Cp4.1LG02g08030.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCCAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCTCCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCCAACAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAACACTTCTTTCAGTCCCTAACATCCACCCTTCGATGA ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCCAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCTCCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCCAACAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAACACTTCTTTCAGTCCCTAACATCCACCCTTCGATGA ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCCAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCTCCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCCAACAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAACACTTCTTTCAGTCCCTAACATCCACCCTTCGATGA MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR Homology
BLAST of Cp4.1LG02g08030.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.1e-37 Identity = 75/104 (72.12%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 6.9e-29 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 4.9e-27 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.7e-17 Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.0e-16 Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. NCBI nr
Match: XP_022941161.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022980903.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_023525369.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217 bits (552), Expect = 4.01e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. NCBI nr
Match: KAG6608586.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 215 bits (548), Expect = 1.63e-70 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. NCBI nr
Match: XP_022937029.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_022975872.1 auxin-responsive protein SAUR50-like [Cucurbita maxima] >KAG6591277.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (466), Expect = 5.12e-58 Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. NCBI nr
Match: XP_023535895.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182 bits (461), Expect = 2.97e-57 Identity = 88/101 (87.13%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. NCBI nr
Match: XP_010104433.1 (auxin-responsive protein SAUR50 [Morus notabilis] >EXC00966.1 hypothetical protein L484_016032 [Morus notabilis]) HSP 1 Score: 179 bits (455), Expect = 2.52e-56 Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy TrEMBL
Match: A0A6J1J0M7 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111480219 PE=3 SV=1) HSP 1 Score: 217 bits (552), Expect = 1.94e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy TrEMBL
Match: A0A6J1FKC5 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111446542 PE=3 SV=1) HSP 1 Score: 217 bits (552), Expect = 1.94e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy TrEMBL
Match: A0A6J1IE85 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111476445 PE=3 SV=1) HSP 1 Score: 184 bits (466), Expect = 2.48e-58 Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy TrEMBL
Match: A0A6J1F9Z6 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111443449 PE=3 SV=1) HSP 1 Score: 184 bits (466), Expect = 2.48e-58 Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. ExPASy TrEMBL
Match: W9RZ83 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016032 PE=3 SV=1) HSP 1 Score: 179 bits (455), Expect = 1.22e-56 Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 155.6 bits (392), Expect = 2.2e-38 Identity = 75/104 (72.12%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 155.2 bits (391), Expect = 2.9e-38 Identity = 74/108 (68.52%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37 Identity = 76/106 (71.70%), Postives = 92/106 (86.79%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 151.8 bits (382), Expect = 3.2e-37 Identity = 72/104 (69.23%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of Cp4.1LG02g08030.1 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 147.5 bits (371), Expect = 6.0e-36 Identity = 72/105 (68.57%), Postives = 87/105 (82.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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