Cp4.1LG01g13130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATGGGTTTGATACTCATGGCCATGCTTTGCTGTGTTTCTCTATTGATTCTCTCGGTACCTTTTGCTTCCTCGCATGCTCTTGACCAGTCTTCTCCCTTGCAAGGTGTGTATACTCAGTCATGTCTCTCTCCTTCTTCTACACTTTGTTCTTTGTTCTTCTCTCTGAGAATAATGGAGTTATTTGTGATCTTGCAGTAACTGAAGCAGCAGTGCATTCTCCTCGTCTCGTTTTGTCAAGGAAGTTCAAAATGTTGGAAGAAGCGAAGGTTTGTTTGAGAATGCTTTTGAAATAAGTTATAAAAGAACATTACGAACATAATCATAGAGCCGGTTTGGAATGACTTTTCTAATTCGTAAAACGATTTTTGAACTAAGTTTTTCATTGTTAATGTCCAACTGTTCTAAACCATCTGGGCATTGTTCTATCTGTGTTCTTTCTCTGCTGTTGAAGTTGTGATATACATCACTGATGATTTTACTGGAAACAGGTTGTTGAAGCTCACGGATTCCAAGCTTCCAAACAAGAAGATGAGCTGAAGGAAAATGTTTCAGGTATGCAATTTCAAAGAAAACCCAAAAGTATGCAGGTTCTTAAATAACTCATTCCTGTCATATCTGTAAATCTTGCCAGTTCTTTGACTAAAAACTGCTGCAACATTGCTTCCTTGAAGATGGAAAATTTGTGGGCTTGCCATTTTTGAGTAACAATACATTAAATAAATGTACTTTCTTTTTCACATTTTTGATACATATCTTCACTTTCAGATATTTTTCCTGCCATTTTTGTTCTCAAATCACTTCCTGAATATCATTTGTTTTGATTAGTTGGCCTTTTACTTTAGTCATTCGTTCATCGTGTTCGTCCCATCAATAAGCGGTGTAATAAGTACATTTTAATTATCGTTCATTATGTTGTCATATCAATAAGCGGTCAGAGTTTGTAGATTGAATTTCTGTCTAAAATGAGTACATGTCAATTATCGTTCATCGTGTTGGAAGTGAATATTTGGTAATATTTTTTAATGAATGCATTTGAGATATGGTATTAATTTAATCGTCATATTTACAGGTCAGGCTTATAAAAGGGAGGAAAACAAAGGGAAGGGGAGAAAGTGGGGGAATGTGGACGACATGTCGTCGCGGTTTTTCACAATGGACTACGCTCACATAAAACGGCGCCGTCCCGTACATAACATGTCTCGCCAACGTCCT ATATGGGTTTGATACTCATGGCCATGCTTTGCTGTGTTTCTCTATTGATTCTCTCGGTACCTTTTGCTTCCTCGCATGCTCTTGACCAGTCTTCTCCCTTGCAAGTAACTGAAGCAGCAGTGCATTCTCCTCGTCTCGTTTTGTCAAGGAAGTTCAAAATGTTGGAAGAAGCGAAGGTTGTTGAAGCTCACGGATTCCAAGCTTCCAAACAAGAAGATGAGCTGAAGGAAAATGTTTCAGGTCAGGCTTATAAAAGGGAGGAAAACAAAGGGAAGGGGAGAAAGTGGGGGAATGTGGACGACATGTCGTCGCGGTTTTTCACAATGGACTACGCTCACATAAAACGGCGCCGTCCCGTACATAACATGTCTCGCCAACGTCCT ATGGGTTTGATACTCATGGCCATGCTTTGCTGTGTTTCTCTATTGATTCTCTCGGTACCTTTTGCTTCCTCGCATGCTCTTGACCAGTCTTCTCCCTTGCAAGTAACTGAAGCAGCAGTGCATTCTCCTCGTCTCGTTTTGTCAAGGAAGTTCAAAATGTTGGAAGAAGCGAAGGTTGTTGAAGCTCACGGATTCCAAGCTTCCAAACAAGAAGATGAGCTGAAGGAAAATGTTTCAGGTCAGGCTTATAAAAGGGAGGAAAACAAAGGGAAGGGGAGAAAGTGGGGGAATGTGGACGACATGTCGTCGCGGTTTTTCACAATGGACTACGCTCACATAAAACGGCGCCGTCCCGTACATAACATGTCTCGCCAACGTCCT MGLILMAMLCCVSLLILSVPFASSHALDQSSPLQVTEAAVHSPRLVLSRKFKMLEEAKVVEAHGFQASKQEDELKENVSGQAYKREENKGKGRKWGNVDDMSSRFFTMDYAHIKRRRPVHNMSRQRP Homology
BLAST of Cp4.1LG01g13130 vs. NCBI nr
Match: XP_023525366.1 (uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 239 bits (611), Expect = 2.04e-79 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. NCBI nr
Match: XP_022956442.1 (uncharacterized protein LOC111458171 [Cucurbita moschata] >KAG7032145.1 hypothetical protein SDJN02_06188 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224 bits (571), Expect = 2.48e-73 Identity = 122/127 (96.06%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. NCBI nr
Match: XP_022977309.1 (uncharacterized protein LOC111477668 [Cucurbita maxima]) HSP 1 Score: 220 bits (560), Expect = 1.18e-71 Identity = 120/127 (94.49%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. NCBI nr
Match: KAG6601362.1 (hypothetical protein SDJN03_06595, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209 bits (533), Expect = 1.23e-67 Identity = 113/120 (94.17%), Postives = 114/120 (95.00%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. NCBI nr
Match: KAA0034486.1 (putative root meristem growth factor 8 [Cucumis melo var. makuwa] >TYK09040.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]) HSP 1 Score: 155 bits (392), Expect = 5.46e-46 Identity = 94/132 (71.21%), Postives = 104/132 (78.79%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. ExPASy TrEMBL
Match: A0A6J1GWC1 (uncharacterized protein LOC111458171 OS=Cucurbita moschata OX=3662 GN=LOC111458171 PE=4 SV=1) HSP 1 Score: 224 bits (571), Expect = 1.20e-73 Identity = 122/127 (96.06%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. ExPASy TrEMBL
Match: A0A6J1IR14 (uncharacterized protein LOC111477668 OS=Cucurbita maxima OX=3661 GN=LOC111477668 PE=4 SV=1) HSP 1 Score: 220 bits (560), Expect = 5.72e-72 Identity = 120/127 (94.49%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. ExPASy TrEMBL
Match: A0A0A0KWA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606860 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 6.31e-47 Identity = 94/132 (71.21%), Postives = 106/132 (80.30%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. ExPASy TrEMBL
Match: A0A5D3CCI7 (Putative root meristem growth factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00260 PE=4 SV=1) HSP 1 Score: 155 bits (392), Expect = 2.64e-46 Identity = 94/132 (71.21%), Postives = 104/132 (78.79%), Query Frame = 0
BLAST of Cp4.1LG01g13130 vs. ExPASy TrEMBL
Match: A0A6J1D6T9 (uncharacterized protein LOC111017571 OS=Momordica charantia OX=3673 GN=LOC111017571 PE=4 SV=1) HSP 1 Score: 144 bits (364), Expect = 4.38e-42 Identity = 83/132 (62.88%), Postives = 99/132 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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