Cp4.1LG03g09830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCGTACAGTTGCATCCCAACCGCTGTTCCCGCGCTTTCACAGAACAGGCATTGAAAACCTGCGCTAAGATTAGCTCATCAATCGGCGTTTTCCATTCGGATTTCTACGCCTTCCTTTCCGTAGTTCCGTCATAATCGATTCTTCTCCTAACTAACCAGGTTTTGATTGACTGGTCTCCGGCTTCCATTTCCCCCATCATTTTCCTTTTCCGGCCACCGTCGATCAAAACCTGCCCATTTCCGCCCTTTCTCGTACGTCTCCTTCCTCAATCTTACGCTCAACCAGGTTTCACTCTTGTTCTCTTTAATCTCCCTTTTATTTGGAAATCACGCTTTGATTTAAGCTGTGATTGTGATTTTTGTTTGAATCGCAGGCGTAGGAATATTCATTATTTAGGTTGGAGTTTTTTCTTTTTCTTTTTCCTCTCGAGATCGGGTAGTTAAGGGTTTCAGTTTATAGCTAATCGGAAGACGAAAGAAAAATGGGTACCTCTGTTAAGGGCCTCATGAAAGGAATTAAATACATTTCACAGATTTTCGGTATGTTTTCTTTTTCTTCTTTTCGTTTTCCCCCAATTTGCTCTGGGTTGTAAAATATATTGAATGATCGGTTTGAGCGAGATTCTTGCAGATGAAAAAGAACAGGAAATGCAGATTGGGCTTCCCACTGACGTTAAGCATGTCGCTCACATTGGATGGGATGGTCCATCTGCTAATCAGAATAATACACCTACCTGGGTATGAATAATCATCTTTTGTTTTCAAGTTTTCTGAACATCGATTTGAATTGTATGTGTGATGCAAAATTGAACAGATGAACGAGTTCAAATCTTCGTCACAATCCCAAAACTCAGACGATTTGGCTAGTTCTACTGGGGAACTTGATCTTTCTTCTGTTCGAGGTATGCTTCATCATCTTCTTCTAATCTATATTCTGGGGTGACTGAGATGGCAAACCATTATAATCTCACCATGTAGGTAGAGAAAATTGAACCGATCATGAATTTATAACTAAGAAATATTATCTCTGTCGGTACAAATTTTTTTAGAAAATTAGAAACAAAGCTAATGAGAGCTCAAAGTAGATAATATCCTATCCTTGCGGAGGGTTTGAGGGTGACTGAGATTTGGTTTAGAATGGTAGCGGTTTTTTTGTATGTTTGAAATCTTCCTGAGGATGTAGAATTGAAGTTGGTAATAGGAGTGATATTTGTGTATAGAATCTGGAGAGCTAGATGTGAAAAAGGAAGGTCGAGCTCCAAGGTCAAAACGCCAAACTTCAACAGACTCTTCCTCATCCTTAGACTCTTCTTCTGCTCGGCGGAACTCGGAGAAGAGCTCCAGGCGACAGCGATCATCATGCCCCTCGGGTGACTCGGGACCCCAGGAAGGTAGTTCGCGACATTCACGACGTCGTCGTGGTTCAGCTCCTGGAAATGAAACTAGCACAGAAAATCCTGTACCTAAACATTCTCATCGGAGGAAATCTAAGGGGTCATCGGACGGTGGTGAATCTTCAAAATCAAGAAACAACGACTCTTTAACAGACATAACTCTACCAGTTGTGGACGAAGAGAAGGGATGAGCAGAATTCCAGACAAGGTACTACTAAACGGCATTTCAAATGGTTCCTTGCCCCAATAAGGACCAAATTTTGTTACCTTGGAGATGATATGATTTTAGCTTCAGTAATCGGTTATTGGTTTACTACCAAGCAGAAGGGTGTTGTTCTGTAACATGAGCGAACAGCCATTTCTTGAAAATAATGTCCCACGTGTAATCTGAAATTTGGATTTCTACATTGTTCAGCACCCCTTTTCAATGCAGTGGGGATTAGTATGATCATCATAAACCACTGTTATCGACAAAGCTTTGTAGTCACAATAACAGCACTTAGATAGAGCTTATTGTTCCTTTGTCAAATTTGTTGCACTTTTATGCACCATATGAAACATTTCATCTCTCAGGTAATACAATTCTCTTTCCGTCTAATATACTCTCTCTCTCTCTCTCAATTCTCCCTTAAACTAGAGACTTCTTGCTTTCTCTTCCTATCTATGGCTACAGCAGTTGATCTCCGAGTATAACCTGGTGTCCAA GCCGTACAGTTGCATCCCAACCGCTGTTCCCGCGCTTTCACAGAACAGGCATTGAAAACCTGCGCTAAGATTAGCTCATCAATCGGCGTTTTCCATTCGGATTTCTACGCCTTCCTTTCCGTAGTTCCGTCATAATCGATTCTTCTCCTAACTAACCAGGTTTTGATTGACTGGTCTCCGGCTTCCATTTCCCCCATCATTTTCCTTTTCCGGCCACCGTCGATCAAAACCTGCCCATTTCCGCCCTTTCTCGTACGTCTCCTTCCTCAATCTTACGCTCAACCAGGCGTAGGAATATTCATTATTTAGGTTGGAGTTTTTTCTTTTTCTTTTTCCTCTCGAGATCGGGTAGTTAAGGGTTTCAGTTTATAGCTAATCGGAAGACGAAAGAAAAATGGGTACCTCTGTTAAGGGCCTCATGAAAGGAATTAAATACATTTCACAGATTTTCGATGAAAAAGAACAGGAAATGCAGATTGGGCTTCCCACTGACGTTAAGCATGTCGCTCACATTGGATGGGATGGTCCATCTGCTAATCAGAATAATACACCTACCTGGATGAACGAGTTCAAATCTTCGTCACAATCCCAAAACTCAGACGATTTGGCTAGTTCTACTGGGGAACTTGATCTTTCTTCTGTTCGAGAATCTGGAGAGCTAGATGTGAAAAAGGAAGGTCGAGCTCCAAGGTCAAAACGCCAAACTTCAACAGACTCTTCCTCATCCTTAGACTCTTCTTCTGCTCGGCGGAACTCGGAGAAGAGCTCCAGGCGACAGCGATCATCATGCCCCTCGGGTGACTCGGGACCCCAGGAAGGTAGTTCGCGACATTCACGACGTCGTCGTGGTTCAGCTCCTGGAAATGAAACTAGCACAGAAAATCCTGTACCTAAACATTCTCATCGGAGGAAATCTAAGGGGTCATCGGACGGTGGTGAATCTTCAAAATCAAGAAACAACGACTCTTTAACAGACATAACTCTACCAGTTGTGGACGAAGAGAAGGGATGAGCAGAATTCCAGACAAGGTACTACTAAACGGCATTTCAAATGGTTCCTTGCCCCAATAAGGACCAAATTTTGTTACCTTGGAGATGATATGATTTTAGCTTCAGTAATCGGTTATTGGTTTACTACCAAGCAGAAGGGTGTTGTTCTGTAACATGAGCGAACAGCCATTTCTTGAAAATAATGTCCCACGTGTAATCTGAAATTTGGATTTCTACATTGTTCAGCACCCCTTTTCAATGCAGTGGGGATTAGTATGATCATCATAAACCACTGTTATCGACAAAGCTTTGTAGTCACAATAACAGCACTTAGATAGAGCTTATTGTTCCTTTGTCAAATTTGTTGCACTTTTATGCACCATATGAAACATTTCATCTCTCAGGTAATACAATTCTCTTTCCGTCTAATATACTCTCTCTCTCTCTCTCAATTCTCCCTTAAACTAGAGACTTCTTGCTTTCTCTTCCTATCTATGGCTACAGCAGTTGATCTCCGAGTATAACCTGGTGTCCAA ATGGGTACCTCTGTTAAGGGCCTCATGAAAGGAATTAAATACATTTCACAGATTTTCGATGAAAAAGAACAGGAAATGCAGATTGGGCTTCCCACTGACGTTAAGCATGTCGCTCACATTGGATGGGATGGTCCATCTGCTAATCAGAATAATACACCTACCTGGATGAACGAGTTCAAATCTTCGTCACAATCCCAAAACTCAGACGATTTGGCTAGTTCTACTGGGGAACTTGATCTTTCTTCTGTTCGAGAATCTGGAGAGCTAGATGTGAAAAAGGAAGGTCGAGCTCCAAGGTCAAAACGCCAAACTTCAACAGACTCTTCCTCATCCTTAGACTCTTCTTCTGCTCGGCGGAACTCGGAGAAGAGCTCCAGGCGACAGCGATCATCATGCCCCTCGGGTGACTCGGGACCCCAGGAAGGTAGTTCGCGACATTCACGACGTCGTCGTGGTTCAGCTCCTGGAAATGAAACTAGCACAGAAAATCCTGTACCTAAACATTCTCATCGGAGGAAATCTAAGGGGTCATCGGACGGTGGTGAATCTTCAAAATCAAGAAACAACGACTCTTTAACAGACATAACTCTACCAGTTGTGGACGAAGAGAAGGGATGA MGTSVKGLMKGIKYISQIFDEKEQEMQIGLPTDVKHVAHIGWDGPSANQNNTPTWMNEFKSSSQSQNSDDLASSTGELDLSSVRESGELDVKKEGRAPRSKRQTSTDSSSSLDSSSARRNSEKSSRRQRSSCPSGDSGPQEGSSRHSRRRRGSAPGNETSTENPVPKHSHRRKSKGSSDGGESSKSRNNDSLTDITLPVVDEEKG Homology
BLAST of Cp4.1LG03g09830 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-18 Identity = 80/213 (37.56%), Postives = 110/213 (51.64%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.7e-18 Identity = 77/211 (36.49%), Postives = 115/211 (54.50%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy Swiss-Prot
Match: F4J424 (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.1e-17 Identity = 79/205 (38.54%), Postives = 114/205 (55.61%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 5.5e-14 Identity = 65/197 (32.99%), Postives = 103/197 (52.28%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy Swiss-Prot
Match: F4I5N6 (CRIB domain-containing protein RIC3 OS=Arabidopsis thaliana OX=3702 GN=RIC3 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.3e-11 Identity = 75/215 (34.88%), Postives = 107/215 (49.77%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. NCBI nr
Match: XP_023528703.1 (CRIB domain-containing protein RIC1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375 bits (963), Expect = 1.54e-130 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. NCBI nr
Match: XP_022924780.1 (CRIB domain-containing protein RIC7-like [Cucurbita moschata] >XP_022924781.1 CRIB domain-containing protein RIC7-like [Cucurbita moschata]) HSP 1 Score: 365 bits (936), Expect = 2.01e-126 Identity = 200/205 (97.56%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. NCBI nr
Match: KAG6582396.1 (CRIB domain-containing protein RIC1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018800.1 CRIB domain-containing protein RIC1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 362 bits (930), Expect = 1.65e-125 Identity = 198/205 (96.59%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. NCBI nr
Match: XP_022979372.1 (CRIB domain-containing protein RIC7-like [Cucurbita maxima] >XP_022979373.1 CRIB domain-containing protein RIC7-like [Cucurbita maxima]) HSP 1 Score: 352 bits (903), Expect = 2.95e-121 Identity = 199/214 (92.99%), Postives = 202/214 (94.39%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. NCBI nr
Match: XP_004134407.1 (CRIB domain-containing protein RIC5 [Cucumis sativus] >KGN56841.1 hypothetical protein Csa_010887 [Cucumis sativus]) HSP 1 Score: 289 bits (740), Expect = 1.71e-96 Identity = 169/215 (78.60%), Postives = 185/215 (86.05%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy TrEMBL
Match: A0A6J1EG09 (CRIB domain-containing protein RIC7-like OS=Cucurbita moschata OX=3662 GN=LOC111432175 PE=4 SV=1) HSP 1 Score: 365 bits (936), Expect = 9.73e-127 Identity = 200/205 (97.56%), Postives = 201/205 (98.05%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy TrEMBL
Match: A0A6J1INK5 (CRIB domain-containing protein RIC7-like OS=Cucurbita maxima OX=3661 GN=LOC111479116 PE=4 SV=1) HSP 1 Score: 352 bits (903), Expect = 1.43e-121 Identity = 199/214 (92.99%), Postives = 202/214 (94.39%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy TrEMBL
Match: A0A0A0L9S1 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134890 PE=4 SV=1) HSP 1 Score: 289 bits (740), Expect = 8.30e-97 Identity = 169/215 (78.60%), Postives = 185/215 (86.05%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy TrEMBL
Match: A0A5D3CZJ5 (CRIB domain-containing protein RIC7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001780 PE=4 SV=1) HSP 1 Score: 286 bits (733), Expect = 1.23e-95 Identity = 169/217 (77.88%), Postives = 185/217 (85.25%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. ExPASy TrEMBL
Match: A0A1S3AWI0 (CRIB domain-containing protein RIC7-like OS=Cucumis melo OX=3656 GN=LOC103483575 PE=4 SV=1) HSP 1 Score: 284 bits (727), Expect = 1.00e-94 Identity = 168/217 (77.42%), Postives = 184/217 (84.79%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 ) HSP 1 Score: 93.6 bits (231), Expect = 2.0e-19 Identity = 80/213 (37.56%), Postives = 110/213 (51.64%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19 Identity = 77/211 (36.49%), Postives = 115/211 (54.50%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. TAIR 10
Match: AT3G23380.1 (ROP-interactive CRIB motif-containing protein 5 ) HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18 Identity = 79/205 (38.54%), Postives = 114/205 (55.61%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 ) HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15 Identity = 65/197 (32.99%), Postives = 103/197 (52.28%), Query Frame = 0
BLAST of Cp4.1LG03g09830 vs. TAIR 10
Match: AT1G04450.1 (ROP-interactive CRIB motif-containing protein 3 ) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12 Identity = 75/215 (34.88%), Postives = 107/215 (49.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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