Cp4.1LG06g09060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g09060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin-like protein CXXS1
Location	Cp4.1LG06: 4663053 .. 4666113 (+)
RNA-Seq Expression	Cp4.1LG06g09060
Synteny	Cp4.1LG06g09060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATTCCAAAAGGCTTTGTCATAGGTTCCAATAAGGGCACACATGCCAATGCGACAATATTTCGTCTCACCTCTCTGTCCGCCACCCGCAACCCTCCAAGAATGTTCGATGTTTGAGCCTGATCATCATTCCAGCTCTCTCTCGCTTGTCATTTTTGTTTCTACTGATGCGATGGGGCGATTGGATCACAGGAAACGAACTACCATTTGGAGCTTGCTATGGTTGACAAAATTTGCCATTCGCTTATAAGGTGTTTGATGAAATGACTCGATGAATTTTCACTCACCCTTTTCATATTCTGTCTCTTGGGTTTCACTTTGATGCTTTTTGTTGATTGTTTGTTCACATTCGTTTGTGGGTTTTAAGTTTTATCAAGAGATGCCTTGCTTAACATGTTGCTAGAACTAAAAATGCATGCTGTTTTGTTGTCTTCACTATGTGACTTGTTAAGATTGAAGCCTTCTTTAAGCTTGAACGATTCATTAGTGATTTTCGAATGGATTATGAACAACATTAGTTGCCGTGATAAAACATGGATGACCGGTATTGTTTATAGCTTCATTTGAGAAGTTTGAGAAAAATTGAGGTGCATAGAGATTATGTTGATTAGGATAAATTATTTGTTGAGACGGCCACAATCTGACTGATAATTTTTATCATTAGATTTTACAAGAGAAGTAAATTCAATTTATATCTAGTAGGTATGCAAAATCCTTAATCCACGTTCAACAATGAATACAAGACAACCATACTGTGACAACCTTGTTGAATAGTCTGTTATCGATGAGACAAAAAGGGTACATGAAAAAAGCTCGTCTTAATGTTCACATTAGATCCGTGTTTCTTTTGTGTTTTTCTTCTTTCTTTTTCCATTTCATACGCCTCTTTAGAACAACTTTTACAGTTCTCAATATTCTAGAGAACCAAAAGATGGAAGGAGTATAAACGGATAGAACTTTTCTCTATGTAACTTCCTTAATTTTTTGTCCAAATCATGAGAAGACAAAGACAAAAGTTAAGACATGAGAGAAGGTTAATCATTATCAAGATGACCATGGAAGTGGATAAGCATGGTCCCTTCCCCTCTGGGGGTCCCTACCGTTACAGATTACATTCAACCTTCATATCCAGTCAAATTATGGTAACCCAATAATCAGAAAGCTACAAGCAGCTAAGGTACCCACAGGTTTGTAGCTTATCTTCATCCTTTATAAACTATATTTACTTCATAACTCAATCAACAGAAGAAGATCAAGGAAGGGGGAAGAAGAAGACATGGAAAGACAGAAGAAGATTGTGAAGAAGACAAGGGTAATCAAAGTTAGCTCAGAGGAATCATGGGATTGTTATGTTACAAAAGCTTTCAAACAAGGCTGCCCTGTGAGTCCCTCCCTTACTTTTCATATTTATACTCTTAGTTCAATGTTTGGTGAATTCAGTAATGTGGAAATGAATGTTATCCAAGGTATAAAGGTTGAAATGATGCTCATTTGGAATAATATTGCAGGTTGTAGTGCATTTTAGTGCTAGCTGGTGCACACCCTCAAGAGCCATGAGCCCTTTCTTTGAAGAGCTGGCCTTGCAATACAAATATGTTTTGTTTCTTTCCGTGGATGTGGATGAAGCTAAGGTAATTTTGATAATGGAAGCTAATGTGGATTATCTCTGATATTTAACTTCATCTTAGGCTCGAGTTTGTGTGGAGAAAGTACGAAAAAGAATTAACCAAGTAGAAAATATGGGTTTTGATCGATGGGAGTTCTTGATTGTTGTTTGTGTAATGATAAGTCTTCTCGAGAGTTGATATACGTGAGATCTCATATTGGTTGAAGAGGAGAACAAAGCATTCTTTGTAATTGTGTGGAGACCTGTCCCTAGCATACGCGTTTTAAAATTGTGAGGCTGACGGCGATATGTAACGGGTCAAAAACGGATAATATATGCTAGTGGTGAGCTTAGGCTGTTACAAATGATATCAGAACTAGACACCAACCAGTGAGGACGTTGGACCCCCAAGGGGGGTGGATTGTGAGATCTCACATTGGCTGGAGGAGAATAAAACATTCTTTTTAAGGGTGTGGAAACCTTTCCCTAGCGAGCGTATTTTAAAACCGTGAGGATGACGATGATACGTAACGAACCAAAGCGGACAATATTTTCTAGCCGTGAGCATGGGTTATTACAATGTTATTAGAGCGAGACATCGAGTGGTGTGTCCGCGAGGACGTTGGACCCCTAAGAGAAGTGGATTGTGAGATCTCACGTTGGTTGGAGAGGGAATATAACATTCTTTATAAGAGTGTGGAAACCTCTCCCCTAGCAGACGCGTTTTAAAATCGTGAGGCTGACGACGATACGTAACGGGCCAAAGCAAACCATATCTACTAACGGTTGGCTTGAACTGTTACAATATATAATATAACTTAGAAGTGATTGAGAATTTGTTCGATTATGTTTTCTTTGATCTAAAATTATTTTATCATATAAACAGGAGGTCGCATCCAAGTTGGAGATAAAGGCGATGCCCACATTTGTATTGATGAAGAATGGAGCCCCAAACTATAAGCTTGTTGGAGCCAACCCAGTTGAGCTGAGTAGAAGGATCAAGGGCTTCATATATGGCTAAGTATCAAAAGACACCAAGAAGCACATTTGCCTTTAGCCTTGAAACCATTCAACTTTTAAGTTCATATTTCTTCAATTCTTGGTGGTATTGTTATTGTCTCTTAGTTTTTGGAGAATGAATTACTTCCCACATAATATGATCCCAATCGGTGTCTATTTGGGTCATTTTCTTTTTACGAGACCAAATGAGAGCGATTCTAAAGATAGAGTGACTAAGAAAAGCTTAAAAGAATTGAAAGTCGCTTCCCTTTTTGGTGACTCAATCATAGGAATTTCGTGATTAAACGTGTTTTACTTGGAACAATTTTATGTTGGTTGACCTGTTGAGTTCATGTGAGCAAGTACAAAATATGTCGTGTTGGTTTGTGGTGATAGTTTTCATGTCGAGGAGTAGATAACTTGAGCTTGTTGCATATGAATCATGAACTATTATG

mRNA sequence

ACAAATTCCAAAAGGCTTTGTCATAGGTTCCAATAAGGGCACACATGCCAATGCGACAATATTTCGTCTCACCTCTCTGTCCGCCACCCGCAACCCTCCAAGAATGTTCGATGTTTGAGCCTGATCATCATTCCAGCTCTCTCTCGCTTGTCATTTTTGTTTCTACTGATGCGATGGGGCGATTGGATCACAGGAAACGAACTACCATTTGGAGCTTGCTATGGTTGACAAAATTTGCCATTCGCTTATAAGACAAAGACAAAAGTTAAGACATGAGAGAAGGTTAATCATTATCAAGATGACCATGGAAGTGGATAAGCATGGTCCCTTCCCCTCTGGGGGTCCCTACCGTTACAGATTACATTCAACCTTCATATCCAGTCAAATTATGGTAACCCAATAATCAGAAAGCTACAAGCAGCTAAGGTACCCACAGGTTTGTAGCTTATCTTCATCCTTTATAAACTATATTTACTTCATAACTCAATCAACAGAAGAAGATCAAGGAAGGGGGAAGAAGAAGACATGGAAAGACAGAAGAAGATTGTGAAGAAGACAAGGGTAATCAAAGTTAGCTCAGAGGAATCATGGGATTGTTATGTTACAAAAGCTTTCAAACAAGGCTGCCCTGTTGTAGTGCATTTTAGTGCTAGCTGGTGCACACCCTCAAGAGCCATGAGCCCTTTCTTTGAAGAGCTGGCCTTGCAATACAAATATGTTTTGTTTCTTTCCGTGGATGTGGATGAAGCTAAGGAGGTCGCATCCAAGTTGGAGATAAAGGCGATGCCCACATTTGTATTGATGAAGAATGGAGCCCCAAACTATAAGCTTGTTGGAGCCAACCCAGTTGAGCTGAGTAGAAGGATCAAGGGCTTCATATATGGCTAAGTATCAAAAGACACCAAGAAGCACATTTGCCTTTAGCCTTGAAACCATTCAACTTTTAAGTTCATATTTCTTCAATTCTTGGTGGTATTGTTATTGTCTCTTAGTTTTTGGAGAATGAATTACTTCCCACATAATATGATCCCAATCGGTGTCTATTTGGGTCATTTTCTTTTTACGAGACCAAATGAGAGCGATTCTAAAGATAGAGTGACTAAGAAAAGCTTAAAAGAATTGAAAGTCGCTTCCCTTTTTGGTGACTCAATCATAGGAATTTCGTGATTAAACGTGTTTTACTTGGAACAATTTTATGTTGGTTGACCTGTTGAGTTCATGTGAGCAAGTACAAAATATGTCGTGTTGGTTTGTGGTGATAGTTTTCATGTCGAGGAGTAGATAACTTGAGCTTGTTGCATATGAATCATGAACTATTATG

Coding sequence (CDS)

ATGGAAAGACAGAAGAAGATTGTGAAGAAGACAAGGGTAATCAAAGTTAGCTCAGAGGAATCATGGGATTGTTATGTTACAAAAGCTTTCAAACAAGGCTGCCCTGTTGTAGTGCATTTTAGTGCTAGCTGGTGCACACCCTCAAGAGCCATGAGCCCTTTCTTTGAAGAGCTGGCCTTGCAATACAAATATGTTTTGTTTCTTTCCGTGGATGTGGATGAAGCTAAGGAGGTCGCATCCAAGTTGGAGATAAAGGCGATGCCCACATTTGTATTGATGAAGAATGGAGCCCCAAACTATAAGCTTGTTGGAGCCAACCCAGTTGAGCTGAGTAGAAGGATCAAGGGCTTCATATATGGCTAA

Protein sequence

MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG

Homology

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy Swiss-Prot
Match: Q8LDI5 (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-32
Identity = 64/107 (59.81%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 12  RVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVD 71
           RV+K+ S ESW+ YV++A  Q CP+V HF+A WC PS  M+ FFEELA  YK  LFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 72  VDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFI 119
           VDE KEVAS+LE+KAMPTF+ +K+G    KLVGANP E+ +R+ GF+
Sbjct: 63  VDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFV 109

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy Swiss-Prot
Match: Q0J9V5 (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0629500 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-24
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 3   RQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQY 62
           +Q+K V  ++V+KV  EESWD +V +A  +G PVV HF ASWC  S +M+  FEELA  +
Sbjct: 4   QQQKGVGNSKVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELAQTH 63

Query: 63  KYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRI 115
             +LFL VDVD+ + V+SKL +KAMPTF L+K+     K+VGANP E+ + +
Sbjct: 64  PEILFLYVDVDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPDEVKKMV 115

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.6e-19
Identity = 45/103 (43.69%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 16  VSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVDVDEA 75
           ++++ESWD  + +A + G  VV +FSA+WC P + ++PFF EL+ ++  ++FL VDVDE 
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 76  KEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFI 119
            + +S  +IKA PTF  +KNG    KLVGAN  EL +++   I
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSII 130

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-18
Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 2   ERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQ 61
           E  K   K   V  +S++E+WD  + +A K G  V+ +FSA+WC P R ++P + E++  
Sbjct: 12  EEDKIDFKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQT 71

Query: 62  YKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRI 115
           Y   +FL++DVDE  + +S  +I+A PTF  +KNG    KLVGAN  EL +++
Sbjct: 72  YPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANKPELEKKV 124

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-18
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           +E  K   K   V  ++S+E WD  + +A K G  VV +FSASWC P R ++P + E++ 
Sbjct: 12  IEEDKLDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGPCRVIAPIYAEMSK 71

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120
            Y  ++FL++DVD+  + +S  +I+A PTF  +KN     KLVGAN  EL ++++    G
Sbjct: 72  TYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGANKPELEKKVQALADG 131

[Close]

BLAST of Cp4.1LG06g09060 vs. NCBI nr
Match: XP_023535143.1 (thioredoxin-like protein CXXS1 [Cucurbita pepo subsp. pepo] >XP_023535144.1 thioredoxin-like protein CXXS1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240 bits (612), Expect = 8.53e-80
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120
           QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG
Sbjct: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120

[Close]

BLAST of Cp4.1LG06g09060 vs. NCBI nr
Match: XP_022976606.1 (thioredoxin-like protein CXXS1 [Cucurbita maxima] >XP_022976607.1 thioredoxin-like protein CXXS1 [Cucurbita maxima])

HSP 1 Score: 235 bits (599), Expect = 8.20e-78
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           MERQKKIVKKTRVIKV SEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MERQKKIVKKTRVIKVCSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120
           QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELS+RIKGF YG
Sbjct: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSKRIKGFTYG 120

[Close]

BLAST of Cp4.1LG06g09060 vs. NCBI nr
Match: XP_022937040.1 (thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022937041.1 thioredoxin-like protein CXXS1 [Cucurbita moschata])

HSP 1 Score: 234 bits (598), Expect = 1.17e-77
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           ME QKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MEIQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119
           QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY
Sbjct: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119

[Close]

BLAST of Cp4.1LG06g09060 vs. NCBI nr
Match: KAG7024892.1 (Thioredoxin-like protein CXXS1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233 bits (593), Expect = 6.75e-77
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           ME QKKIVKKTRV KVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MEIQKKIVKKTRVTKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119
           QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY
Sbjct: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119

[Close]

BLAST of Cp4.1LG06g09060 vs. NCBI nr
Match: XP_038899306.1 (thioredoxin-like protein CXXS1 [Benincasa hispida])

HSP 1 Score: 222 bits (565), Expect = 1.26e-72
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           MERQKKIVKKTRVIKV SEESWDCYVTKA KQGCPV+VHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MERQKKIVKKTRVIKVVSEESWDCYVTKASKQGCPVIVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120
           +YK VLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAP YKLVGANPVEL +RI GFIYG
Sbjct: 61  EYKSVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPEYKLVGANPVELRKRITGFIYG 120

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy TrEMBL
Match: A0A6J1IHC2 (thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111476952 PE=4 SV=1)

HSP 1 Score: 235 bits (599), Expect = 3.97e-78
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           MERQKKIVKKTRVIKV SEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MERQKKIVKKTRVIKVCSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120
           QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELS+RIKGF YG
Sbjct: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSKRIKGFTYG 120

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy TrEMBL
Match: A0A6J1FFF2 (thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111443459 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 5.64e-78
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           ME QKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MEIQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119
           QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY
Sbjct: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy TrEMBL
Match: A0A5A7TYZ0 (Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00570 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 5.03e-65
Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           MERQKKIVKK RVIKV SEESWD YVTKA  QGCP VVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MERQKKIVKK-RVIKVGSEESWDYYVTKASLQGCPAVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119
           +YK VLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAP++KLVGANP EL +RIK FIY
Sbjct: 61  EYKSVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPDHKLVGANPEELRKRIKAFIY 118

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy TrEMBL
Match: A0A1S3BYV9 (thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103494949 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 5.03e-65
Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           MERQKKIVKK RVIKV SEESWD YVTKA  QGCP VVHFSASWCTPSRAMSPFFEELAL
Sbjct: 1   MERQKKIVKK-RVIKVGSEESWDYYVTKASLQGCPAVVHFSASWCTPSRAMSPFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIY 119
           +YK VLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAP++KLVGANP EL +RIK FIY
Sbjct: 61  EYKSVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPDHKLVGANPEELRKRIKAFIY 118

[Close]

BLAST of Cp4.1LG06g09060 vs. ExPASy TrEMBL
Match: A0A6J1CCP8 (thioredoxin-like protein CXXS1 OS=Momordica charantia OX=3673 GN=LOC111010298 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 7.08e-63
Identity = 99/120 (82.50%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MERQKKIVKKTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELAL 60
           ME  KK+VKK+RVIKV SE SWD YV KAFKQG PV VHFSASWCTPSRAMS FFEELAL
Sbjct: 1   MEGHKKVVKKSRVIKVGSEGSWDYYVAKAFKQGFPVAVHFSASWCTPSRAMSHFFEELAL 60

Query: 61  QYKYVLFLSVDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFIYG 120
           +YK V+FLSVDVDE K+VASKLEIKAMPTFVLMK+GAPN+KLVGANPVEL +RI GFIYG
Sbjct: 61  EYKGVVFLSVDVDETKDVASKLEIKAMPTFVLMKDGAPNFKLVGANPVELRKRINGFIYG 120

[Close]

BLAST of Cp4.1LG06g09060 vs. TAIR 10
Match: AT1G11530.1 (C-terminal cysteine residue is changed to a serine 1 )

HSP 1 Score: 137.9 bits (346), Expect = 5.4e-33
Identity = 64/107 (59.81%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 12  RVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVD 71
           RV+K+ S ESW+ YV++A  Q CP+V HF+A WC PS  M+ FFEELA  YK  LFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 72  VDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFI 119
           VDE KEVAS+LE+KAMPTF+ +K+G    KLVGANP E+ +R+ GF+
Sbjct: 63  VDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKRVDGFV 109

[Close]

BLAST of Cp4.1LG06g09060 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 95.1 bits (235), Expect = 4.0e-20
Identity = 45/103 (43.69%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 16  VSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVDVDEA 75
           ++++ESWD  + +A + G  VV +FSA+WC P + ++PFF EL+ ++  ++FL VDVDE 
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 76  KEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFI 119
            + +S  +IKA PTF  +KNG    KLVGAN  EL +++   I
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSII 130

[Close]

BLAST of Cp4.1LG06g09060 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 95.1 bits (235), Expect = 4.0e-20
Identity = 45/103 (43.69%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 16  VSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVDVDEA 75
           ++++ESWD  + +A + G  VV +FSA+WC P + ++PFF EL+ ++  ++FL VDVDE 
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDEL 87

Query: 76  KEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRIKGFI 119
            + +S  +IKA PTF  +KNG    KLVGAN  EL +++   I
Sbjct: 88  SDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSII 130

[Close]

BLAST of Cp4.1LG06g09060 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 12  RVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLSVD 71
           +VI   + E+W+  + KA +    VVV F+ASWC P R ++PFF +LA +   VLFL VD
Sbjct: 7   QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVD 66

Query: 72  VDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRRI 115
            DE K VAS   I+AMPTF+ +K G    K+VGA   EL   I
Sbjct: 67  TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

[Close]

BLAST of Cp4.1LG06g09060 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 10  KTRVIKVSSEESWDCYVTKAFKQGCPVVVHFSASWCTPSRAMSPFFEELALQYKYVLFLS 69
           K +V  VS  E W+  +T+A   G  +VV+F ASWC PS+ + P ++ELA  Y  ++F++
Sbjct: 39  KGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIFVT 98

Query: 70  VDVDEAKEVASKLEIKAMPTFVLMKNGAPNYKLVGANPVELSRR 114
           +DV+E  E + +  + A PT V +K+G    KLVG +  EL ++
Sbjct: 99  IDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQKK 142

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g09060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDI5	7.6e-32	59.81	Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=...	[more]
Q0J9V5	2.6e-24	50.00	Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g...	[more]
Q9C9Y6	5.6e-19	43.69	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
Q9AS75	3.7e-18	39.82	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]
Q0DKF1	4.8e-18	38.33	Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S...	[more]

BLAST of Cp4.1LG06g09060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535143.1	8.53e-80	100.00	thioredoxin-like protein CXXS1 [Cucurbita pepo subsp. pepo] >XP_023535144.1 thio...	[more]
XP_022976606.1	8.20e-78	97.50	thioredoxin-like protein CXXS1 [Cucurbita maxima] >XP_022976607.1 thioredoxin-li...	[more]
XP_022937040.1	1.17e-77	99.16	thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022937041.1 thioredoxin-...	[more]
KAG7024892.1	6.75e-77	98.32	Thioredoxin-like protein CXXS1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038899306.1	1.26e-72	92.50	thioredoxin-like protein CXXS1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG06g09060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHC2	3.97e-78	97.50	thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111476952 PE=4 ...	[more]
A0A6J1FFF2	5.64e-78	99.16	thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111443459 PE=...	[more]
A0A5A7TYZ0	5.03e-65	88.24	Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BYV9	5.03e-65	88.24	thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103494949 PE=4 SV=1	[more]
A0A6J1CCP8	7.08e-63	82.50	thioredoxin-like protein CXXS1 OS=Momordica charantia OX=3673 GN=LOC111010298 PE...	[more]

BLAST of Cp4.1LG06g09060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11530.1	5.4e-33	59.81	C-terminal cysteine residue is changed to a serine 1	[more]
AT3G08710.1	4.0e-20	43.69	thioredoxin H-type 9	[more]
AT3G08710.2	4.0e-20	43.69	thioredoxin H-type 9	[more]
AT3G51030.1	1.9e-17	46.60	thioredoxin H-type 1	[more]
AT2G40790.1	1.6e-16	38.46	C-terminal cysteine residue is changed to a serine 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..119 e-value: 3.5E-32 score: 112.9
None	No IPR available	PANTHER	PTHR10438:SF392	THIOREDOXIN-LIKE PROTEIN CXXS1	coord: 1..118
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 28..118 e-value: 3.58556E-29 score: 99.1696
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 15..113 e-value: 3.1E-22 score: 78.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..119 score: 10.635408
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 10..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g09060.1	Cp4.1LG06g09060.1	mRNA