Cp4.1LG08g06940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATCAGTATAGTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCTAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTCGCACAAAACGCAGGTTCATCTGAGACTCTCTCAATTTCTTTTTTTCCCTCTCTCGCTGTTTTTCGATTTCTTCTGAATTCATATGGAGGTCTTCTTTTTCTTTGCAGATAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTAGGTAACTTTATTGTTGATTTTCTTCGTTTTAGCATATATTGAATGATAGGTATTAGTAAGATTATTTGTTTATTAACTAATTTTTTCCTTGAATCAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGGTACATACTTTTAGATTCATTTGTTTACTTTTAGATTCATTTGTTTACGTTGAAGACTATTGGGAGGGAGTTGAAGACTATTGGGAGGGAGTCCACATTGGCTAATTTAGGGAATGATCATGAGTTTATAGGTAAGGAATACATCTCCATTGGTATAAGGCCTTTTGGGGAGGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGGGACTAGTTATTCCTAACCATTCGAAACCTGGACACGAGCTTAGCATTTTTAGTGCATTGACTTTTTGATATGAACCAAGAGACATCATTCATACAATATACTTCAATGAAGATGTGAAGAAGAAAATGTTGTCAAAATTATCAAAAGAGGTTGCAATTCATCTCACATTAATGAAGTTTGATGGTTATAAATTTTGGGTGGGTTACAATTTAGAGTAATTTAGAGTTATTGTATTTTAAGACATTTTATTTACATCTTCATAATATTGTATGAATGATGTCTCTTGGTTCATATCACTTTTAGCAGGCTAAATGCTGCTAAATGCAGACATGGATATGTTATTCTCTGTCAAGAAAAAGGTGTCCTGGAAATTTAGCATCCACCCATTAAATCCTTGTTTCAACAGTCGTCCCTAGTTTGTGTTTAATTTCGTCTAGATTGTAAAGTCTATGAAAGATTAGGTTAGTCAAAGAGTACAATTTTTTACCAAGGATCCTCTTCCCAAAAGATGGTTATGAAATTTATTGTAAAATAAGAAATGTGCTTGTTGCAAGATCTATGGAGGGACATCTGTGCCTGATGGATGGATGGTAATTACTCACTAGTTGGTACCCAATCTTGGTTGTCTCGTAGGCTGGAAATATATTGGTTTTATAGTGCAAAAGTTGTTAACATTGATGAAATGGATTTTGAGTTGCACGTTTAAAAGAATGTAGCAATATAATGTAGTTGGGTGTAACATAGAGTGGTTGGAGAATTACTGACTATGTAACATTGTAGCATTGTTACTAAATATTTCTAACTTATAGCATTATTATGAGATGAAATGTAGAGATTGTTTGTAGCACTGTTTCGAACAATTTAACACCATGCACTTCAGCTGGGAACTTACCTCCCCCTTTTATGTCATTTGAAGTAGGCAAATTACTTCCTGACTACTACATTTAGAACATAGAACATGTCTGCATTATATTTGAATATGTTACAGTGCTTGTTCCTTCTTTGGAGTTGCAAGCGTTGCTCACTTCCTTCACTTGTTGCAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCGGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGTTTGCATGTTGACCAATTACCACCTAAATTTGAATCTGAACACAAACAACTTTAGTAGTTCTTGACCTATACATTCTTGTTAATTGTCATAGGATGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGTAAGTCACTCTTCCTTGTAATTACGTGGTTGTGGATGTGGGAGCTTGGTTTTTCATTGTTCATAATGTCATAATTTGATTTAAACAGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTCCATTGAATTGTAGTAGGAGTAGTAGTAGTAGTGAATCAGAGTCTGAAGAGAATAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAATAAGAATACCGACCGTGGGAATAGATTGTCAGTTAAACTGAAAAGATCGAAGTCTAGAAAAACCAATAATAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAAAAAGCGACCGAGGATTCTAGAGCTTTCTTAAGAGCCATCTTTTGATCGCATCGGATTCGTGAATATGGATGTGTCGCTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACAAAATCTTCAAGGTTGATTTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCACCTTTATCTTTAGTTCATGTGCTTTCTTTGGAAGGGAAGGCGCTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGAATTATTCTTAGTCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCCTTTTCTTTCTTTCACCCGTTCTTATATGTTGTCATGCTTTCTAAGGAGAAATTCACTGGTTTTGCCAGAGATTATGCTC CAAATCAGTATAGTCTCCCAAACCAATTTCTCGGCTCTACTTAAGCCTATCGCCGGTCGGCATAGCAGTTTATCGGCGACGCCTCCTCAGTTTTCCTCACAGTCGCCGGGAAGAGCTGCCAGCCGCCGCTAGTGGTCGCTGTCCGCCCTTTGCTGTTTGCTCTGTAGCTATCTCTTTCTCGCACAAAACGCAGATAGAAGACGCGAAAGATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCGGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGATGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTCCATTGAATTGTAGTAGGAGTAGTAGTAGTAGTGAATCAGAGTCTGAAGAGAATAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAATAAGAATACCGACCGTGGGAATAGATTGTCAGTTAAACTGAAAAGATCGAAGTCTAGAAAAACCAATAATAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAAAAAGCGACCGAGGATTCTAGAGCTTTCTTAAGAGCCATCTTTTGATCGCATCGGATTCGTGAATATGGATGTGTCGCTATGTTTGAAAGTATATGAAGTTTCTGATGCTTGCACTGACAAAATCTTCAAGGTTGATTTGCCTGCCTAGTCCTTTAAGCTTTTGGGTAGGAAGCGATTTTGCTCAAGCTATTTCTTTCTTCACCTTTATCTTTAGTTCATGTGCTTTCTTTGGAAGGGAAGGCGCTGTCTTTATGCATTTCTCTTATAGGAACTGGAATATAGTTAAGTTGGAATTATTCTTAGTCAGATTACCAATGTTGGTTTGTATACATGATGTCGAACTTCAATACTTCAGAAATAGCCAAATTAAGATATTTTTTGTTCTATTTGGCCCCTCCTTTTCTTTCTTTCACCCGTTCTTATATGTTGTCATGCTTTCTAAGGAGAAATTCACTGGTTTTGCCAGAGATTATGCTC ATGCGGCATGCTAGCAAGGATCTTTTGTGTTTGGAGCGGAAAGATTTGCCCTCTTCGTCTTTAGAATCCTCACTGCTAGTTTGTAAAAAGAACTCAACGTCCAAGGAACCCTGTCGGAATGAAAAACCCATTACAGAACCAGCTCCAAAAAGCCAAGTATTGGGAAGAGTCAAAGACTTCTTAGGAGTATTATCGGAAGCTAATAAAAAGCTGCAATTGGATGCAAAGGATGATGCTGAAAAATATGATATTGAAGCCCTTAATGGCGATGAATCAGAAGTCATTGAATTGGATCTGATGTTGGGCATTGCTGATCTTCATACTCCTGAAGCTGTGGCTGCTGCTGAATCTGCAATAATTGGTAATCAGCCTGTGATTCCATTGAATTGTAGTAGGAGTAGTAGTAGTAGTGAATCAGAGTCTGAAGAGAATAGTGATGATAGCATTACAAGTGACAACAATGACGATGATAATGAAAAGAGTGACAATAAGAATACCGACCGTGGGAATAGATTGTCAGTTAAACTGAAAAGATCGAAGTCTAGAAAAACCAATAATAGAAGTGAAAGCAAAGAAAAAGGTAAATCAAAAAAGCGACCGAGGATTCTAGAGCTTTCTTAA MRHASKDLLCLERKDLPSSSLESSLLVCKKNSTSKEPCRNEKPITEPAPKSQVLGRVKDFLGVLSEANKKLQLDAKDDAEKYDIEALNGDESEVIELDLMLGIADLHTPEAVAAAESAIIGNQPVIPLNCSRSSSSSESESEENSDDSITSDNNDDDNEKSDNKNTDRGNRLSVKLKRSKSRKTNNRSESKEKGKSKKRPRILELS Homology
BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: XP_023539679.1 (uncharacterized protein LOC111800292 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365 bits (937), Expect = 1.53e-126 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: XP_023005549.1 (uncharacterized protein LOC111498503 isoform X1 [Cucurbita maxima]) HSP 1 Score: 342 bits (878), Expect = 1.50e-117 Identity = 194/206 (94.17%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: XP_022936657.1 (uncharacterized protein LOC111443185 isoform X1 [Cucurbita moschata]) HSP 1 Score: 340 bits (872), Expect = 1.19e-116 Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: KAG6596894.1 (hypothetical protein SDJN03_10074, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 325 bits (834), Expect = 6.12e-111 Identity = 186/193 (96.37%), Postives = 191/193 (98.96%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. NCBI nr
Match: XP_038903017.1 (uncharacterized protein LOC120089721 [Benincasa hispida] >XP_038903019.1 uncharacterized protein LOC120089721 [Benincasa hispida]) HSP 1 Score: 286 bits (732), Expect = 2.24e-95 Identity = 173/206 (83.98%), Postives = 189/206 (91.75%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. ExPASy TrEMBL
Match: A0A6J1KZJ8 (uncharacterized protein LOC111498503 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498503 PE=4 SV=1) HSP 1 Score: 342 bits (878), Expect = 7.24e-118 Identity = 194/206 (94.17%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. ExPASy TrEMBL
Match: A0A6J1F913 (uncharacterized protein LOC111443185 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443185 PE=4 SV=1) HSP 1 Score: 340 bits (872), Expect = 5.74e-117 Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. ExPASy TrEMBL
Match: A0A5D3CJH5 (E3 ubiquitin-protein ligase RNF34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00670 PE=4 SV=1) HSP 1 Score: 283 bits (724), Expect = 1.79e-94 Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. ExPASy TrEMBL
Match: A0A1S3BJW4 (uncharacterized protein LOC103490838 OS=Cucumis melo OX=3656 GN=LOC103490838 PE=4 SV=1) HSP 1 Score: 283 bits (724), Expect = 1.79e-94 Identity = 167/206 (81.07%), Postives = 188/206 (91.26%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. ExPASy TrEMBL
Match: A0A0A0L448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017130 PE=4 SV=1) HSP 1 Score: 280 bits (717), Expect = 2.08e-93 Identity = 167/206 (81.07%), Postives = 185/206 (89.81%), Query Frame = 0
BLAST of Cp4.1LG08g06940 vs. TAIR 10
Match: AT1G71430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 109.4 bits (272), Expect = 3.5e-24 Identity = 75/147 (51.02%), Postives = 97/147 (65.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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