCTCATGCAAATGTTATTCAACTCTAACAAGTCATCAAGTATTTTCTGAGCTGTATGCCTGTAAGTAGGGTACTTCGGTATTGATCTGTCTAACCTTTGGGTTATTTGAATACTGGGTGTATGTGCTTTATCCAGATTTAACCTCAGTGTGCTTCCATGATGCAGGCAGACATGAATGTGAGGGACAAAGTTTTAGTGCTATTAGATTCTTGGCAGGAGGCATTTGGTGGACCTGGAGGGAAGCATCCTCAATATTACTGGGCGTATGATGAATTAAGGGTATGTGTTATAGTTGAGAACTGTCTATTTAATCTTTATGTGATTATCTGACCGTCAGCAATTTGGAAATCTTGTTAACAACAGACATTGTTTGGCTATTTTCATTGACATCCACAATTTATTGAAAAAATTCATGTTCATATTTTACATAATTAAAAACTTCCATTCATAATTTCATATATTTCGAACATTTTTAGAGTTTATTAATTGGATTTTTGTGTATACAGCGTTCTGGAATTGAATTTCCCAGGCGGTCATTAAATGCTGCTCCAATTTTTACACCACCTGTTTCAAATCCAACCTTAAGAATTACACAAGCTGGTTATGGAATGCCTAGCAATTCGTCAAGGAGGCTTGATGAGACAATGGCAACAGAAATTGAAGGCCTAAGTTTGTCAAGCTTGGATTCCATGCGTAATGTTATGGAGCTCTTGAATGACATGCTGCAAGCGATGACTCCTGGAGACTCCCTTGTATGTGCAACGATGTTTTCAGATGTATCACGCTTTTCTCAAGAAAAAAAGTTCTCACCCATCTCATCTCTACTTGTAGGCTGTTAAAGATGAAGTGATTGTAGATCTTGTCAGCCGTTGTCGTGCCAATCAAAAGAAGTTGATGCAGATGTTGACTACAACGGGGTTAGCTCCTTGAAATTGCTGTTGGCTTATGTTTGTAACCATCTATTTTCTTGTGTGTGCTTTCATTGTCTCTCTCTCTCTCGCAAACCCAGTAGGTCAAGACTTCTGTGGCAGATTGAAGCAGGAAATCTGTGATTCAAAACTTCAGAACCATGTGCTTTAGATTTGTTGTGAATGAATTTGAAATTGCTACATTTTGGGTTGTTCCAATTGTTCTGTAGCAATTGGTTGTGTTCTACAAGAGGTCCTGGAATTCTGTTTTTGAGTTTGTGTATGATGAATTTTTTTTCTGTGTTCTGTAGGGATGAAGAAATTCTTGGTCGAGGTCTGGAGCTAAATGATGGCTTGCAAACTTTACTTGCTAACCATGATGCAATTGCTTCTGGTTCTGTGTTGCCGACTCAATCGACAAATCAGAGCCCTCAGATGCCTGAGTCATCTGCTGCCACACAGAAAGCCAGCGAAGTAGGAGGTTCAAGCTTAAGAGATTCTAGTCCTTTATCAAATGCGAATAATACATCTTCGACTGCTTCCGTAGCAAAGAGCCAGATAGTGGAGGAAGACGAAGAGGAGGATGAGTTTGCACAACTAGCTCGAAGGTTAGTCAAGAATGTTGAGCAGGTTTTCATATTCTTCTATAATTTATGACGATAACAGACTTCAGCTATCTGTTCTTGGATGATCTTGAGATGTTGTTGTTAATTATTCAGATAAGATAACGCAGGCAAATAGATAATATTGGATGGTTTGCATTCTGATCTTTTTTTCCTTTTTGGCTGACTGTAAATGTTAAAACCATTCAAATTGCAGGCACTCTAAATCACAGCCTATACCTATTCAAAGCTCTTCTACTGAATCTGTTGATAACTTGGCATTGGTGAGCACAGGCAATACAGTTACTTCATCCACGCCACCATCATCTAATACTTGCACAGCATTAGCTCTGCCAGATCCTCCTGCACCAGTCAAGACTTCAAAAGAGCAAGATATGATTGACCTCTTGAGTATTACTTTATCAACATCATCAACCTCGCCTCATACTCCTCTCACTCCTCCTGCATCAAGCCAAAATACACATCAGGTCCCTGTGTCAGCGTCAAATACACAGGGATATCATCCTCACCATTCTGCAAGCCAAGGTCAGGTACCATATAACAGTTACGTTGTACCGTGGGCTCAACCTGGACCCCAAGTTCAGTTGCAATCACAAACCAAAACACAATCACCATCACCATCACCATCGCAGCAACAATTTCAAAGTCAGCCTCAGCCACATCCCCAACAACAATATCGGCCTCAGCCTCAGCCTCAGCCTCAGCGGCCACAACAACAATTTCAACCTCGGCCACAACAACAACAATATCAGCCACAGCAACAATTTCAATCTCAGCCCCAGTCACACCCGCAGCAGCAATATCATCCACAGTATGCTCAATATTCTTCAGGCTATTACCCTCCCCCACCTTGGGCAGGTTCTTCTCTTAATGCCAACCACCAAAGTAACGTCTCTGTTTCGAATATGGGTTATCTTCGTGGGAAGGAACCTGCACTGTCTACCTCATCATTGCCTGCTAGACCTTTGCAGCATCTTAATTCATTTCCTTCAAGAGGAAATAATGAGTTAGGTACGCATGGAGGAGGAGACTCATGGGCAGCAGGTGCCCCTAGGAACTCAACGCCTTCAACAACACAAAAGCCATTCATTCCATCATACAGACTGTTTGAGGATCTAAATGTTTTTGGCAGTACAGATCCAAGATTGAAGGTGACTAGCAGTAACGCAACCTCTAGCTTAGCCGGAAGTTCTGGTCAAAGTATGGTGGGTGGGAGAAAGTGAAAGTGAAAGTGAAAATAGCCTCCTCATTTATGTAGCTGAAGAAATTTCCCGTGTCAATATAAAAGTATCTTTTTCATCTTTGTGACGTATTTAAAACAGATTGGCAGAACATAGATTTCATGTGATCATTGATTATGGAATTGAAGAAAAAATGTGAGTTGTAAATTTTTGTTCTATTCGTAAATGGTCTCTACTTTGTCGTGCTTTTCGGGCAGTGCATGGAAGATGTAAAAACCCAACAGGACAACAATCTTTTGCTGATCCTGACATTCGACCATGGAGGTAATCTCTCTCTCTCTCTCTAGGTTTTCACTTTCTTCTACTTTGCTCTGTATCATATATATACTCAGTTTCAAGATCAAAAAATTAATGTCCAATTGATTAGCTTTCATGGTTGTATAATAATTACATTTTTACTACTTTTTCTTAATTTTTTCAACAAT ATGAATGTGAGGGACAAAGTTTTAGTGCTATTAGATTCTTGGCAGGAGGCATTTGGTGGACCTGGAGGGAAGCATCCTCAATATTACTGGGCGTATGATGAATTAAGGCGTTCTGGAATTGAATTTCCCAGGCGGTCATTAAATGCTGCTCCAATTTTTACACCACCTGTTTCAAATCCAACCTTAAGAATTACACAAGCTGGTTATGGAATGCCTAGCAATTCGTCAAGGAGGCTTGATGAGACAATGGCAACAGAAATTGAAGGCCTAAGTTTGTCAAGCTTGGATTCCATGCGTAATGTTATGGAGCTCTTGAATGACATGCTGCAAGCGATGACTCCTGGAGACTCCCTTGCTGTTAAAGATGAAGTGATTGTAGATCTTGTCAGCCGTTGTCGTGCCAATCAAAAGAAGTTGATGCAGATGTTGACTACAACGGGGTTAGCTCCTTGA MNVRDKVLVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGIEFPRRSLNAAPIFTPPVSNPTLRITQAGYGMPSNSSRRLDETMATEIEGLSLSSLDSMRNVMELLNDMLQAMTPGDSLAVKDEVIVDLVSRCRANQKKLMQMLTTTGLAP Homology
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: O80910 (TOM1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=TOL6 PE=1 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 2.5e-56 Identity = 115/189 (60.85%), Postives = 132/189 (69.84%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: F4KAU9 (TOM1-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=TOL7 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 3.8e-41 Identity = 86/144 (59.72%), Postives = 107/144 (74.31%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: Q9LPL6 (TOM1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOL3 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27 Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: Q8L860 (TOM1-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=TOL9 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 9.2e-27 Identity = 61/151 (40.40%), Postives = 96/151 (63.58%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy Swiss-Prot
Match: Q6NQK0 (TOM1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=TOL4 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.7e-26 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_031739491.1 (TOM1-like protein 6 isoform X2 [Cucumis sativus]) HSP 1 Score: 294 bits (753), Expect = 7.85e-94 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: KAA0044214.1 (TOM1-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 292 bits (747), Expect = 1.55e-93 Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_004137684.1 (TOM1-like protein 6 isoform X1 [Cucumis sativus] >KGN58706.1 hypothetical protein Csa_002173 [Cucumis sativus]) HSP 1 Score: 294 bits (753), Expect = 2.31e-93 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_008442341.1 (PREDICTED: TOM1-like protein 2 [Cucumis melo] >TYK24921.1 TOM1-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 292 bits (747), Expect = 1.80e-92 Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. NCBI nr
Match: XP_038903948.1 (TOM1-like protein 6 isoform X3 [Benincasa hispida]) HSP 1 Score: 287 bits (735), Expect = 2.42e-91 Identity = 142/147 (96.60%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A5A7TLZ9 (TOM1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005740 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 7.48e-94 Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A0A0LF51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730700 PE=3 SV=1) HSP 1 Score: 294 bits (753), Expect = 1.12e-93 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A5D3DMT3 (TOM1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00350 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 8.72e-93 Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A1S3B683 (TOM1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103486241 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 8.72e-93 Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G12179.T5 vs. ExPASy TrEMBL
Match: A0A6J1DSN9 (TOM1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111024025 PE=3 SV=1) HSP 1 Score: 276 bits (707), Expect = 3.36e-87 Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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