Cp4.1LG01g12220.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG01g12220.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cell division topological specificity factor homolog, chloroplastic-like
Location	Cp4.1LG01: 8908389 .. 8913964 (-)
Sequence length	1966
RNA-Seq Expression	Cp4.1LG01g12220.1
Synteny	Cp4.1LG01g12220.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTGGTAAATAATATAAGAAGTCTAACATCTACCATTTGATGTAATAAAAGTAGTCTAATCACCCTTAATACATTTGTTAATGTAATAGTTCTACTAGGGATATACACGGGTTGAGTTGAGTTTTATTTTTATTTTTACTGATTTGAAATTTTGAATTGGTTGGATTAGTGACTCGAGCAACTTGAATAGAATTCACAATTTAACTCAATCCAACACTCTATTTTTTGTTGAGTTGTCGAGTAATTTTTTAATTATTTTTTAAATAACATACGTCGTAATACATTTTATATTGATAATTAAAATTTTATAAACTTCACAAAATATATTATCGATTACAAACTATAGGATAGAGTTACGTTGGATTGTAATTCAATTTTTGAATTGGGTTAATTCAATAAATAATAATAATAATAATAATAATAATAATAAAAAAAAAGTAACCAAAATTTGAGTTTTTATGTTAAGTTCAATGGATGTTTGGTTCAGAAATGTAAAATGAAAAGAGAATTTTCAATCTTTGGGGTTAAAAGTGAATAAAATCTACCGTATTGGTAGATGTAATTTTGTTGGCTTAAAAATTAGTGTGAATTAGAGTTTTGAGCTGTAAACCATGAAGAGTGGACCCCACCGACCCATGTGCCAAATCATCTTCATCGTCCAATCACCCAATCGAATCATTCTCGTCTTTCAATTCACGATTCCCAGTAAAAGGCGTGGAATTTTCTCCCTTTTAATTCCCTTTCTGTTTTTTCTGTCTTCTCGACCCGCCACTGTTTTGGAAATATATATATATATATATATATAATTTTATTTTAAAAGTCGGTGTCTATTTCATTTATATTTTTATAATTAATTTTATATTCATAAAGAATTTAAAATTATATATATATATTTTAAAATTTTAAGTTAGGCGTTAGAATAGCGAATGGCATAGCCGTGAAACCGCTCAAAAGCCTGAAGATTAGCTCCACGCCAAATTACCAAATTACCCTCTCGATTGCATTTCACACTCACTGGCAATTCACATTTGACAGTGGCGCCTTTGTCTTCTCGAGGTGGCTTCAGATTTATATGGGTGTGGCTCCCATTTTCTCCACTTCTCTTACTTCCCCCATTTTCTTCTCTCCCAGCCCAGCTCTAGAGGGAGTGAAGGTCGGTCCGAGCTGCAAAAATGGAGAAGGCCTTGACCAGAGTGAGCAGCTTAAAGGTCGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAATATCACCGACGATTTCCAAGTGAGTTTCTGTTCTTGTTTCTGCTTTGTGTTTGTCAATTTTGTTCGTTCGTTTGTGTTTTGTGTAGCCGTGCATCTGCCTGTGTTTTTCTTTTATTTTAGTGTTGAGTTTCTTTTTACTTTTCGCGATTTGAGAAATGAAGCTACCCTTCATTGTCATTAGCGGTGGACTTTGTACTGATTTTTCTTTGTATATGGCTTAGTACCGAGATTAAGGCGAGATCCGTTGGTTTCTTCCACTAATCAGAGGATTGACCGATAGGGTTATGATGGAAGTGAGAATGGACTGATCTATTAAGGAGATGCTGATATGTATTTCTCTTTTTGTAATGTTTCTTTCAAACGTGAGGTTGATTGTTAAATGTCGAACAGGACGCTTGATGCAAACACGGCAAAATCAGATTATATCTGGATGCTCAAAACCTGCTTTAAGTAGCAATTGGCATCAGCTAAAACTCTGAGCGTCTCTCCATTTCTGTATAGGCGAATATCGAACTTAGACCTTGGTTAGAATCTCATATATTTTATCTTTTGTTGCAGACTTTCTCAAATACCGTGGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGTGACCTCTTGCACATCCTCTCCTTTCATATTAGGATAATTGCATATTCAATGCTGGATTGATGAACCATATTGCTGCTATATCCGGTTGCATTCTGTGGGAAGTGCAGGATAAATGGATAATCCCTACCTCAGCCTCTCAGCTTCTCCCGAAATTTCCCTATGAATGAAATTTCCCCTTTCGTTTTTCCATTTCCTTTTGAATGAGTTCATTATGAATGTGTCAGTAGGACTTCCCTGTATGTCCTCAGTTTCGTTTAACCAGGGCTCTCGGTTTTTGAGCATATTGGGAGATTAGTGCGGAGGAGCTATTATCGCCCCAATCCCTAACCTAATGTGGCACTGGGTTCAGGCCAAAGCGCGCAGCCCTCCTAGGCGCGTAACATCATGACCTCTCTTCTCGTACCGCTAGGGATCAGAATTTTCCTTTGCCCTTTCTGCATATCTGATTTGTTCATATTCTATCAAACTATCTTTCACTCCCTTTATGACTGCCTCTCATCTCCTCTATTAAGTCTTAGTAGATTTACATGAGCTTAATACTGAAGAAAATCATAACCCATCTTAGCATTCAACATTTTTTTTCCCTCCCCACAGGAAAGCCATTGAAGAGCCTGCCGGAATTACTCCGTGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATAATCAGCTACGAATTTGATGAATCCAGGTCCAGGCTGATTGTGTACTTACCATCCGTTTGTGAGATAAGCTTCAAGGATTCTTCTGTGGTCAGATATGCAACACGGGTGAAAGGAACTCTTCAGAGAGGGAAGCTAACAAGCATTGAAGGAATGAAGACAAAAGTCCTAGTGTGGGTGAAAGTGACAAGCGTGATGGTTGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGACCGAAAGATGCGTACGATAAGCCCCGTGACGCCGTTAGGGTAGAAGAATTCTGATATTCAAACTATGGCACATTGTTAGGCATCATTAAGGATAGCAGGGAAATGAATCCTGTGGGTTACATTAGCTGCATTTGAATCTTGTCTCCTTTTATTATAGATATTGTTTTCATGAGGAGTGTCCAAACCAGTTGATCCATAAAATGTAATGCTTCCCAACTTGCTTACCTAGCGGAGCTGATAGCTTATGAAGAGACTGGTAGTGTTAAGGGTTACAATATTTTTTTAGAGATAAATAAATATGCATTTATTGACTTTTTTTTCCTTTCTTTTTTTGGATTTTCTTCTATTTTTCGTAAAATTAAATTAATTTTAAGAATGGGAAAGGAGAAAAAAGACAAACAGAAAATGGGAAATGACAGTGTTACCAAATTGGCTCGAACTAATGTTTTATTTTCTTTATTTATTTTGGAAACAAAAAGGAGAAAAAAGTAATTACACGTCATCCGAGTAAACGACGTCGTTTATCTGGACATTGGTACCCGACTTTTAGCGTCGTCGTTTCAGGCCTCTGTACGACCGTTGCTCAGCGCTAGAACCTGATAATGGTCCCTAGTCAGTAGTTCTCTCAGGTAAAGAGAGTGAAAGCGCGGGAGAACGAAACAGGGAAAAGAACTCGAAAATGGCGATGCCTGGATATCCAAGGGCTTTTGCAACACTAGGTTCTTGTTATCCACGGCATTCTCCGATCTCCCTTCATCCTCTTAAGGTTTGAAACTCAATTCTCTAAGCTTCATTTCTCTAATACTAAGCTTTCTTATCTTCAATTTCATCCCAGTTTGTTGGCATTCGTCAAATGCATCTCAATTTCTCCAACAAATTCATGGAATAGACTTTGATGTTTGTAAGAAGGAACTAGATTAGTCGTTAGCCTTTGGAAATTTGCATATTAAGTGATATCGAACATGTCTATAGTTTTCAAGTTATTACTTTCTGGAATCTGATTCTGTGATTTGCCATTCTACCTTTTTGTTTTGATCGAAACCTTTCGGCTATATCATTTCGGGATCGCAGTTTGTGGATTCTTTTTCCGTTTCTGACGGCAGTGTTCAAATACTAGTTGTTTAGTTGCTTCTTCAGGTCTTTATTGATTTATTTGTGCCTTTGGACTTGATTTTGAACTCAACTCTTGATGCCGCTTGGACATTTTTCCAGGTTTTCCAGTTATTAATAGTTGTCTTGGTCAAGTAATTGCACCGAGTCGTGTTTGAATTTCAATAGTTGAGATGGCTTAGACTGTGTTTCTTGATAGTTGCAAGACATATACTAACACTGGTTTGGTTTCTCCCAAGTTGCGTCGTTGAAGTGTCTATAACATGAACTTAGATGGCCTATCTACGAAGATTTTTTAAACCTTTCTTTTATTTCAGTTTTAGTTCTGGAGACAATCGAGATGTTTGTTCAGATTTTACTGCATCTTCTGTATAGTGATTGGTATGGAGAAATAAAGGAATCGCGGCTTTCCTTAGTTTGAGATCAATTTATTGTACTGCAGGTTGACCTCTCTGGTTTTGTTCATAGAAGATCTGGAAATAAAGGAATCAAGCCAAAATGGCGCACCATGGCACATGAAAATGATAGCATACATAGTATCTCCCAGCAAGATGTTGAGAGCTCAGCAGATTATGAACGATCACCAAGATCCTTAAGCCAAGAAAGCTTTATCCTCAGTTCCATGAAGATGAACTTCTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACATCTAAATCGAACTCTAATGCTATGATTGCCAAGCAGCGGTTAAAGATGATTCTGTTGTCCGATCGATGTGCAGTTAATGATGAAACTAAACAAAAAATTGTGGACAGCATGTTGAGTTCTCTTTCGGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTCAGATCTCAGAACGATTTACTCTGTAACGGTGCCCGTGCGAAGGGTGAAGGCTGATTATCAAGGCAGTGAGGAAGTTGGAGCAACCATAAATACAGAATTGAAGGATGATGGAGAGAGATCTGGCTCTGCAGGTCCCATTTTCGACTCATTAATTGCAGAAGGAAAAGGTTCTTAAGTCCTGCTTCATTGTCTCATTTTTTATTTATGAAAACTTAGTGTAGTTGCAAAAACTTTTATTTGTTTGATCTTGTTGTGTAGAGTATTTGCTGTTCTTCGGACCATAGCTATTTCATTTTCAACAGGGTAAGCTGCTAATTAACAAGACTGTGCACTCTAGCTTCTCTCTGTCCGCTTGTTGACCATCGGTGTTTGCTTATAGCAGATTTAAATTAAGGTACGCTGATTTTCAACTCATTAGTGTCGGATGAAAGTGTCCCACATCCGTTAATTTAGGGAATAGTCATGGGTTTATAATCAAAGAATACACTCTCCATGGTGTGAGGCATTTTAGGAAGGCCAAAGCAAAGCTCATACCATTGTGGAGAGTCGATTCCTAAGGTATCAGAGTCATCCTTTACCATTAAATTACAAAAGATTAATCTCATGTCCAAAACTTAAATCTGGACAATTTAAGTTGATATCCATTTTTATTTTTAAAAGTTAAGCTCGGTTTTTTATTTTTTTTAGTTTATTGCCTGTTTTTAAAAATGAAGTCAAATTTTGAAATCTAAAAAAAAGTAGTTTTTAACAACAAATTTGGTTTAGAATTAAATGTGGTTTTTATGGAAGGTGATAAGTTTACCA

mRNA sequence

ATGAGCGTGTTAGGCGTTAGAATAGCGAATGGCATAGCCGTGAAACCGCTCAAAAGCCTGAAGATTAGCTCCACGCCAAATTACCAAATTACCCTCTCGATTGCATTTCACACTCACTGGCAATTCACATTTGACAGTGGCGCCTTTGTCTTCTCGAGGTCGGTCCGAGCTGCAAAAATGGAGAAGGCCTTGACCAGAGTGAGCAGCTTAAAGGTCGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAATATCACCGACGATTTCCAAACTTTCTCAAATACCGTGGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCCTGCCGGAATTACTCCGTGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATAATCAGCTACGAATTTGATGAATCCAGGTCCAGGCTGATTGTGTACTTACCATCCGTTTGTGAGATAAGCTTCAAGGATTCTTCTGTGGTCAGATATGCAACACGGGTGAAAGGAACTCTTCAGAGAGGGAAGCTAACAAGCATTGAAGGAATGAAGACAAAAGTCCTAGTGTGGGTGAAAGTGACAAGCGTGATGGTTGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGACCGAAAGATGCGTACGATAAGCCCCGTGACGCCGTTAGGAGTGAAAGCGCGGGAGAACGAAACAGGGAAAAGAACTCGAAAATGGCGATGCCTGGATATCCAAGGGCTTTTGCAACACTAGGTTCTTGTTATCCACGGCATTCTCCGATCTCCCTTCATCCTCTTAAGGTTGACCTCTCTGGTTTTGTTCATAGAAGATCTGGAAATAAAGGAATCAAGCCAAAATGGCGCACCATGGCACATGAAAATGATAGCATACATAGTATCTCCCAGCAAGATGTTGAGAGCTCAGCAGATTATGAACGATCACCAAGATCCTTAAGCCAAGAAAGCTTTATCCTCAGTTCCATGAAGATGAACTTCTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACATCTAAATCGAACTCTAATGCTATGATTGCCAAGCAGCGGTTAAAGATGATTCTGTTGTCCGATCGATGTGCAGTTAATGATGAAACTAAACAAAAAATTGTGGACAGCATGTTGAGTTCTCTTTCGGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTCAGATCTCAGAACGATTTACTCTGTAACGGTGCCCGTGCGAAGGGTGAAGGCTGATTATCAAGGCAGTGAGGAAGTTGGAGCAACCATAAATACAGAATTGAAGGATGATGGAGAGAGATCTGGCTCTGCAGGTCCCATTTTCGACTCATTAATTGCAGAAGGAAAAGAGTATTTGCTGTTCTTCGGACCATAGCTATTTCATTTTCAACAGGGTAAGCTGCTAATTAACAAGACTGTGCACTCTAGCTTCTCTCTGTCCGCTTGTTGACCATCGGTGTTTGCTTATAGCAGATTTAAATTAAGGTACGCTGATTTTCAACTCATTAGTGTCGGATGAAAGTGTCCCACATCCGTTAATTTAGGGAATAGTCATGGGTTTATAATCAAAGAATACACTCTCCATGGTGTGAGGCATTTTAGGAAGGCCAAAGCAAAGCTCATACCATTGTGGAGAGTCGATTCCTAAGGTATCAGAGTCATCCTTTACCATTAAATTACAAAAGATTAATCTCATGTCCAAAACTTAAATCTGGACAATTTAAGTTGATATCCATTTTTATTTTTAAAAGTTAAGCTCGGTTTTTTATTTTTTTTAGTTTATTGCCTGTTTTTAAAAATGAAGTCAAATTTTGAAATCTAAAAAAAAGTAGTTTTTAACAACAAATTTGGTTTAGAATTAAATGTGGTTTTTATGGAAGGTGATAAGTTTACCA

Coding sequence (CDS)

ATGAGCGTGTTAGGCGTTAGAATAGCGAATGGCATAGCCGTGAAACCGCTCAAAAGCCTGAAGATTAGCTCCACGCCAAATTACCAAATTACCCTCTCGATTGCATTTCACACTCACTGGCAATTCACATTTGACAGTGGCGCCTTTGTCTTCTCGAGGTCGGTCCGAGCTGCAAAAATGGAGAAGGCCTTGACCAGAGTGAGCAGCTTAAAGGTCGGGAGCTTGTGGATTTCAAAGAAAGCCAAGGAGGAACTCGCTAATATCACCGACGATTTCCAAACTTTCTCAAATACCGTGGAAGAGAAGGCAAAGTGGATTTTCAACAAGCTAAAAGGAAAGCCATTGAAGAGCCTGCCGGAATTACTCCGTGAGTACAACTTACCGCCCGGCCTCTTTCCTCAGAACATAATCAGCTACGAATTTGATGAATCCAGGTCCAGGCTGATTGTGTACTTACCATCCGTTTGTGAGATAAGCTTCAAGGATTCTTCTGTGGTCAGATATGCAACACGGGTGAAAGGAACTCTTCAGAGAGGGAAGCTAACAAGCATTGAAGGAATGAAGACAAAAGTCCTAGTGTGGGTGAAAGTGACAAGCGTGATGGTTGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGACCGAAAGATGCGTACGATAAGCCCCGTGACGCCGTTAGGAGTGAAAGCGCGGGAGAACGAAACAGGGAAAAGAACTCGAAAATGGCGATGCCTGGATATCCAAGGGCTTTTGCAACACTAGGTTCTTGTTATCCACGGCATTCTCCGATCTCCCTTCATCCTCTTAAGGTTGACCTCTCTGGTTTTGTTCATAGAAGATCTGGAAATAAAGGAATCAAGCCAAAATGGCGCACCATGGCACATGAAAATGATAGCATACATAGTATCTCCCAGCAAGATGTTGAGAGCTCAGCAGATTATGAACGATCACCAAGATCCTTAAGCCAAGAAAGCTTTATCCTCAGTTCCATGAAGATGAACTTCTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCATCATCAACATCTAAATCGAACTCTAATGCTATGATTGCCAAGCAGCGGTTAAAGATGATTCTGTTGTCCGATCGATGTGCAGTTAATGATGAAACTAAACAAAAAATTGTGGACAGCATGTTGAGTTCTCTTTCGGATTTTGTAGAAATAGATTCAGAAGATAAAGTTCAATTTAATGTCTCTACTGATTCAGATCTCAGAACGATTTACTCTGTAACGGTGCCCGTGCGAAGGGTGAAGGCTGATTATCAAGGCAGTGAGGAAGTTGGAGCAACCATAAATACAGAATTGAAGGATGATGGAGAGAGATCTGGCTCTGCAGGTCCCATTTTCGACTCATTAATTGCAGAAGGAAAAGAGTATTTGCTGTTCTTCGGACCATAG

Protein sequence

MSVLGVRIANGIAVKPLKSLKISSTPNYQITLSIAFHTHWQFTFDSGAFVFSRSVRAAKMEKALTRVSSLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAVRSESAGERNREKNSKMAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIHSISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP

Homology

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BLAST of Cp4.1LG01g12220.1 vs. ExPASy Swiss-Prot
Match: Q9M015 (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.0e-42
Identity = 81/163 (49.69%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 71  KVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPG 130
           KVGS W+ +KA ++  ++ +D  + S ++E   KW+ NK+KGK  K LPELL+EY+LP G
Sbjct: 7   KVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIG 66

Query: 131 LFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTK 190
           +FP +  +YEFDE   +L V +PS+CE+ +KDSSV+++ T V G L++GKLT +EG+KTK
Sbjct: 67  IFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126

Query: 191 VLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAVR 234
           V++WVKVTS+  +   + KV+FTAG+KKSR +DAY+  R+ +R
Sbjct: 127 VMIWVKVTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLR 166

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BLAST of Cp4.1LG01g12220.1 vs. ExPASy Swiss-Prot
Match: Q9C4Z7 (Cell division topological specificity factor homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MINE1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.5e-41
Identity = 111/231 (48.05%), Postives = 143/231 (61.90%), Query Frame = 0


Query: 248 MAM-PGYPRAFATLGSCYPRH--SPISL--HPLKVDLSGFVHRRSGNKGIKPKWRTMAHE 307
           MAM  G  R  ATL S Y  H  + +SL     KVD +GF+     +   +     +A  
Sbjct: 1   MAMSSGTLRISATLVSPYHHHHRNRLSLPSSSSKVDFTGFISNGVNSLETQKCTPGLAIS 60

Query: 308 NDSIHSISQQDVESSADYERSPRSLSQ--ESFILSSMKMNFLERLILAWRIIFPSSTSKS 367
            ++     +    ++ DYE SP    Q  ESF+ +++ M F +RL LAW+IIFPS  S+ 
Sbjct: 61  RENTRGQVKVLARNTGDYELSPSPAEQEIESFLYNAINMGFFDRLNLAWKIIFPSHASRR 120

Query: 368 NSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDL 427
           +SNA IAKQRLKMIL SDRC V+DE K+KIV++++ +LSDFVEI+SE+KVQ NVSTD DL
Sbjct: 121 SSNARIAKQRLKMILFSDRCDVSDEAKRKIVNNIIHALSDFVEIESEEKVQLNVSTDGDL 180

Query: 428 RTIYSVTVPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAE 472
            TIYSVTVPVRRVK +YQ  +E G   N E KD   R GS    FD  + E
Sbjct: 181 GTIYSVTVPVRRVKPEYQDVDEAGTITNVEYKD--TRDGSVDVRFDFYVPE 229

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BLAST of Cp4.1LG01g12220.1 vs. NCBI nr
Match: KAG7032242.1 (Eukaryotic translation initiation factor 5A-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 803 bits (2073), Expect = 1.33e-288
Identity = 414/428 (96.73%), Postives = 419/428 (97.90%), Query Frame = 0


Query: 60  MEKALTRVSSLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLP 119
           MEKALTRV+SLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTRVTSLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 120 ELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRG 179
           ELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRG
Sbjct: 61  ELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRG 120

Query: 180 KLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAV------R 239
           KLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDA        
Sbjct: 121 KLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDASVVLSGKE 180

Query: 240 SESAGERNREKNSKMAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIK 299
           SESAGERNRE+NSKMAMPGYPRAFATLGSCYPRHSPISLHPL+VDLSGFVHRRSGNKGIK
Sbjct: 181 SESAGERNRERNSKMAMPGYPRAFATLGSCYPRHSPISLHPLEVDLSGFVHRRSGNKGIK 240

Query: 300 PKWRTMAHENDSIHSISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIF 359
           PKWRTMAHEND+IHSISQQDVESSADYERSPRSLSQES ILSSMKMNFLERLILAWRIIF
Sbjct: 241 PKWRTMAHENDTIHSISQQDVESSADYERSPRSLSQESLILSSMKMNFLERLILAWRIIF 300

Query: 360 PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFN 419
           PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFN
Sbjct: 301 PSSTSKSNSNAMIAKQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFN 360

Query: 420 VSTDSDLRTIYSVTVPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGK 479
           VSTDSDLRTIYSVTVPVRRVKADYQGSEE+GATINTELKDDGERSGSAGPIFDSLIAEGK
Sbjct: 361 VSTDSDLRTIYSVTVPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDSLIAEGK 420

Query: 480 EYLLFFGP 481
           EYLLFFGP
Sbjct: 421 EYLLFFGP 428

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BLAST of Cp4.1LG01g12220.1 vs. NCBI nr
Match: XP_023551705.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023551706.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456 bits (1174), Expect = 1.19e-157
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH
Sbjct: 1   MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP 481
           VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP
Sbjct: 181 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP 234

[Close]

BLAST of Cp4.1LG01g12220.1 vs. NCBI nr
Match: XP_022996844.1 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 450 bits (1158), Expect = 3.19e-155
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFAT+GSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHEND IH
Sbjct: 1   MAMPGYPRAFATVGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDRIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SIS+QDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  SISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP 481
           VPVRRVKADYQGSEEVGATINTELKDDGERSG AGPIFDSLIAEGKEYLLFFGP
Sbjct: 181 VPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAEGKEYLLFFGP 234

[Close]

BLAST of Cp4.1LG01g12220.1 vs. NCBI nr
Match: XP_022957365.1 (cell division topological specificity factor homolog, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 447 bits (1151), Expect = 4.93e-154
Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFATLGSCYPRHSPISL P KVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH
Sbjct: 1   MAMPGYPRAFATLGSCYPRHSPISLQPPKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
            ISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  GISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP 481
           VPVRRVKADYQGSEE+GATINTELKDDGERSGSAGPIFD+LIAEGKEYLLFFGP
Sbjct: 181 VPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDALIAEGKEYLLFFGP 234

[Close]

BLAST of Cp4.1LG01g12220.1 vs. NCBI nr
Match: KAG6601459.1 (Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 437 bits (1125), Expect = 2.54e-150
Identity = 224/226 (99.12%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHEND+IH
Sbjct: 1   MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDTIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGK 473
           VPVRRVKADYQGSEE+GATINTELKDDGERSGSAGPIFDSLIAEGK
Sbjct: 181 VPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDSLIAEGK 226

[Close]

BLAST of Cp4.1LG01g12220.1 vs. ExPASy TrEMBL
Match: A0A6J1K9T9 (cell division topological specificity factor homolog, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491965 PE=3 SV=1)

HSP 1 Score: 450 bits (1158), Expect = 1.55e-155
Identity = 230/234 (98.29%), Postives = 232/234 (99.15%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFAT+GSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHEND IH
Sbjct: 1   MAMPGYPRAFATVGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDRIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SIS+QDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  SISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP 481
           VPVRRVKADYQGSEEVGATINTELKDDGERSG AGPIFDSLIAEGKEYLLFFGP
Sbjct: 181 VPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAEGKEYLLFFGP 234

[Close]

BLAST of Cp4.1LG01g12220.1 vs. ExPASy TrEMBL
Match: A0A6J1H0C0 (cell division topological specificity factor homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458787 PE=3 SV=1)

HSP 1 Score: 447 bits (1151), Expect = 2.39e-154
Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFATLGSCYPRHSPISL P KVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH
Sbjct: 1   MAMPGYPRAFATLGSCYPRHSPISLQPPKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
            ISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  GISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGKEYLLFFGP 481
           VPVRRVKADYQGSEE+GATINTELKDDGERSGSAGPIFD+LIAEGKEYLLFFGP
Sbjct: 181 VPVRRVKADYQGSEEIGATINTELKDDGERSGSAGPIFDALIAEGKEYLLFFGP 234

[Close]

BLAST of Cp4.1LG01g12220.1 vs. ExPASy TrEMBL
Match: A0A6J1K368 (cell division topological specificity factor homolog, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491965 PE=3 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 8.14e-149
Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MAMPGYPRAFAT+GSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHEND IH
Sbjct: 1   MAMPGYPRAFATVGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDRIH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SIS+QDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA
Sbjct: 61  SISEQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGK 473
           VPVRRVKADYQGSEEVGATINTELKDDGERSG AGPIFDSLIAEGK
Sbjct: 181 VPVRRVKADYQGSEEVGATINTELKDDGERSGPAGPIFDSLIAEGK 226

[Close]

BLAST of Cp4.1LG01g12220.1 vs. ExPASy TrEMBL
Match: A0A5A7SVD6 (Cell division topological specificity factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00060 PE=3 SV=1)

HSP 1 Score: 358 bits (918), Expect = 3.04e-119
Identity = 184/226 (81.42%), Postives = 199/226 (88.05%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MA+P  PRAFATLGSCYPR SP SLHP K D S FVHRR GNKG +PKW TMAHENDS+H
Sbjct: 1   MAIPADPRAFATLGSCYPRRSPASLHPRKADFSSFVHRRYGNKGTRPKWHTMAHENDSLH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SIS ++VE+SA YE+S +SLSQESFILSSM MNFLERL LAWRIIFPSS  K  SNA IA
Sbjct: 61  SISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRIIFPSSAPKMKSNATIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGK 473
           VPVRRVKA+YQGSEEVGA  NT+LKDDGE SGSAG IFDSL+A+GK
Sbjct: 181 VPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADGK 226

[Close]

BLAST of Cp4.1LG01g12220.1 vs. ExPASy TrEMBL
Match: A0A1S3BEH9 (cell division topological specificity factor homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489163 PE=3 SV=1)

HSP 1 Score: 358 bits (918), Expect = 3.04e-119
Identity = 184/226 (81.42%), Postives = 199/226 (88.05%), Query Frame = 0


Query: 248 MAMPGYPRAFATLGSCYPRHSPISLHPLKVDLSGFVHRRSGNKGIKPKWRTMAHENDSIH 307
           MA+P  PRAFATLGSCYPR SP SLHP K D S FVHRR GNKG +PKW TMAHENDS+H
Sbjct: 1   MAIPADPRAFATLGSCYPRRSPASLHPRKADFSSFVHRRYGNKGTRPKWHTMAHENDSLH 60

Query: 308 SISQQDVESSADYERSPRSLSQESFILSSMKMNFLERLILAWRIIFPSSTSKSNSNAMIA 367
           SIS ++VE+SA YE+S +SLSQESFILSSM MNFLERL LAWRIIFPSS  K  SNA IA
Sbjct: 61  SISLENVENSAKYEQSSKSLSQESFILSSMNMNFLERLKLAWRIIFPSSAPKMKSNATIA 120

Query: 368 KQRLKMILLSDRCAVNDETKQKIVDSMLSSLSDFVEIDSEDKVQFNVSTDSDLRTIYSVT 427
           KQRLKMILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVT
Sbjct: 121 KQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVT 180

Query: 428 VPVRRVKADYQGSEEVGATINTELKDDGERSGSAGPIFDSLIAEGK 473
           VPVRRVKA+YQGSEEVGA  NT+LKDDGE SGSAG IFDSL+A+GK
Sbjct: 181 VPVRRVKAEYQGSEEVGAITNTDLKDDGEESGSAGLIFDSLVADGK 226

[Close]

BLAST of Cp4.1LG01g12220.1 vs. TAIR 10
Match: AT2G03350.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 271.2 bits (692), Expect = 1.6e-72
Identity = 131/174 (75.29%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 60  MEKALTRVSSLKVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLP 119
           MEKALT+V+S KVGS WISKKAKEEL+NIT+D  TFS+TVEEKAKWIFNKLKGKPLKSLP
Sbjct: 1   MEKALTKVTSFKVGSSWISKKAKEELSNITNDLTTFSSTVEEKAKWIFNKLKGKPLKSLP 60

Query: 120 ELLREYNLPPGLFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRG 179
           +LL+EYNLPPGLFPQNII YEFDE++++L V+  S CE++FKD S +RYATRVKG L RG
Sbjct: 61  DLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRG 120

Query: 180 KLTSIEGMKTKVLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAVR 234
           KL  +EGMKTKVLVWVKVT++ VE  KSDK+WFTAGVKKSR KD YD P DA++
Sbjct: 121 KLMGVEGMKTKVLVWVKVTTISVESSKSDKLWFTAGVKKSRSKDVYDTPHDAIK 174

[Close]

BLAST of Cp4.1LG01g12220.1 vs. TAIR 10
Match: AT3G08890.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 180.6 bits (457), Expect = 2.9e-45
Identity = 84/162 (51.85%), Postives = 121/162 (74.69%), Query Frame = 0


Query: 71  KVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPG 130
           KVGS W+ KKA ++L ++ DD  + S+++E   KW+ NK+KGK  K LPELL+E+ LP G
Sbjct: 7   KVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKEFGLPVG 66

Query: 131 LFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTK 190
           +FP++  +YEF+E   +L V++PS+CE+ +KD+SV+R+ T V G L++GKL  +EGMKTK
Sbjct: 67  IFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADVEGMKTK 126

Query: 191 VLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAV 233
           V++WVKVTS+  +   S KV FTAG+KKSR +DAY+  RD V
Sbjct: 127 VMIWVKVTSISAD---SSKVHFTAGMKKSRSRDAYEVLRDGV 165

[Close]

BLAST of Cp4.1LG01g12220.1 vs. TAIR 10
Match: AT3G08890.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 180.6 bits (457), Expect = 2.9e-45
Identity = 84/162 (51.85%), Postives = 121/162 (74.69%), Query Frame = 0


Query: 71  KVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPG 130
           KVGS W+ KKA ++L ++ DD  + S+++E   KW+ NK+KGK  K LPELL+E+ LP G
Sbjct: 7   KVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKEFGLPVG 66

Query: 131 LFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTK 190
           +FP++  +YEF+E   +L V++PS+CE+ +KD+SV+R+ T V G L++GKL  +EGMKTK
Sbjct: 67  IFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADVEGMKTK 126

Query: 191 VLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAV 233
           V++WVKVTS+  +   S KV FTAG+KKSR +DAY+  RD V
Sbjct: 127 VMIWVKVTSISAD---SSKVHFTAGMKKSRSRDAYEVLRDGV 165

[Close]

BLAST of Cp4.1LG01g12220.1 vs. TAIR 10
Match: AT5G37070.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 179.1 bits (453), Expect = 8.5e-45
Identity = 83/162 (51.23%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 71  KVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPG 130
           KVGS W+ +KA +E  ++ DDF + S+++E   KW+ NKLKGK  K LPELL+E+ LP G
Sbjct: 7   KVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKEFGLPVG 66

Query: 131 LFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTK 190
           +FPQ+  +YEF+E   +L V++P  CE+ ++DSSV+R++T V G L++GKL  +EGMKTK
Sbjct: 67  IFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKGKLAEVEGMKTK 126

Query: 191 VLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAV 233
           V++WVKVT +  +   S KV+FTAG+KKSR +DAY+  R  V
Sbjct: 127 VMIWVKVTCISAD---SSKVYFTAGIKKSRSRDAYEVIRPGV 165

[Close]

BLAST of Cp4.1LG01g12220.1 vs. TAIR 10
Match: AT5G01610.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 176.0 bits (445), Expect = 7.2e-44
Identity = 81/163 (49.69%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 71  KVGSLWISKKAKEELANITDDFQTFSNTVEEKAKWIFNKLKGKPLKSLPELLREYNLPPG 130
           KVGS W+ +KA ++  ++ +D  + S ++E   KW+ NK+KGK  K LPELL+EY+LP G
Sbjct: 7   KVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIG 66

Query: 131 LFPQNIISYEFDESRSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTK 190
           +FP +  +YEFDE   +L V +PS+CE+ +KDSSV+++ T V G L++GKLT +EG+KTK
Sbjct: 67  IFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126

Query: 191 VLVWVKVTSVMVEGYKSDKVWFTAGVKKSRPKDAYDKPRDAVR 234
           V++WVKVTS+  +   + KV+FTAG+KKSR +DAY+  R+ +R
Sbjct: 127 VMIWVKVTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLR 166

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g12220.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M015	1.0e-42	49.69	Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 P...	[more]
Q9C4Z7	2.5e-41	48.05	Cell division topological specificity factor homolog, chloroplastic OS=Arabidops...	[more]

BLAST of Cp4.1LG01g12220.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032242.1	1.33e-288	96.73	Eukaryotic translation initiation factor 5A-2 [Cucurbita argyrosperma subsp. arg...	[more]
XP_023551705.1	1.19e-157	100.00	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]
XP_022996844.1	3.19e-155	98.29	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
XP_022957365.1	4.93e-154	97.86	cell division topological specificity factor homolog, chloroplastic-like [Cucurb...	[more]
KAG6601459.1	2.54e-150	99.12	Cell division topological specificity factor-like, chloroplastic, partial [Cucur...	[more]

BLAST of Cp4.1LG01g12220.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K9T9	1.55e-155	98.29	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
A0A6J1H0C0	2.39e-154	97.86	cell division topological specificity factor homolog, chloroplastic-like OS=Cucu...	[more]
A0A6J1K368	8.14e-149	98.23	cell division topological specificity factor homolog, chloroplastic-like isoform...	[more]
A0A5A7SVD6	3.04e-119	81.42	Cell division topological specificity factor-like protein OS=Cucumis melo var. m...	[more]
A0A1S3BEH9	3.04e-119	81.42	cell division topological specificity factor homolog, chloroplastic OS=Cucumis m...	[more]

BLAST of Cp4.1LG01g12220.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03350.1	1.6e-72	75.29	Protein of unknown function, DUF538	[more]
AT3G08890.1	2.9e-45	51.85	Protein of unknown function, DUF538	[more]
AT3G08890.2	2.9e-45	51.85	Protein of unknown function, DUF538	[more]
AT5G37070.1	8.5e-45	51.23	Protein of unknown function, DUF538	[more]
AT5G01610.1	7.2e-44	49.69	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005527	Cell division topological specificity factor MinE	PFAM	PF03776	MinE	coord: 365..431 e-value: 2.5E-12 score: 46.6
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 120..225 e-value: 7.7E-29 score: 100.4
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 62..235
IPR036707	Cell division topological specificity factor MinE superfamily	GENE3D	3.30.1070.10	Cell division topological specificity factor MinE	coord: 351..430 e-value: 3.7E-7 score: 31.7
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 96..236 e-value: 4.5E-44 score: 151.5
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 71..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..246
None	No IPR available	PANTHER	PTHR31676:SF142	SUBFAMILY NOT NAMED	coord: 62..235

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g12220	Cp4.1LG01g12220	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g12220.1:three_prime_utr:001	Cp4.1LG01g12220.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g12220.1:exon:008	Cp4.1LG01g12220.1:exon:008	exon
Cp4.1LG01g12220.1:exon:007	Cp4.1LG01g12220.1:exon:007	exon
Cp4.1LG01g12220.1:exon:006	Cp4.1LG01g12220.1:exon:006	exon
Cp4.1LG01g12220.1:exon:005	Cp4.1LG01g12220.1:exon:005	exon
Cp4.1LG01g12220.1:exon:004	Cp4.1LG01g12220.1:exon:004	exon
Cp4.1LG01g12220.1:exon:003	Cp4.1LG01g12220.1:exon:003	exon
Cp4.1LG01g12220.1:exon:002	Cp4.1LG01g12220.1:exon:002	exon
Cp4.1LG01g12220.1:exon:001	Cp4.1LG01g12220.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g12220.1:cds:008	Cp4.1LG01g12220.1:cds:008	CDS
Cp4.1LG01g12220.1:cds:007	Cp4.1LG01g12220.1:cds:007	CDS
Cp4.1LG01g12220.1:cds:006	Cp4.1LG01g12220.1:cds:006	CDS
Cp4.1LG01g12220.1:cds:005	Cp4.1LG01g12220.1:cds:005	CDS
Cp4.1LG01g12220.1:cds:004	Cp4.1LG01g12220.1:cds:004	CDS
Cp4.1LG01g12220.1:cds:003	Cp4.1LG01g12220.1:cds:003	CDS
Cp4.1LG01g12220.1:cds:002	Cp4.1LG01g12220.1:cds:002	CDS
Cp4.1LG01g12220.1:cds:001	Cp4.1LG01g12220.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g12220.1	Cp4.1LG01g12220.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0032955	regulation of division septum assembly
biological_process	GO:0010020	chloroplast fission