CsGy6G006030 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G006030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	chromo domain-containing protein LHP1-like
Location	Gy14Chr6: 5324274 .. 5332916 (-)
RNA-Seq Expression	CsGy6G006030
Synteny	CsGy6G006030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCAATTCGATTACATTTATGAGTAATGAAATTTAACTAATTTTGTTTACAAATTTGTTAACACGGCCCTAGTGTGACGGAATATAAATCTCAAACACAAAGTTGATTCAGTAGTTATCAAACGGAGAGAGAGAAAATCAAGTAATTTCTCCTTTCAATTCACGCTATATCATCGTAATCTACAATTTGTTCCACCAACAAAATCAAAGTATAACCGCCTTGAACCTCAAGAAGGAAAGGACTGGAAGTTTGGAAAGAGAGGAAGAAACCCATATTTGATTTTGGCAGAAAATTGGGAATTTCAATATACGATTCATATAGAAAGGGGGGAAAGTTTAATAAATGCGGCAGCTCAGGCTATTCAGTCTCAGCTCCCTTTTGTAGTGACATTTGTCTTCGTTTTGGAAAAATAAAATTCTGTGAGCATGTGTATTTTTTAGAGAGAGGGTTTTAGGATGAAATTCAAAGGGGGAGTAGGGAGGAAGAAAAGTTCAAGCCCTTCAATGGAGGTTGCTGTGGGTTCAATTCAGGACGCCATGGATAGTGGTGAAGTTCATGGAGGCAACTCGGATTACGCGAATGTGAACATCAACAACAAACCCATTAATGGCTCCGAGCCTTCGAATTCCCATTTGACAGAGACCCATCAAGATCAAAACCTAGAAGAGGTTGATGATGATGATGGCGAAGGGGATGAAGAAGATGAACAGGATGGAGATGAGGCTGCTTTTGCTTCTCAGAGAACTAATCTCGATGATGGGTTTTATGAAATTGAAGCAATTCGTCGAAAAAGGGTTCGTAAGGTATTCAATTTTACTTCTACTTTGGCTTTCTAGTTTCTTTATTTATAGTTTAGCTTTTTTTCATTCGGATTGTGAGAATGATCGGTTTATGAAAGTTTGTACATTTACTGATTTTGGGGATTTCTTCTTGTGCTGCTGTGCTGTGGGAATGGTTGATTGGGAAAACAGGGCCAGCTTCAGTACTTGATCAAATGGTAATTGTCTCATCTCAACTCTGTTGTTCATTTACCTTGGTTTCTTTGAGCTTGAACGTGATAGCTCAGATTACTAACCAAACCAAGCTTTCCTGAAGGCGTGGCTGGCCGGAGACGGCTAATACTTGGGAGCCCTTGGAGAATCTCCATACATGTTCAGATTTCATCGAGGCGTTCGAACAGAGGTATTTATTCTCTTTTATTTACTTCAGCGTTATTTTGTTGGTAGCTTGAGGAAGCATTATTTGGCATGCTATGGTGATAGTCTATGCTATAATGCTTTTGAACTTTGATTTCCTTTATGAAGTTTAATGACGGGAAAACAGCGGAAACGGAAGCGAAAACATGGGGTTGTTCATACTCAAACCAAGAAAAGGCAGCACCAGCAGCGAGGCAGTTTTTCAGCTTACAATGTCACAGATGTTGAAATCAGTGTTGTTGATCAACGTCTGCCCTCTGCTCCTTTAAACATGTCTAGCTTGACTAATCCTCATGCTCATTCACAATCACTAGTTTATAATCACGAAGGAGAAAAGAATGGAGATGTAACTGCTATTGAAAGAGGCAAGCAAACCGATATTGATAATATGGGCAGGAAAGCTACTCAACGATCTGAATGGAAGAAAGATGAACATGAGTATGACCCTAAACTCAGTGAGCTTAAGGCAACAGTATTAACAAATATAGCCATTACCGATAAGCATGTAATCAATTTTCAAGATTCCAGGGCAACAGAGAACAATGGCTCTGCAGCTGGTCTTTCTAAAGGTGCCTTTGTGGAACCAGTTACTGATAATCGGTGCACTGGGGCTAGGAGAAGGAAGTCTGGTTCAGTTAGAAGGTTTAGACATGATTCAACTTTATCTGCACTGCCTAGGTCTCAAAATGCAGAATTGACATTAGCTGTTGTAGAATCTGGTGCCAGAGTGGAACCGATAGGGGTTGAGAATTCTGGATATCATGGAGAAAGTTTAAGTCGTAATAACAAGACTGATGACGCCAGAAACGAAATGAGTATCACCAAGATTATTAAACCGTTAGGGTATTCAGCTTCTGTGTCAAACAACATGCAGGATGTGTTGGTAACTTTTGTGGCCATGAGGTATGTCATCTTTGTCTTTCCTTTTCATTTATGCTAAATCAACTTTCTAGGGTCCGGAGGATTTATCCGTAGGACTATCCATTAGAAGTAGGATCCCCATTTTTTCTGACTGTGGATGCGAAGTTTGTAAACTTTTAATTTCAACCCTATTCTATAAGCCATGAGGTCGTAGGATGAATACAAAACTTCAGTTTCCATTTCATGCGTTGCCAAATATGTATAACCTCATTTAAAGAGAGAGAGAGAGAGAATCAAATTGAGACATTTTTTAGTTCTTTCAAAAGTAAAGGATATCTTTTAATAGGTAAGCAGGTCATTTTTGGCCAAATCTAGCATATCGGTTTGAGAAACTTTCAAGACCAATACTGAAACTGATACTAAAAAGATGGAACCAAGGCCATCTTAGCTTTGGTTTTTCACCTTTGAATCCATGTAGTTTATTACAGATATCCTCTATTAAGCACACAATTTATTAACTCTGAGTATGTGATATAGAATACTGCTCTGCTTGCATGTGAATGTCTGAAAGAGATTAGTTTCTGTTTTTGTATATCTTGGAGAAAATGTTAGTTATTATATGGTTTAAGAGTAAATGAGATTGTTGATTCCAGCCACGTAACTTGGGTATTAAAGTCACCAACTATTAGTTTCTTCTGAATCATTAGTTTTGAGGTTTTTCTTGCATGTTAAGCATTTCAATTTTGGACATGTTTTTTCATGTACCTCTTAACCAGAAAATATATTTGCTTGTGTCTTGTTTCCTTTCTGTGGTGTGTGTGGATTATTTGATTGGAAAGTTAGTGTCTTTGGATTTAAAATGAGTAAATTCGAAATTTGACATTTTTCACATTGCTAGATTTATTTATTTATTTATTTATTTTGAGGGGGAGGGAGGAGTAAAGTATAAAGCTTAAGCATGAGATGGCAATGGCACACCTTGGTTAATCTCATAGGCCATACTACCAGTATTAGGAAACACTAAACTAACATTCTAAGGAGATGATCACTACCATTTGAACGCATGGGGTTATATCTTATTTAATTGAAACAATTTTCAGCCGTTTAACATTTTGTGCATAGTGTTTGTCTTGCATAGATGTTCAATTAGCCAAATGATTAATATGTAAGATTCTAGGTTAATTAACAAATTTAGTCCTTTAACGTTGGAGTTTTCTCTTTGATCTCTGAACTTGGCGTTCATCAAAAAAAGAAAGTAGACACAGAATGCAAAGTTCAGGTGTGAACTTGTAATTTAACCAAAATTCTATCTAAAGAACATTCATCTTCTAAAACACCTGGTCAAAATATATCCGGCAGTCTTTAAAAAACACATATACAATATCAGGCTCTTTTCTAAATACTATATTTTCTGGTTGAACCTTTTGTGTTTACTTTTGAAATAAAATAAACATTTCTAAAATAATTTTTGAACTAAATATTCATGCTACTGTATATTCCATACTCTGGTACATGAAAATTGTTATGCATTATTGAGTCGGGAAACTGATTTCTGATTACTGTGGAAACTAAAAACATGTAAGTATGACTCCTTTGAAATATATCTCTCAAGATTGTTATCGACATAAACCAACCAGTCTTGGGAGCCCTGTGTTTTTGACGTTTATGGATGAAAACAAAAATCTTGTGTCAGTCTCTTCCATTACGAAATGACAATTTTTTTTTTCTTTTCGATATTTTAGGTCTGATGGAACAGAAGTGGTGGTTGACAACAAATTTCTCAAGGCTATCAATCCCCTATTGGTAATTGGTTTTGTTCTTCACTGTATTATACTTTTGAACTGCCTTTAACAATGCTAATAGTTTTTCCTTCGATTCTAACTGTTGTGTTAACTAAAATCAGTTGATCAACTTCTATGAGCAACATCTACGCTATACTACCAGATCATAAATTGCAGATCTATGAACGGTACGACTTATCAGGATCCCTATTTTGTTAATTATTTACACTTTAGATCCATTTGTACTGCCTCTTGGTGCTCAAGATCGATTAGTAAGGAGATGATTAAGCAAGGTCTACAAATATTTAGCCATAACAGTATCCTTTCATCTACGGTCAGGCTGTGCAGAACAGAGATTAGAAGTAAGAGGATTACAATGATGAAATTAATGTTTTTTAAGTAACTGTCTTGTTCTAGGTTTTGTACATATTACCTTTCTGTTTCAATCTCCTTGCAATCAATGCACTTGTTTAGCAATGAATAGAATTGATTATAACCTTTGGAAGGGTCCTTAGGGAGTCAATGCCATAGTTATGTTGATTGCATATATATAATAATTTTTCTTCTGAAGTTTGAGAAAGATGCGATCCTATGATTTCTTGAGGGTTTTCCATTCATTTTGGCGCATTCAAGGAAATCATGTCGAAGTTTACCCATAAAAGAGCAAATTTTTTGTTAGAGATGGAGAATCAACCGTATATGTTATTTACACAACTAGAAGAATCAACTGGCGTTCTTTGCTTGTGCTAGCAATGAAACTTTGCAGTCATGGTGAATGTTAGCTTCAGGCTAGTATGGCATTTTAGTTCTCAAATATTGTGTCCTGCTTAGCGGTTTCCTCTTTCTCGTCTTCCCTCTCAACCCAGGCGACACTGCAATTTGAAATGTTTAAAGCAACTGGTAGTCTCTCTTTCTCACTCAGATCTTGGATTACTTTTCTGCTATGGTTTTTATTTAAGTGAATGTTCACTGTGGGGTTAAAATATGTAGGCTAATGTAAGGCCAAGATGGTTTATTGGACAAAGCATAGTTCTATCTATGTGTGTAGGGGCTTTGAGAGCTTGAATTTGGAAGATGAGAATTAATTTTACGAAACATATGAGATGCTTGTTTTCAGAGTAAAGGGAATGAAGTTTTACAATTGGAGTGAAGGATCTACACACCATTATAGCTTTTGTAAGGTTTACTTTGAGATATATTTGAGTTTCATTTTTAGTTTTTCTCATCAACATCAAAGGTTGATCTGATGATTCATTGGATAAAATGTTAATAAAAGCATATAATAAAGAGTAATTTACAAGCTTTATCCTTGAACTTTAGAGTGGTTTCTATTGGGTAATAACTGACCTTCAAAATTGTTTAATAAGTTTTCAATTTTGCTTTCAATTGTTTAGTCCCTCAAGTGGGCCTTTTCTCTTTTGTTCAAGTTTGTAACTTTATTCCTTATGCTCTTATTCAAAAGGCTACTGATTCCATCTCTTTTGCACCTCCATTTTTGTAGAGAATGTTATGATTAAGTTTTATCTGTTAAAAAAAATCATTACGCTTTCAATTATGAGTACAATAAATTTCAAAATTTTCAATTTTTGGTCTAATAATGAGTCTTTATGTTTTTTTTTTAAAAAAAAATTATAAATTTAGGTACGGGTGAATGTTTAAGATTTTATAAAATGAGCTAATCACAGAGTGAGAGTTAGTTTAGCTTAAAGATATTTGACATCACTTTTTTTTTTTTTTTCGAGGTTAGTGGTCTAATATGTGAAATCTATGTTAAATAAATTTCAAATTTTTTGAATAGGTTAGTGGGTTATTATAAGTGAAATAGAGAATCTTATAATTTGGAACCACAAAAACGCTTTTAGAAATTTAGGAATAAATATAGTTAGTACATGTGTTGAGAGATTATGAAATGATTAAAATTATCATTTTTTATGTTTAAAGTTTCCTTACAATTGAAAAAAAAAAAGAGAAGAAAAACTAACATAACATTAAGAGAGATTATGAAATGATTAAAGTTATCATTTCTTTTTATGTTTGAAATTATCATTACAATTGAAAAAAAAAAAAAAAGGAATGAAAAACTAACATAACATTAAGAAGAAGCATATAATCATACGCGGTTAGAGGTTCGATTACAATACCTTTTAAAAAGAAAAAAACAATACCTTTTAAAAAGAAAAAAACAAGTATGTTTAATTTGCATTTTTTCACATTTTTAATAACAATAAGTAGAAGCATAATCATCATCCATTTATATTTTAATTAAATCATTCCAATCATCATTTGAGAAAGATTAAAGCTCGATCGTTTAAAATTTTAAAGATGCAAAGCAATTCAAGGAATAAATCTAAGAAGGCATTGCTACAAAACAAAGCTACTTTAGGAACAACATTTTTCTGGTATATAGTATACACAACAACCTTAATAAGAACAACCTCTTAATTTATCAACAGATGAATGCAGCCAATTACTTGTAATCACCAACTGATGTAAAAACTTGGAATGGATCAAACATTTTTGAAGAACTCAACTGTTAACTTATCATAATACAAATAACCAGTTGAAGAGATACAACAGCTCAAGAAACAAACAAAAAGAAAGGAATTGGAAAAACACAATTCCAACAGACTAGCTAAAGTTAGCTCTTAGGAATGTTCTGTCCTACTATCTTTGCAGGAGCTATACGAAGAAGGTTTCCTGGTTTACCTGGGACGGCTCCTTTGATCATCACAACATTAAGGTCTTCATCGATCTTTACAATCTTGAGTTTTCTGATCTTTCTCTTGGTTCCTCCCATCCTTCCAGGCATCTTCTTTCCCTTGTAAACACGCCCTGGTGTAGTTCCTGCACCGATCGATCCAAGTGCTCTGTGGCTCTTTGAACCGTGGCTCATTGGACCTCTTTTGAAGTTGTGCCTCTTGATTCCACCTAGAGAAGAATTATAGAGAGAATGATACAAGAAACCAGTTAGAGAGTAGTGTTGAAAGGAGGTGGAGAGCACATAGAATGGTTAAAATTTAGGTTAAGTTACAAAGAACATCCCAAACTTTGCTGTTTGTTTAAAAAATAAAAAGTTGCAATAATACTCTTTGACTTTCTGTAAACGTTTCAAAACTACCCTAGAAGTAGAAATGAACTGCATATAAAAACTGAAACCCACAACAACGGAAATGTAGATCTGTTACACCATTAGGTCACTGCCACAATGTTCCATGTACAAGTTTATCCAAAATTATAAAGGATTTCTATTGCATGAGTATTTTTGAAACGCCTACGAAAGATCGAAGGTTATATTGCAATTTTTGAAAGAATAAGATGGTTGGTGAAACAAACTTTCTATGGTCCGTTTTCTTCTAACTTTATAATAACGTGGGTCTTGTAAATCAAATAGGTGTGTAAGTTTGGGGTTTGAGTACATATTTAATGATAAAAACCTACCATAAAGTTTCAACTTAAGCTCTCATGTCTAATGGTGATTTAATAGAGCATAAGATGTAAGCACAATCTCGTGGAGTCTAGCATGACAAGGGATGACAAAGAATGTGTGTTGGTCAACCAAGGTAGCACGGGCACATCCTTATACCCACACAAAATTAGCAAATATTTGCACTCATAAAACTATCATATCCTCACATTCAATACTTGGGGAATGGAAATCTAAACAGCTTCTTTCATGGAAGACTGGTTCAGGCTTTGAATAGATATGCCATTGTGCATTCAAACATCAATGAAAATTCATGTTTAATCCTTCCTGAGGAAGCCTAAATTCAATTCTAACATTATGCAGGCACAGGGAAAAAAATGCCCTAGATTCAACTCCAACATTATGCGCAGGCACAGAACAAGAACCATAAGCTCCAAGGAAAACAGGGAGGCGAGGCAATTTCGTAGCTATGAAATAAACACAGATTTCAAACAGAAAAAGCAAGAAACTCAAAAACCTTGAAATCCCTTTCCAATTGTAGTGCCCGAAACATCAACCAGGTCCCCCTCCTTGAAAAGTTCATTGAAAACGAGGCGCTGATTGGGCTCAAATGCATCAACAGACTCAAGGCGAAACTCCTGCAAATGGCGCATTGGAATCGCTCCAGCTTTCTCAAGATGCCCCAATTCCGGTTTCGTCAATTTTCGATCCCTAACCCTACGGTAGCCAACCTGAACGGCACCGTAGCCGTCAGTCGCGTCCGTCTTAACCTGGGTGACGATGTTGCCTTCCTTGAAGCCGACCACGGTGACAGGGACAACCTTGCCATCTGGTTCAAAGAAGCTCATCATACCGAGCTTAGTGGCCATAACGCCAATGCCAGCCTCCATGCTCATACAAACGGAGAGGCCATCGCTAGGACGTCTGGTGGTTGGCCGTGTTGGAAAATGGAAACGAAGGTTGTTTTTGTGGTGGGATTTGAGAGGAAGAGCGAGGAAAGAAGTTCTGAGTGTGAGAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGATTGTTAGTGAAAATTGGATGTTTGGTTGAGGCAGAAGCTGATGAAAATGAAATGATAGACATTTCTTCTTCTTCAAAGGTTTCAATGACTCATATGAAGATGAGGATGACGAAGAAGAAGAAGATGAAGGAAGCTGAAGAAGAAGGAGGTGGTTCTTCTGGGATTGAGAGGACTCTCCCTTTTTCTTATCCGCTTATATTTTCCCTCCATTCTTAAAAATAAAACAATAATACCAAGATAAATGGTCAAAAATAAAAATAATAATATTGTGATGTTTATTTACATTTTTTAGTATATTTATAAACACAACAATTCTAAGTTAAATTAG

mRNA sequence

CGCAATTCGATTACATTTATGAGTAATGAAATTTAACTAATTTTGTTTACAAATTTGTTAACACGGCCCTAGTGTGACGGAATATAAATCTCAAACACAAAGTTGATTCAGTAGTTATCAAACGGAGAGAGAGAAAATCAAGTAATTTCTCCTTTCAATTCACGCTATATCATCGTAATCTACAATTTGTTCCACCAACAAAATCAAAGTATAACCGCCTTGAACCTCAAGAAGGAAAGGACTGGAAGTTTGGAAAGAGAGGAAGAAACCCATATTTGATTTTGGCAGAAAATTGGGAATTTCAATATACGATTCATATAGAAAGGGGGGAAAGTTTAATAAATGCGGCAGCTCAGGCTATTCAGTCTCAGCTCCCTTTTGTAGTGACATTTGTCTTCGTTTTGGAAAAATAAAATTCTGTGAGCATGTGTATTTTTTAGAGAGAGGGTTTTAGGATGAAATTCAAAGGGGGAGTAGGGAGGAAGAAAAGTTCAAGCCCTTCAATGGAGGTTGCTGTGGGTTCAATTCAGGACGCCATGGATAGTGGTGAAGTTCATGGAGGCAACTCGGATTACGCGAATGTGAACATCAACAACAAACCCATTAATGGCTCCGAGCCTTCGAATTCCCATTTGACAGAGACCCATCAAGATCAAAACCTAGAAGAGGTTGATGATGATGATGGCGAAGGGGATGAAGAAGATGAACAGGATGGAGATGAGGCTGCTTTTGCTTCTCAGAGAACTAATCTCGATGATGGGTTTTATGAAATTGAAGCAATTCGTCGAAAAAGGGTTCGTAAGGGCCAGCTTCAGTACTTGATCAAATGGCGTGGCTGGCCGGAGACGGCTAATACTTGGGAGCCCTTGGAGAATCTCCATACATGTTCAGATTTCATCGAGGCGTTCGAACAGAGTTTAATGACGGGAAAACAGCGGAAACGGAAGCGAAAACATGGGGTTGTTCATACTCAAACCAAGAAAAGGCAGCACCAGCAGCGAGGCAGTTTTTCAGCTTACAATGTCACAGATGTTGAAATCAGTGTTGTTGATCAACGTCTGCCCTCTGCTCCTTTAAACATGTCTAGCTTGACTAATCCTCATGCTCATTCACAATCACTAGTTTATAATCACGAAGGAGAAAAGAATGGAGATGTAACTGCTATTGAAAGAGGCAAGCAAACCGATATTGATAATATGGGCAGGAAAGCTACTCAACGATCTGAATGGAAGAAAGATGAACATGAGTATGACCCTAAACTCAGTGAGCTTAAGGCAACAGTATTAACAAATATAGCCATTACCGATAAGCATGTAATCAATTTTCAAGATTCCAGGGCAACAGAGAACAATGGCTCTGCAGCTGGTCTTTCTAAAGGTGCCTTTGTGGAACCAGTTACTGATAATCGGTGCACTGGGGCTAGGAGAAGGAAGTCTGGTTCAGTTAGAAGGTTTAGACATGATTCAACTTTATCTGCACTGCCTAGGTCTCAAAATGCAGAATTGACATTAGCTGTTGTAGAATCTGGTGCCAGAGTGGAACCGATAGGGGTTGAGAATTCTGGATATCATGGAGAAAGTTTAAGTCGTAATAACAAGACTGATGACGCCAGAAACGAAATGAGTATCACCAAGATTATTAAACCGTTAGGGTATTCAGCTTCTGTGTCAAACAACATGCAGGATGTGTTGGTAACTTTTGTGGCCATGAGGTCTGATGGAACAGAAGTGGTGGTTGACAACAAATTTCTCAAGGCTATCAATCCCCTATTGTTGATCAACTTCTATGAGCAACATCTACGCTATACTACCAGATCATAAATTGCAGATCTATGAACGGCACAGGGAAAAAAATGCCCTAGATTCAACTCCAACATTATGCGCAGGCACAGAACAAGAACCATAAGCTCCAAGGAAAACAGGGAGGCGAGGCAATTTCGTAGCTATGAAATAAACACAGATTTCAAACAGAAAAAGCAAGAAACTCAAAAACCTTGAAATCCCTTTCCAATTGTAGTGCCCGAAACATCAACCAGGTCCCCCTCCTTGAAAAGTTCATTGAAAACGAGGCGCTGATTGGGCTCAAATGCATCAACAGACTCAAGGCGAAACTCCTGCAAATGGCGCATTGGAATCGCTCCAGCTTTCTCAAGATGCCCCAATTCCGGTTTCGTCAATTTTCGATCCCTAACCCTACGGTAGCCAACCTGAACGGCACCGTAGCCGTCAGTCGCGTCCGTCTTAACCTGGGTGACGATGTTGCCTTCCTTGAAGCCGACCACGGTGACAGGGACAACCTTGCCATCTGGTTCAAAGAAGCTCATCATACCGAGCTTAGTGGCCATAACGCCAATGCCAGCCTCCATGCTCATACAAACGGAGAGGCCATCGCTAGGACGTCTGGTGGTTGGCCGTGTTGGAAAATGGAAACGAAGGTTGTTTTTGTGGTGGGATTTGAGAGGAAGAGCGAGGAAAGAAGTTCTGAGTGTGAGAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGATTGTTAGTGAAAATTGGATGTTTGGTTGAGGCAGAAGCTGATGAAAATGAAATGATAGACATTTCTTCTTCTTCAAAGGTTTCAATGACTCATATGAAGATGAGGATGACGAAGAAGAAGAAGATGAAGGAAGCTGAAGAAGAAGGAGGTGGTTCTTCTGGGATTGAGAGGACTCTCCCTTTTTCTTATCCGCTTATATTTTCCCTCCATTCTTAAAAATAAAACAATAATACCAAGATAAATGGTCAAAAATAAAAATAATAATATTGTGATGTTTATTTACATTTTTTAGTATATTTATAAACACAACAATTCTAAGTTAAATTAG

Coding sequence (CDS)

ATGAAATTCAAAGGGGGAGTAGGGAGGAAGAAAAGTTCAAGCCCTTCAATGGAGGTTGCTGTGGGTTCAATTCAGGACGCCATGGATAGTGGTGAAGTTCATGGAGGCAACTCGGATTACGCGAATGTGAACATCAACAACAAACCCATTAATGGCTCCGAGCCTTCGAATTCCCATTTGACAGAGACCCATCAAGATCAAAACCTAGAAGAGGTTGATGATGATGATGGCGAAGGGGATGAAGAAGATGAACAGGATGGAGATGAGGCTGCTTTTGCTTCTCAGAGAACTAATCTCGATGATGGGTTTTATGAAATTGAAGCAATTCGTCGAAAAAGGGTTCGTAAGGGCCAGCTTCAGTACTTGATCAAATGGCGTGGCTGGCCGGAGACGGCTAATACTTGGGAGCCCTTGGAGAATCTCCATACATGTTCAGATTTCATCGAGGCGTTCGAACAGAGTTTAATGACGGGAAAACAGCGGAAACGGAAGCGAAAACATGGGGTTGTTCATACTCAAACCAAGAAAAGGCAGCACCAGCAGCGAGGCAGTTTTTCAGCTTACAATGTCACAGATGTTGAAATCAGTGTTGTTGATCAACGTCTGCCCTCTGCTCCTTTAAACATGTCTAGCTTGACTAATCCTCATGCTCATTCACAATCACTAGTTTATAATCACGAAGGAGAAAAGAATGGAGATGTAACTGCTATTGAAAGAGGCAAGCAAACCGATATTGATAATATGGGCAGGAAAGCTACTCAACGATCTGAATGGAAGAAAGATGAACATGAGTATGACCCTAAACTCAGTGAGCTTAAGGCAACAGTATTAACAAATATAGCCATTACCGATAAGCATGTAATCAATTTTCAAGATTCCAGGGCAACAGAGAACAATGGCTCTGCAGCTGGTCTTTCTAAAGGTGCCTTTGTGGAACCAGTTACTGATAATCGGTGCACTGGGGCTAGGAGAAGGAAGTCTGGTTCAGTTAGAAGGTTTAGACATGATTCAACTTTATCTGCACTGCCTAGGTCTCAAAATGCAGAATTGACATTAGCTGTTGTAGAATCTGGTGCCAGAGTGGAACCGATAGGGGTTGAGAATTCTGGATATCATGGAGAAAGTTTAAGTCGTAATAACAAGACTGATGACGCCAGAAACGAAATGAGTATCACCAAGATTATTAAACCGTTAGGGTATTCAGCTTCTGTGTCAAACAACATGCAGGATGTGTTGGTAACTTTTGTGGCCATGAGGTCTGATGGAACAGAAGTGGTGGTTGACAACAAATTTCTCAAGGCTATCAATCCCCTATTGTTGATCAACTTCTATGAGCAACATCTACGCTATACTACCAGATCATAA

Protein sequence

MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHLTETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQQRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERGKQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNGSAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGARVEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS*

Homology

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BLAST of CsGy6G006030 vs. ExPASy Swiss-Prot
Match: Q946J8 (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 257.3 bits (656), Expect = 3.3e-67
Identity = 179/417 (42.93%), Postives = 236/417 (56.59%), Query Frame = 0


Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TE   ++  E+ D+DDG GDEEDE +G+      +R  LD+GFYEIEAIRRKRVRKG++Q
Sbjct: 67  TEDGDEEEEEDEDEDDG-GDEEDE-EGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQ 126

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQ-RKRKRKHGVVHTQTKKRQH 180
           YLIKWRGWPETANTWEPLENL + +D I+AFE SL  GK  RKRKRK+   H+Q KK+Q 
Sbjct: 127 YLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKRKYAGPHSQMKKKQR 186

Query: 181 QQRGSFSAYNVTDVEISVVDQRLPSAP----LNMSSLTNPHAHSQSLVYNHEGEKNGDVT 240
               S  A   +D   S+ +  LP  P    L+ SSL N    +++   +++ E N    
Sbjct: 187 LTSTSHDATEKSDSSTSLNNSSLPDIPDPLDLSGSSLLNRDVEAKNAYVSNQVEANSGSV 246

Query: 241 AIERGKQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRA 300
            + R  +  IDN              E EYDP L+EL+  V                   
Sbjct: 247 GMARQVRL-IDN--------------EKEYDPTLNELRGPV------------------- 306

Query: 301 TENNGSAAGLSKGAFVEPVTDN------------------RCTGARRRKSGSVRRFRHDS 360
             NN + AG S+G  +    DN                  R  GA+RRKSGSV+RF+ D 
Sbjct: 307 --NNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQDG 366

Query: 361 TLS---ALPRSQNAELTLAVVESGARVEPIGVENSG-YHGESLSRNNKTDDARNEMSITK 420
           + S     P  QN    L  ++S  R+  +G E  G     +LS+  K +    E+ ITK
Sbjct: 367 STSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIE----ELDITK 426

Query: 421 IIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVDNKFLKAINPLLLINFYEQHLRY 451
           I+KP+ ++ASVS+N+Q+VLVTF+A+RSDG E +VDN+FLKA NP LLI FYEQHL+Y
Sbjct: 427 ILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKY 441

[Close]

BLAST of CsGy6G006030 vs. ExPASy Swiss-Prot
Match: Q944N1 (Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-56
Identity = 148/387 (38.24%), Postives = 212/387 (54.78%), Query Frame = 0


Query: 74  DDDGEGDEEDEQ---------DGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIK 133
           + +GEG+E+DE          DGD  A    +  L +GFYEIE +RR+R  KG++ YLIK
Sbjct: 55  EGEGEGEEKDEAPEVVRVEKGDGDGVA-KKVKPKLAEGFYEIETVRRRRTVKGKVYYLIK 114

Query: 134 WRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTK-KRQHQQRG 193
           WRGWPE+ANTWEP  NL +C+D I+A+E+SL +GK R+RKRK G   T    K+Q +   
Sbjct: 115 WRGWPESANTWEPETNLSSCTDIIDAYEESLKSGKLRRRKRKFGATQTHPMIKQQRRFSA 174

Query: 194 SFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERGKQT 253
             + YN   V++ ++++  PS PLN+   T+       LV ++  E N  V  +  G   
Sbjct: 175 PVATYNGPAVKVRIIEEPTPSPPLNVLKATD-------LVDSNGSELNSKVDEVVNGNGL 234

Query: 254 DIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNGSAA 313
            +              ++++E + KLSELK    TN    D              NG   
Sbjct: 235 RL--------------REQNELNLKLSELKGATSTNGNPVD-----------ISGNGLTN 294

Query: 314 GLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGARVEP 373
           G  K    E    +RCTGA++RKSG VRRF+ ++T +    +Q+A        +G  +  
Sbjct: 295 GFPKVNGAEFYQSDRCTGAKKRKSGCVRRFKRETTSAVKDDTQDA-------LAGGPLAT 354

Query: 374 IGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRSDGT 433
              + S  H          DD+++  +IT+++ P+ Y AS SN+M DV VTFVA R+DG 
Sbjct: 355 FMQDGSHNH------VMVADDSKDGYTITQLVNPVSYKASFSNDMLDVSVTFVAKRADGN 395

Query: 434 EVVVDNKFLKAINPLLLINFYEQHLRY 451
            V+VDNKFLK  NPLLLINFYE+++RY
Sbjct: 415 LVLVDNKFLKMNNPLLLINFYEENMRY 395

[Close]

BLAST of CsGy6G006030 vs. ExPASy Swiss-Prot
Match: Q339W7 (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica OX=39947 GN=LHP1 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.9e-39
Identity = 147/446 (32.96%), Postives = 210/446 (47.09%), Query Frame = 0


Query: 52  GSEPSNSHLTETHQDQNLEEVDDDDGEGDEEDE-------------QDGDEAAFASQR-- 111
           G E +   + E  + +  EE +  +GEG+E DE             + G+E+  A+    
Sbjct: 20  GEEEAPVEMDEEGEMEEEEEEEQGEGEGEERDEGEEEEEWEDAEEVEGGEESEQAAAEEE 79

Query: 112 --------------------TNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWE 171
                                 L +G+YEIE IRR+R+RKG+LQYL+KWRGWPE+ANTWE
Sbjct: 80  DSPLVVVEAEAAAPVVDGSPPKLAEGYYEIEDIRRRRLRKGKLQYLVKWRGWPESANTWE 139

Query: 172 PLENLHTCSDFIEAFEQSLMTGKQ-RKRKRKHGVVHTQTKKRQHQQRG--SFSAYNVTDV 231
           PLENL  CSD I+AFE  L + +  RKRKRK            H +RG     A + T  
Sbjct: 140 PLENLSACSDIIDAFEMRLQSPRPGRKRKRKITTTPVAGSNPSHGKRGRPRLDAKSHTRA 199

Query: 232 EISVVDQRLP-----SAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERGKQTDIDNM 291
             +   ++LP         N SS T     +   V  ++  +N     ++ G  + I   
Sbjct: 200 P-APEPKQLPCRTSCRRATNCSSKTVAGLDASGSVVRNQLAQN----IVQEGSSSVISR- 259

Query: 292 GRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNGSAAGLSKG 351
                                 EL  ++       + H++N         + ++  L K 
Sbjct: 260 ------------------TPCQELPLSIRLTDQQNEHHLVN--------GSSNSENLVK- 319

Query: 352 AFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGARVEPIGVEN 411
             V P    + TGA++RKSG+VRRF  +      P     E    VV      E +G   
Sbjct: 320 --VPPSQGGQVTGAKKRKSGNVRRFEQNK-----PTQGQGECGALVV-----AEDVG-ST 379

Query: 412 SGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVD 455
            G  G+      KT+   N + ITKIIKP+ ++A+V+N++Q V +TF A+RSDG EV+VD
Sbjct: 380 EGETGD----KKKTEGCPNRVHITKIIKPVRFAAAVNNDVQQVSITFKALRSDGQEVMVD 415

[Close]

BLAST of CsGy6G006030 vs. ExPASy Swiss-Prot
Match: P29227 (Heterochromatin protein 1 OS=Drosophila virilis OX=7244 GN=HP1A PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-08
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 86  DGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCS 145
           D  E   AS     ++  Y +E I  +RVRKG+++Y +KW+G+ ET NTWEP  NL  C 
Sbjct: 6   DNPETNNASSGAEEEEEEYAVEKILDRRVRKGKVEYYLKWKGYAETENTWEPEGNL-DCQ 65

Query: 146 DFIEAFEQS 155
           D I+ +E S
Sbjct: 66  DLIQQYELS 73

[Close]

BLAST of CsGy6G006030 vs. ExPASy Swiss-Prot
Match: P05205 (Heterochromatin protein 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)205 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-07
Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 86  DGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLHTCS 145
           D  E++        ++  Y +E I  +RVRKG+++Y +KW+G+PET NTWEP  NL  C 
Sbjct: 6   DNPESSAKVSDAEEEEEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNL-DCQ 65

Query: 146 DFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQQRGSFS 187
           D I+ +E S    +++    K     +  K ++ Q R S S
Sbjct: 66  DLIQQYEAS-RKDEEKSAASKKDRPSSSAKAKETQGRASSS 104

[Close]

BLAST of CsGy6G006030 vs. NCBI nr
Match: XP_004145010.1 (chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus] >XP_031743413.1 chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus] >KGN46259.1 hypothetical protein Csa_005559 [Cucumis sativus])

HSP 1 Score: 879 bits (2271), Expect = 0.0
Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL
Sbjct: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG
Sbjct: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS
Sbjct: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of CsGy6G006030 vs. NCBI nr
Match: XP_008460094.1 (PREDICTED: chromo domain-containing protein LHP1-like [Cucumis melo])

HSP 1 Score: 844 bits (2181), Expect = 8.56e-308
Identity = 435/454 (95.81%), Postives = 441/454 (97.14%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MK KGGVGRKKS+SPSMEV VGSIQDAMDSGEVHGGNSDYAN NINN PINGSEPSNSHL
Sbjct: 1   MKCKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANANINNNPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEE DDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLN+SSLTNP+AHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNLSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGR ATQRSEWKKDEHEYDPKLSELKATVLTNIA+TDKHVIN QD+R TENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLS LPRSQ+AELTLAVVESG R
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNKTDDARNE SI KIIKPLGYSASVSNNMQDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS
Sbjct: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of CsGy6G006030 vs. NCBI nr
Match: XP_031743414.1 (chromo domain-containing protein LHP1 isoform X2 [Cucumis sativus])

HSP 1 Score: 806 bits (2081), Expect = 4.75e-293
Identity = 424/454 (93.39%), Postives = 424/454 (93.39%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL
Sbjct: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGRKATQRSEWKKDEHE                              ATENNG
Sbjct: 241 KQTDIDNMGRKATQRSEWKKDEHE------------------------------ATENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS
Sbjct: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 424

[Close]

BLAST of CsGy6G006030 vs. NCBI nr
Match: TYK24517.1 (chromo domain-containing protein LHP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 780 bits (2013), Expect = 1.37e-282
Identity = 403/419 (96.18%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MKFKGGVGRKKS+SPSMEV VGSIQDAMDSGEVHGGNSDYANVNINN PINGSEPSNSHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEE DDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNP+AHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGR ATQRSEWKKDEHEYDPKLSELKATVLTNIA+TDKHVIN QD+R TENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLS LPRSQ+AELTLAVVESG R
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMR 419
           VEPIGVENSGYHGESLSRNNKTDDARNE SI KIIKPLGYSASVSNNMQDVLVTFVAMR
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMR 419

[Close]

BLAST of CsGy6G006030 vs. NCBI nr
Match: XP_038874378.1 (chromo domain-containing protein LHP1 [Benincasa hispida] >XP_038874379.1 chromo domain-containing protein LHP1 [Benincasa hispida])

HSP 1 Score: 776 bits (2003), Expect = 1.04e-280
Identity = 407/454 (89.65%), Postives = 419/454 (92.29%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MK KGG GRKKS+S SMEV VGS QDAMD GEVHGG+SDYANVN NN PIN SEPS SHL
Sbjct: 1   MKIKGG-GRKKSASASMEVVVGSAQDAMDGGEVHGGDSDYANVNTNNNPINVSEPSTSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
            ET QDQNLEE DDD GEGDEEDEQDGD+AAFA+QRTNLDDGFYEIEAIRR+RVRKGQLQ
Sbjct: 61  LETDQDQNLEEPDDD-GEGDEEDEQDGDDAAFAAQRTNLDDGFYEIEAIRRRRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLM GKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMMGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QR SFS YNVTDVEISVVDQRLPSAPLNMSSLTNP+AHSQSLVYNHEGEKNGDVT IERG
Sbjct: 181 QRASFSTYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTTIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQ DIDN+GR ATQRSEWKKDEHEYDPKLSELK TVLTNIAI DK  INFQD+R TENNG
Sbjct: 241 KQADIDNIGRNATQRSEWKKDEHEYDPKLSELKTTVLTNIAIGDKLAINFQDARTTENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGL KG  VEPVTDNRCTGARRRKSGSV+RFR DSTLS +P SQNAELTLAVVESG R
Sbjct: 301 SAAGLYKGGSVEPVTDNRCTGARRRKSGSVKRFRQDSTLSDMPMSQNAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNN+TDDARNE SI KIIKPLGYSASVSNN+QDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNRTDDARNETSIIKIIKPLGYSASVSNNIQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEVVVDNKFLKA NPLLLINFYEQHLRYTTRS
Sbjct: 421 DGTEVVVDNKFLKANNPLLLINFYEQHLRYTTRS 452

[Close]

BLAST of CsGy6G006030 vs. ExPASy TrEMBL
Match: A0A0A0KBN0 (Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078540 PE=4 SV=1)

HSP 1 Score: 879 bits (2271), Expect = 0.0
Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL
Sbjct: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG
Sbjct: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS
Sbjct: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of CsGy6G006030 vs. ExPASy TrEMBL
Match: A0A1S3CBU8 (chromo domain-containing protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC103499007 PE=4 SV=1)

HSP 1 Score: 844 bits (2181), Expect = 4.15e-308
Identity = 435/454 (95.81%), Postives = 441/454 (97.14%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MK KGGVGRKKS+SPSMEV VGSIQDAMDSGEVHGGNSDYAN NINN PINGSEPSNSHL
Sbjct: 1   MKCKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANANINNNPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEE DDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLN+SSLTNP+AHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNLSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGR ATQRSEWKKDEHEYDPKLSELKATVLTNIA+TDKHVIN QD+R TENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLS LPRSQ+AELTLAVVESG R
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGESLSRNNKTDDARNE SI KIIKPLGYSASVSNNMQDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS
Sbjct: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454

[Close]

BLAST of CsGy6G006030 vs. ExPASy TrEMBL
Match: A0A5D3DLL0 (Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00590 PE=4 SV=1)

HSP 1 Score: 780 bits (2013), Expect = 6.61e-283
Identity = 403/419 (96.18%), Postives = 408/419 (97.37%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MKFKGGVGRKKS+SPSMEV VGSIQDAMDSGEVHGGNSDYANVNINN PINGSEPSNSHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEE DDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNP+AHSQSLVYNHEGEKNGDVTAIERG
Sbjct: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           KQTDIDNMGR ATQRSEWKKDEHEYDPKLSELKATVLTNIA+TDKHVIN QD+R TENNG
Sbjct: 241 KQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVINVQDARTTENNG 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
           SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLS LPRSQ+AELTLAVVESG R
Sbjct: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSAELTLAVVESGVR 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMR 419
           VEPIGVENSGYHGESLSRNNKTDDARNE SI KIIKPLGYSASVSNNMQDVLVTFVAMR
Sbjct: 361 VEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNMQDVLVTFVAMR 419

[Close]

BLAST of CsGy6G006030 vs. ExPASy TrEMBL
Match: A0A5A7TEU9 (Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002670 PE=4 SV=1)

HSP 1 Score: 769 bits (1985), Expect = 1.91e-278
Identity = 402/431 (93.27%), Postives = 407/431 (94.43%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MKFKGGVGRKKS+SPSMEV VGSIQDAMDSGEVHGGNSDYANVNINN PINGSEPSNSHL
Sbjct: 1   MKFKGGVGRKKSASPSMEVVVGSIQDAMDSGEVHGGNSDYANVNINNNPINGSEPSNSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TETHQDQNLEE DDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  TETHQDQNLEEPDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQS------------LMTGKQRKRKRKHG 180
           YLIKWRGWPE ANTWEPLENLHTCSDFIEAFEQ             LMTGKQRKRKRKHG
Sbjct: 121 YLIKWRGWPEAANTWEPLENLHTCSDFIEAFEQRYSLLFTSALFCCLMTGKQRKRKRKHG 180

Query: 181 VVHTQTKKRQHQQRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEG 240
           VVHTQTKKRQHQQRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNP+AHSQSLVYNHEG
Sbjct: 181 VVHTQTKKRQHQQRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPYAHSQSLVYNHEG 240

Query: 241 EKNGDVTAIERGKQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVI 300
           EKNGDVTAIERGKQTDIDNMGR ATQRSEWKKDEHEYDPKLSELKATVLTNIA+TDKHVI
Sbjct: 241 EKNGDVTAIERGKQTDIDNMGRNATQRSEWKKDEHEYDPKLSELKATVLTNIAVTDKHVI 300

Query: 301 NFQDSRATENNGSAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNA 360
           N QD+R TENNGSAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLS LPRSQ+A
Sbjct: 301 NVQDARTTENNGSAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSELPRSQSA 360

Query: 361 ELTLAVVESGARVEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNM 419
           ELTLAVVESG RVEPIGVENSGYHGESLSRNNKTDDARNE SI KIIKPLGYSASVSNNM
Sbjct: 361 ELTLAVVESGVRVEPIGVENSGYHGESLSRNNKTDDARNETSIIKIIKPLGYSASVSNNM 420

[Close]

BLAST of CsGy6G006030 vs. ExPASy TrEMBL
Match: A0A6J1KVS2 (chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111499147 PE=4 SV=1)

HSP 1 Score: 686 bits (1771), Expect = 8.81e-246
Identity = 366/454 (80.62%), Postives = 396/454 (87.22%), Query Frame = 0


Query: 1   MKFKGGVGRKKSSSPSMEVAVGSIQDAMDSGEVHGGNSDYANVNINNKPINGSEPSNSHL 60
           MK KGG  RKKS+S S EV +G IQDAMD GEVHGG+SDY ++N NN PING EPS SHL
Sbjct: 1   MKIKGGR-RKKSASGSTEVVMGPIQDAMDGGEVHGGDSDYVDMNTNNNPINGGEPSTSHL 60

Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           +ETHQ+QNL+E D    E DE+DEQDG EAAFA+QRTNLDDGFYEIEAIRRKRVRKGQLQ
Sbjct: 61  SETHQEQNLDEPD----EQDEQDEQDGTEAAFAAQRTNLDDGFYEIEAIRRKRVRKGQLQ 120

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQRKRKRKHGVVHTQTKKRQHQ 180
           YLIKWRGWPETANTWEPLENLHTCS+FIEAFEQSL++GKQRKRKRKHGVVH QTKKRQ  
Sbjct: 121 YLIKWRGWPETANTWEPLENLHTCSEFIEAFEQSLISGKQRKRKRKHGVVHVQTKKRQ-- 180

Query: 181 QRGSFSAYNVTDVEISVVDQRLPSAPLNMSSLTNPHAHSQSLVYNHEGEKNGDVTAIERG 240
           QR +FS YNVTDVEISVVDQRLPSAP+NM SLTNP+A S+S+VYNHEGEKNGDVTAIERG
Sbjct: 181 QRANFSTYNVTDVEISVVDQRLPSAPINMPSLTNPYARSRSVVYNHEGEKNGDVTAIERG 240

Query: 241 KQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRATENNG 300
           +  DIDN+GR ATQR E KK EHEYDPKLSELKAT LTNIAI DK  I+F D+R TENN 
Sbjct: 241 RLADIDNVGRNATQRFEQKKAEHEYDPKLSELKATGLTNIAIGDKLAIDFHDARTTENNV 300

Query: 301 SAAGLSKGAFVEPVTDNRCTGARRRKSGSVRRFRHDSTLSALPRSQNAELTLAVVESGAR 360
            AAGLSK   VE VT+NRCTGA+RRKSGSV+RFR DSTLS LP  QN ELTLAVVES   
Sbjct: 301 LAAGLSKTGSVELVTENRCTGAKRRKSGSVKRFRQDSTLSELPVVQNPELTLAVVESSVG 360

Query: 361 VEPIGVENSGYHGESLSRNNKTDDARNEMSITKIIKPLGYSASVSNNMQDVLVTFVAMRS 420
           VEPIGVENSGYHGE LSRNN+TD+ARNE SI KI+KPLGYSASVSNN+QDVLVTFVAMRS
Sbjct: 361 VEPIGVENSGYHGERLSRNNRTDEARNEPSIIKIVKPLGYSASVSNNIQDVLVTFVAMRS 420

Query: 421 DGTEVVVDNKFLKAINPLLLINFYEQHLRYTTRS 454
           DGTEV+VDNKFLKA NPLLLINFYEQHL YTTRS
Sbjct: 421 DGTEVMVDNKFLKANNPLLLINFYEQHLHYTTRS 447

[Close]

BLAST of CsGy6G006030 vs. TAIR 10
Match: AT5G17690.1 (like heterochromatin protein (LHP1) )

HSP 1 Score: 257.3 bits (656), Expect = 2.3e-68
Identity = 179/417 (42.93%), Postives = 236/417 (56.59%), Query Frame = 0


Query: 61  TETHQDQNLEEVDDDDGEGDEEDEQDGDEAAFASQRTNLDDGFYEIEAIRRKRVRKGQLQ 120
           TE   ++  E+ D+DDG GDEEDE +G+      +R  LD+GFYEIEAIRRKRVRKG++Q
Sbjct: 67  TEDGDEEEEEDEDEDDG-GDEEDE-EGEGEGGQEERPKLDEGFYEIEAIRRKRVRKGKVQ 126

Query: 121 YLIKWRGWPETANTWEPLENLHTCSDFIEAFEQSLMTGKQ-RKRKRKHGVVHTQTKKRQH 180
           YLIKWRGWPETANTWEPLENL + +D I+AFE SL  GK  RKRKRK+   H+Q KK+Q 
Sbjct: 127 YLIKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGKPGRKRKRKYAGPHSQMKKKQR 186

Query: 181 QQRGSFSAYNVTDVEISVVDQRLPSAP----LNMSSLTNPHAHSQSLVYNHEGEKNGDVT 240
               S  A   +D   S+ +  LP  P    L+ SSL N    +++   +++ E N    
Sbjct: 187 LTSTSHDATEKSDSSTSLNNSSLPDIPDPLDLSGSSLLNRDVEAKNAYVSNQVEANSGSV 246

Query: 241 AIERGKQTDIDNMGRKATQRSEWKKDEHEYDPKLSELKATVLTNIAITDKHVINFQDSRA 300
            + R  +  IDN              E EYDP L+EL+  V                   
Sbjct: 247 GMARQVRL-IDN--------------EKEYDPTLNELRGPV------------------- 306

Query: 301 TENNGSAAGLSKGAFVEPVTDN------------------RCTGARRRKSGSVRRFRHDS 360
             NN + AG S+G  +    DN                  R  GA+RRKSGSV+RF+ D 
Sbjct: 307 --NNSNGAGCSQGGGIGSEGDNVRPNGLLKVYPKELDKNSRFIGAKRRKSGSVKRFKQDG 366

Query: 361 TLS---ALPRSQNAELTLAVVESGARVEPIGVENSG-YHGESLSRNNKTDDARNEMSITK 420
           + S     P  QN    L  ++S  R+  +G E  G     +LS+  K +    E+ ITK
Sbjct: 367 STSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIE----ELDITK 426

Query: 421 IIKPLGYSASVSNNMQDVLVTFVAMRSDGTEVVVDNKFLKAINPLLLINFYEQHLRY 451
           I+KP+ ++ASVS+N+Q+VLVTF+A+RSDG E +VDN+FLKA NP LLI FYEQHL+Y
Sbjct: 427 ILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKY 441

The following BLAST results are available for this feature:

BLAST of CsGy6G006030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q946J8	3.3e-67	42.93	Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana OX=3702 GN=LHP1 PE...	[more]
Q944N1	7.5e-56	38.24	Chromo domain protein LHP1 OS=Solanum lycopersicum OX=4081 GN=LHP1 PE=1 SV=2	[more]
Q339W7	2.9e-39	32.96	Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica O...	[more]
P29227	3.4e-08	43.48	Heterochromatin protein 1 OS=Drosophila virilis OX=7244 GN=HP1A PE=3 SV=1	[more]
P05205	1.0e-07	34.65	Heterochromatin protein 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)205 PE=1 ...	[more]

BLAST of CsGy6G006030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145010.1	0.0	100.00	chromo domain-containing protein LHP1 isoform X1 [Cucumis sativus] >XP_031743413...	[more]
XP_008460094.1	8.56e-308	95.81	PREDICTED: chromo domain-containing protein LHP1-like [Cucumis melo]	[more]
XP_031743414.1	4.75e-293	93.39	chromo domain-containing protein LHP1 isoform X2 [Cucumis sativus]	[more]
TYK24517.1	1.37e-282	96.18	chromo domain-containing protein LHP1-like [Cucumis melo var. makuwa]	[more]
XP_038874378.1	1.04e-280	89.65	chromo domain-containing protein LHP1 [Benincasa hispida] >XP_038874379.1 chromo...	[more]

BLAST of CsGy6G006030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBN0	0.0	100.00	Chromo domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G078540 PE=4...	[more]
A0A1S3CBU8	4.15e-308	95.81	chromo domain-containing protein LHP1-like OS=Cucumis melo OX=3656 GN=LOC1034990...	[more]
A0A5D3DLL0	6.61e-283	96.18	Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7TEU9	1.91e-278	93.27	Chromo domain-containing protein LHP1-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1KVS2	8.81e-246	80.62	chromo domain-containing protein LHP1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CsGy6G006030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17690.1	2.3e-68	42.93	like heterochromatin protein (LHP1)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017984	Chromo domain subgroup	PRINTS	PR00504	CHROMODOMAIN	coord: 129..141 score: 51.03 coord: 101..109 score: 28.52 coord: 114..128 score: 41.33
IPR008251	Chromo shadow domain	SMART	SM00300	ChS_2	coord: 380..453 e-value: 3.3E-6 score: 36.6
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 103..156 e-value: 7.2E-16 score: 68.7
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 104..163 score: 17.951302
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 104..153 e-value: 1.8E-15 score: 56.6
None	No IPR available	GENE3D	2.40.50.40		coord: 75..154 e-value: 3.4E-22 score: 79.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..184
None	No IPR available	PANTHER	PTHR47240:SF2	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 8..453
None	No IPR available	CDD	cd00024	CD_CSD	coord: 104..153 e-value: 5.65517E-22 score: 86.762
IPR044251	Chromo domain-containing protein LHP1	PANTHER	PTHR47240	CHROMO DOMAIN-CONTAINING PROTEIN LHP1	coord: 8..453
IPR023779	Chromo domain, conserved site	PROSITE	PS00598	CHROMO_1	coord: 121..141
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 99..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G006030.2	CsGy6G006030.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
biological_process	GO:0006325	chromatin organization
cellular_component	GO:0000792	heterochromatin
cellular_component	GO:0005634	nucleus