Cp4.1LG09g05060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g05060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pre-mRNA-processing factor 17-like
Location	Cp4.1LG09: 3338145 .. 3339887 (-)
RNA-Seq Expression	Cp4.1LG09g05060
Synteny	Cp4.1LG09g05060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGATGGAAGCCCTAAACAGCTTACATCTTCACCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTCGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTTGGCTTTGTTGAGGATGCGTCCATTGAGCCATTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAGTACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACAAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCGGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTTGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAA

mRNA sequence

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGATGGAAGCCCTAAACAGCTTACATCTTCACCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTCGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTTGGCTTTGTTGAGGATGCGTCCATTGAGCCATTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAGTACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACAAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCGGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTTGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAA

Coding sequence (CDS)

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGATGGAAGCCCTAAACAGCTTACATCTTCACCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTCGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTTGGCTTTGTTGAGGATGCGTCCATTGAGCCATTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAGTACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACAAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCGGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTTGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAA

Protein sequence

MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKPIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW

Homology

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BLAST of Cp4.1LG09g05060 vs. ExPASy Swiss-Prot
Match: O60508 (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 5.5e-152
Identity = 281/574 (48.95%), Postives = 372/574 (64.81%), Query Frame = 0


Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA---SAG 139
           P  GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDNPASDVW 199
             +IG +E  +KN  ++V+     E  ++K EK+K+  E              N AS++ 
Sbjct: 160 AKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKE--------------NDASNI- 219

Query: 200 LMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGEKGEVTADKSTFHGK 259
                  PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H K
Sbjct: 220 --DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVK 279

Query: 260 EERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLI 319
           E  DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP  GHL+
Sbjct: 280 EMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLL 339

Query: 320 LSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETG 379
           LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETG
Sbjct: 340 LSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETG 399

Query: 380 QVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTI 439
           Q IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI
Sbjct: 400 QCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTI 459

Query: 440 TFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQ 499
            FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQ
Sbjct: 460 VFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQ 519

Query: 500 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFR 559
           ILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++ 
Sbjct: 520 ILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS 578

Query: 560 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
             K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 580 RFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

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BLAST of Cp4.1LG09g05060 vs. ExPASy Swiss-Prot
Match: Q9DC48 (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 7.1e-152
Identity = 270/533 (50.66%), Postives = 357/533 (66.98%), Query Frame = 0


Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP  GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSA---SAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESE 180
           TF  YGYA DPS         +IG +E  +KN  ++V+     E  ++K EK+K+  E  
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKE-- 191

Query: 181 DVEMELNPAEVDNPASDVWLMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGE 240
                       N AS++        PW+    ++ +     EEQK+  E  AK  KKG+
Sbjct: 192 ------------NDASNI---DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK 251

Query: 241 EKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWS 300
           ++  + GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WS
Sbjct: 252 QEEEKPGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWS 311

Query: 301 GHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGS 360
           GHTKGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G+
Sbjct: 312 GHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGT 371

Query: 361 KFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 420
           +FL+A YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+
Sbjct: 372 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 431

Query: 421 NTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMP 480
            +G+I QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP
Sbjct: 432 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP 491

Query: 481 SISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 540
           ++++ PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+S
Sbjct: 492 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVIS 551

Query: 541 GDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           GDG GK   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 552 GDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy Swiss-Prot
Match: O43071 (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 6.8e-102
Identity = 220/596 (36.91%), Postives = 316/596 (53.02%), Query Frame = 0


Query: 14  DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTM---LALTVANANRTLSKPIDPTQHLVAF 73
           D   ++ + SP   P  LL ++  AP V D +   L ++    +R L++           
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVDNVKDDLIVSKGGNSRELAR----------- 68

Query: 74  NPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAAD 133
           N   +++  P LGP++P+        ++N   G+ E   +  FVF+++        Y A+
Sbjct: 69  NVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQE--------YYAN 128

Query: 134 PSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDN 193
             A  G     D EA    D             KRK +K KE  E        +P+ ++ 
Sbjct: 129 THAIYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPG-----DPSILEG 188

Query: 194 PASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEV-------- 253
             +        K PW+G     Q+    E  +Y E  +     EK  E   +        
Sbjct: 189 DGA-------YKGPWAGYGSE-QSSSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKE 248

Query: 254 ---TADKSTFHGKEER--------DYQGRSWIAPPKDA------KATNDHCYIPKRLVHT 313
              T +  T   KEE         DYQ RS++  P D       +     CYIPK+ + T
Sbjct: 249 QLATPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFT 308

Query: 314 WSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCND 373
           W GHTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  D
Sbjct: 309 WKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQD 368

Query: 374 GSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 433
           G  FL+  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+
Sbjct: 369 GRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQF 428

Query: 434 DMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHS 493
           D+ +  I Q YD HLG +N+ITF++N +RFVT+SDD S+R WEYG PV IK++++  MHS
Sbjct: 429 DIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHS 488

Query: 494 MPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 553
           MP +++ PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV
Sbjct: 489 MPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFV 548

Query: 554 MSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYW 581
            SGD  G   FWDWKTCK+   L  H G      +HP E SKVAT    DG IKYW
Sbjct: 549 FSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYW 557

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy Swiss-Prot
Match: P40968 (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 7.3e-72
Identity = 145/458 (31.66%), Postives = 246/458 (53.71%), Query Frame = 0


Query: 130 DPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVD 189
           D S+ +  NF       +K +  +++    +E     I K+K      +++      + D
Sbjct: 8   DTSSDSDLNFDEGKSVHEKKNG-NLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGD 67

Query: 190 NPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTF 249
            P    W        WS   +   ++ +E QK+  + +     E+    +     + S F
Sbjct: 68  GP----W------GSWSSSDDE-TSQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHF 127

Query: 250 HGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHG 309
           +GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK G
Sbjct: 128 YGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTG 187

Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDT 369
           HLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++ +D+ +K WDT
Sbjct: 188 HLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDT 247

Query: 370 ETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHL 429
           ETG+V +       P  V+  P +  +   + G+S+ KI+ +D    +   + Q YD HL
Sbjct: 248 ETGKVKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHL 307

Query: 430 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 489
            ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  A
Sbjct: 308 SSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCA 367

Query: 490 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 549
           QS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW 
Sbjct: 368 QSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWN 427

Query: 550 TCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLI 578
           T ++   +K      I   +WHP E SKV   G  G I
Sbjct: 428 TSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKI 451

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy Swiss-Prot
Match: E9Q349 (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.9e-44
Identity = 94/313 (30.03%), Postives = 165/313 (52.72%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           ++     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]

BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: XP_023541873.1 (pre-mRNA-processing factor 17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1202 bits (3110), Expect = 0.0
Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: XP_023541872.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6573743.1 Pre-mRNA-processing factor 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1202 bits (3110), Expect = 0.0
Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: XP_022966828.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1201 bits (3107), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           M+LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: XP_022966830.1 (pre-mRNA-processing factor 17-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1201 bits (3107), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           M+LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: XP_022945494.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1199 bits (3102), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 579/580 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA RTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy TrEMBL
Match: A0A6J1HSN8 (pre-mRNA-processing factor 17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466417 PE=4 SV=1)

HSP 1 Score: 1201 bits (3107), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           M+LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy TrEMBL
Match: A0A6J1HTD1 (pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466417 PE=4 SV=1)

HSP 1 Score: 1201 bits (3107), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           M+LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy TrEMBL
Match: A0A6J1G135 (pre-mRNA-processing factor 17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449712 PE=4 SV=1)

HSP 1 Score: 1199 bits (3102), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 579/580 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA RTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy TrEMBL
Match: A0A6J1G146 (pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449712 PE=4 SV=1)

HSP 1 Score: 1199 bits (3102), Expect = 0.0
Identity = 579/580 (99.83%), Postives = 579/580 (99.83%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA RTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. ExPASy TrEMBL
Match: A0A5D3CVQ9 (Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00990 PE=4 SV=1)

HSP 1 Score: 1187 bits (3071), Expect = 0.0
Identity = 570/580 (98.28%), Postives = 578/580 (99.66%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]

BLAST of Cp4.1LG09g05060 vs. TAIR 10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 988.4 bits (2554), Expect = 2.4e-288
Identity = 473/582 (81.27%), Postives = 522/582 (89.69%), Query Frame = 0


Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDL+QSY ++++       + SSPE+SPPR+L +K+SAP+VDDT LALTVAN N++ SKP
Sbjct: 1   MDLIQSYEEEDE------AVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP+ GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHK GYAADPS   G N++GD+EA +KND +SV+NIPQ EQK+RKIE+ KE  E E+ +
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGE--EKGGE 240
            E+ P E +NP ++ WL KNRKSPWS KKE +Q ELTEEQKKYAE++AKKK E  ++G  
Sbjct: 181 EEIEP-EAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGET 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTAGYDK I
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NTG++TQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           WK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 572

[Close]

BLAST of Cp4.1LG09g05060 vs. TAIR 10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 206.5 bits (524), Expect = 6.0e-53
Identity = 102/308 (33.12%), Postives = 167/308 (54.22%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 397
           V+D+ +   G   L+ GYD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 398 MSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEY 457
            S   +  WD+   +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

[Close]

BLAST of Cp4.1LG09g05060 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 1.0e-28
Identity = 73/302 (24.17%), Postives = 141/302 (46.69%), Query Frame = 0


Query: 285 TWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFN----SGKCMRTYMGHSQAVRDI 344
           T + H + VS+++ F   G L+ SA  D  ++ + +        + ++ + GH   + D+
Sbjct: 19  TLTSHNRAVSSVK-FSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 78

Query: 345 SFCNDGSKFLTAGYDKKIKYWDTETGQVIST-FSTGKIPYVVKLNPDDDKQNILLAGMSD 404
           +F +D    ++A  DK +K WD ETG +I T        + V  NP   + N++++G  D
Sbjct: 79  AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP---QSNMIVSGSFD 138

Query: 405 KKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYIS 464
           + +  WD+ TG+  +    H   V  + F  +    V+SS D   R+W+ G    +K + 
Sbjct: 139 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 198

Query: 465 EPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 524
           +     +  +   PN  ++   +LDN + +++      L   K + GH+ A Y     FS
Sbjct: 199 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTYTGHVNAQYCISSAFS 258

Query: 525 -PDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 581
             +G+ ++SG  +     W+  + K+ + L+ H    +    HP E + +A+   D  ++
Sbjct: 259 VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE-NLIASGSLDKTVR 312

[Close]

BLAST of Cp4.1LG09g05060 vs. TAIR 10
Match: AT5G64730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-26
Identity = 83/309 (26.86%), Postives = 143/309 (46.28%), Query Frame = 0


Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAV 337
           +P +  H   GH   V A R F   G+  L+ G D  +++W+  + G  ++TY  H + V
Sbjct: 6   LPTKEAHILKGHEGAVLAAR-FNGDGNYALTCGKDRTIRLWNP-HRGILIKTYKSHGREV 65

Query: 338 RDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTF--STGKIPYVVKLNPDDDKQNILLA 397
           RD+   +D +KF + G D+++ YWD  TG+VI  F    G++   VK N   D  +++++
Sbjct: 66  RDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEV-NAVKFN---DSSSVVVS 125

Query: 398 GMSDKKIVQWDMNTGQI--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPV 457
              D+ +  WD  +  +   Q  D  L  V ++  V      +  S D ++R ++  I  
Sbjct: 126 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV--VLTKTEIIGGSVDGTVRTFDMRIG- 185

Query: 458 VIKYISEPHMHSMPSISVHPNTNWLAAQSLDN--QILIYSTRERFQLNKKKRFAGHIVAG 517
             + +S+     +  IS+  + N + A  LD+  ++L  +T E  Q+ K     GHI   
Sbjct: 186 --REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK-----GHISKS 245

Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
           +      +     V+ G  +G  +FWD    KV    + H+ V     +HP E   + T 
Sbjct: 246 FKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC-MLTS 297

Query: 578 GWDGLIKYW 581
             DG I+ W
Sbjct: 306 SVDGTIRVW 297

[Close]

BLAST of Cp4.1LG09g05060 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-25
Identity = 74/291 (25.43%), Postives = 127/291 (43.64%), Query Frame = 0


Query: 287 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 346
           SGH   V  ++F P  G LI S   D ++ +W V    K      GH  A+ D+ + +DG
Sbjct: 50  SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 109

Query: 347 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 406
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 110 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 169

Query: 407 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSM 466
           M      Q +      +  ++F D   +  T   D  ++VW+         + E H  ++
Sbjct: 170 MRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTI 229

Query: 467 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 526
             +S+ P+ ++L    +DN++ ++  R     N+  K F G  H       + ++SPDG 
Sbjct: 230 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 289

Query: 527 FVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 575
            V +G  +     WD  + +    L  H G    C +HP E   + +C  D
Sbjct: 290 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O60508	5.5e-152	48.95	Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1	[more]
Q9DC48	7.1e-152	50.66	Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1	[more]
O43071	6.8e-102	36.91	Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P40968	7.3e-72	31.66	Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]
E9Q349	4.9e-44	30.03	WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1	[more]

BLAST of Cp4.1LG09g05060 vs. NCBI nr


Match Name	Identity	Description
XP_023541873.1	100.00	pre-mRNA-processing factor 17-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023541872.1	100.00	pre-mRNA-processing factor 17-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6...	[more]
XP_022966828.1	99.83	pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima]	[more]
XP_022966830.1	99.83	pre-mRNA-processing factor 17-like isoform X2 [Cucurbita maxima]	[more]
XP_022945494.1	99.83	pre-mRNA-processing factor 17-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG09g05060 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1HSN8	99.83	pre-mRNA-processing factor 17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HTD1	99.83	pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G135	99.83	pre-mRNA-processing factor 17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1G146	99.83	pre-mRNA-processing factor 17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3CVQ9	98.28	Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Cp4.1LG09g05060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10580.1	2.4e-288	81.27	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G54520.1	6.0e-53	33.12	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.0e-28	24.17	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G64730.1	2.8e-26	26.86	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G43770.1	1.1e-25	25.43	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 209..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 286..320 score: 10.706503
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 416..448 score: 10.495596
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 330..367 score: 11.5765
None	No IPR available	CDD	cd00200	WD40	coord: 282..580 e-value: 5.46127E-69 score: 222.981
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 306..320 score: 33.9 coord: 349..363 score: 29.88 coord: 435..449 score: 29.46
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 409..448 e-value: 2.6E-6 score: 37.0 coord: 541..580 e-value: 1.2 score: 16.5 coord: 497..538 e-value: 0.14 score: 21.2 coord: 323..362 e-value: 4.4E-10 score: 49.5 coord: 365..406 e-value: 3.6 score: 13.5 coord: 452..491 e-value: 10.0 score: 10.6 coord: 279..319 e-value: 6.9E-9 score: 45.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 410..447 e-value: 0.0013 score: 19.5 coord: 281..319 e-value: 4.7E-6 score: 27.2 coord: 503..538 e-value: 0.029 score: 15.2 coord: 324..362 e-value: 4.9E-6 score: 27.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 330..371 score: 15.420926
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 286..320 score: 12.881143
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 416..448 score: 12.613797
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 266..580 e-value: 4.6E-96 score: 323.6
IPR032847	Pre-mRNA-processing factor 17	PANTHER	PTHR43979	PRE-MRNA-PROCESSING FACTOR 17	coord: 41..580
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 306..320
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 277..580

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05060.1	Cp4.1LG09g05060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding