CsGy3G017125 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G017125
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	60S ribosomal protein L36
Location	Gy14Chr3: 13151986 .. 13153087 (+)
RNA-Seq Expression	CsGy3G017125
Synteny	CsGy3G017125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTACCAAGAAAGAGTTGGCTCCCCGCCCCTCAGATCGTAAAGGAGTAAGTCGATTTTGTGTTTTGTTAATCTATAGTGACATTTGATAATCACAGAGGTTCTGAACTACTCCGTGTTTAAATTTTTATCGAGTGATTCTGTTCATCAATTCTCTTACGTGGGACTTTAGTGGTGGATGAAACGGGTTTGCCTGGTGCATGATGAAACTTGAGAGGGGCGATTTGAAACGACATTTTTAATAATTATCCTATGTGATATGAACTCAAATTAATACTCTACAGAAGCTCTAAAGCTAGCATGTAGAATGATTGAAAGTTTGTTTGCCTGGTTGGAACCTTATGATCAAGTGATTTTTAAAATCTGAAGTGATTTCAAATCCTATTTTTATTTAAAAATTTTCTTACCCTAAGGGTTAAAGTTTTACCGGATTTCATAGGATCTACAAGTAAATTAGAGAGTTAACCCGTAAATTCCTTACTTTTTTATCATTTTCAGTTACCATCTGAACTGAGATTTTAAATACATTCATTTCAACTATGATTTCAAATCACAGGATTTAAAAGTAATTTGAACTTCTTTTGTTCTGGATTATTGGTTTCTTTTGGAGATATTAGCTATTGGTGGATAGAATTAATTGTCACTAATGATTAATGTTTGCTTTAATTTTGATTGTTACCATAGAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGAGTTTGATTCGTGAAGTTGCTGGCTTTGCCCCGTACGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACAAGAGGGCACTTAAAGTGGCCAAGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGAAGAGATGTCCAGCGTACTCCGCAAGATGAGGTAATTTTTAGACGGCCTTGAATTTTCTTTCCTCATTATGTTTGAATTTATCCTGTCAGTGTTAATATACATTGTAATTACGTTTCAAGCTGTATACTAAAACCTTTTCCTTTGAATATATTTTTGATACAGAGCTGGTGGAGGTGCCGAGAAGAAGAAATGA

mRNA sequence

ATGGCTCCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTACCAAGAAAGAGTTGGCTCCCCGCCCCTCAGATCGTAAAGGAAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGAGTTTGATTCGTGAAGTTGCTGGCTTTGCCCCGTACGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACAAGAGGGCACTTAAAGTGGCCAAGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGAAGAGATGTCCAGCGTACTCCGCAAGATGAGAGCTGGTGGAGGTGCCGAGAAGAAGAAATGA

Coding sequence (CDS)

ATGGCTCCGAAGCAGCCGAATACTGGTCTCTTTGTGGGACTTAACAAAGGACACATAGTTACCAAGAAAGAGTTGGCTCCCCGCCCCTCAGATCGTAAAGGAAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGAGTTTGATTCGTGAAGTTGCTGGCTTTGCCCCGTACGAGAAGAGAATCACTGAGCTTCTTAAAGTTGGAAAGGACAAGAGGGCACTTAAAGTGGCCAAGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGAAGAGATGTCCAGCGTACTCCGCAAGATGAGAGCTGGTGGAGGTGCCGAGAAGAAGAAATGA

Protein sequence

MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK*

Homology

[Close]

BLAST of CsGy3G017125 vs. ExPASy Swiss-Prot
Match: Q9M352 (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-41
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]

BLAST of CsGy3G017125 vs. ExPASy Swiss-Prot
Match: O80929 (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-40
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---AEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG   AEKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

[Close]

BLAST of CsGy3G017125 vs. ExPASy Swiss-Prot
Match: Q9LZ57 (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.1e-40
Identity = 86/104 (82.69%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVG
Sbjct: 4   TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGG-GAEKKK 111
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG GA +KK
Sbjct: 64  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKK 107

[Close]

BLAST of CsGy3G017125 vs. ExPASy Swiss-Prot
Match: P52866 (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-33
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
          MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVR+LIREVAGF PYEKRI
Sbjct: 1  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60

Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 92
          TELLKVGKDKRALKV + K+G H +  K+ E
Sbjct: 61 TELLKVGKDKRALKVRQEKVG-HSQESKEEE 90

[Close]

BLAST of CsGy3G017125 vs. ExPASy Swiss-Prot
Match: Q9LRB8 (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28
Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 12  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKR 71
           VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKR
Sbjct: 6   VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKR 65

Query: 72  ALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAE 108
           ALK+ KRKLGTH R KKKREEM+ VLRKM+A    E
Sbjct: 66  ALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101

[Close]

BLAST of CsGy3G017125 vs. NCBI nr
Match: XP_004140771.1 (60S ribosomal protein L36-2 [Cucumis sativus] >XP_004152381.1 60S ribosomal protein L36-2 [Cucumis sativus] >XP_008436991.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >XP_008439254.1 PREDICTED: 60S ribosomal protein L36-2-like [Cucumis melo] >ADN34294.1 60S ribosomal protein l36e [Cucumis melo subsp. melo] >KAA0033670.1 60S ribosomal protein L36-2-like isoform X2 [Cucumis melo var. makuwa] >KAA0055075.1 60S ribosomal protein L36-2-like isoform X2 [Cucumis melo var. makuwa] >KGN50297.1 hypothetical protein Csa_000263 [Cucumis sativus] >KGN57388.1 hypothetical protein Csa_009903 [Cucumis sativus])

HSP 1 Score: 203 bits (516), Expect = 1.87e-65
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]

BLAST of CsGy3G017125 vs. NCBI nr
Match: XP_022945858.1 (60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958050.1 60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022995694.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023532485.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023532486.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >XP_023541175.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >KAG6605730.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035637.1 60S ribosomal protein L36-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 7.64e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]

BLAST of CsGy3G017125 vs. NCBI nr
Match: KAG7013242.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 7.89e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]

BLAST of CsGy3G017125 vs. NCBI nr
Match: XP_022923053.1 (60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923055.1 60S ribosomal protein L36-2-like isoform X2 [Cucurbita moschata] >XP_022923056.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022985002.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985003.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_022985004.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023552431.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200 bits (509), Expect = 2.19e-64
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]

BLAST of CsGy3G017125 vs. NCBI nr
Match: KAG7014765.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200 bits (509), Expect = 2.26e-64
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRI
Sbjct: 2   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRNLIREVAGFAPYEKRI 61

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 62  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 111

[Close]

BLAST of CsGy3G017125 vs. ExPASy TrEMBL
Match: A0A0A0L6L0 (60S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]

BLAST of CsGy3G017125 vs. ExPASy TrEMBL
Match: A0A1S3AYD7 (60S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]

BLAST of CsGy3G017125 vs. ExPASy TrEMBL
Match: A0A5A7UN62 (60S ribosomal protein L36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00730 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]

BLAST of CsGy3G017125 vs. ExPASy TrEMBL
Match: E5GCU5 (60S ribosomal protein L36 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 9.08e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110

[Close]

BLAST of CsGy3G017125 vs. ExPASy TrEMBL
Match: A0A6J1H2C5 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 3.70e-65
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110
           TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGGEKKK 110

[Close]

BLAST of CsGy3G017125 vs. TAIR 10
Match: AT3G53740.2 (Ribosomal protein L36e family protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-43
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]

BLAST of CsGy3G017125 vs. TAIR 10
Match: AT3G53740.3 (Ribosomal protein L36e family protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-43
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]

BLAST of CsGy3G017125 vs. TAIR 10
Match: AT3G53740.4 (Ribosomal protein L36e family protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.1e-43
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60
           M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRI
Sbjct: 1   MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60

Query: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--AEKKK 111
           TELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GGG   EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112

[Close]

BLAST of CsGy3G017125 vs. TAIR 10
Match: AT2G37600.1 (Ribosomal protein L36e family protein )

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-41
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---AEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG   AEKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

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BLAST of CsGy3G017125 vs. TAIR 10
Match: AT2G37600.2 (Ribosomal protein L36e family protein )

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-41
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 8   TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVG 67
           TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVG
Sbjct: 8   TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67

Query: 68  KDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG---AEKK 110
           KDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG   AEKK
Sbjct: 68  KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112

The following BLAST results are available for this feature:

BLAST of CsGy3G017125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M352	1.3e-41	80.36	60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1	[more]
O80929	2.4e-40	83.81	60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1	[more]
Q9LZ57	9.1e-40	82.69	60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1	[more]
P52866	2.2e-33	82.42	60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2	[more]
Q9LRB8	2.8e-28	70.83	60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1	[more]

BLAST of CsGy3G017125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140771.1	1.87e-65	100.00	60S ribosomal protein L36-2 [Cucumis sativus] >XP_004152381.1 60S ribosomal prot...	[more]
XP_022945858.1	7.64e-65	99.09	60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022958049.1 60S riboso...	[more]
KAG7013242.1	7.89e-65	99.09	60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022923053.1	2.19e-64	98.18	60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata] >XP_022923054.1...	[more]
KAG7014765.1	2.26e-64	98.18	60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of CsGy3G017125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6L0	9.08e-66	100.00	60S ribosomal protein L36 OS=Cucumis sativus OX=3659 GN=Csa_3G182240 PE=3 SV=1	[more]
A0A1S3AYD7	9.08e-66	100.00	60S ribosomal protein L36 OS=Cucumis melo OX=3656 GN=LOC103484093 PE=3 SV=1	[more]
A0A5A7UN62	9.08e-66	100.00	60S ribosomal protein L36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
E5GCU5	9.08e-66	100.00	60S ribosomal protein L36 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A6J1H2C5	3.70e-65	99.09	60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=...	[more]

BLAST of CsGy3G017125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53740.2	9.1e-43	80.36	Ribosomal protein L36e family protein	[more]
AT3G53740.3	9.1e-43	80.36	Ribosomal protein L36e family protein	[more]
AT3G53740.4	9.1e-43	80.36	Ribosomal protein L36e family protein	[more]
AT2G37600.1	1.7e-41	83.81	Ribosomal protein L36e family protein	[more]
AT2G37600.2	1.7e-41	83.81	Ribosomal protein L36e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000509	Ribosomal protein L36e	PFAM	PF01158	Ribosomal_L36e	coord: 8..101 e-value: 8.5E-43 score: 144.5
IPR000509	Ribosomal protein L36e	PANTHER	PTHR10114	60S RIBOSOMAL PROTEIN L36	coord: 1..110
IPR000509	Ribosomal protein L36e	PROSITE	PS01190	RIBOSOMAL_L36E	coord: 55..65
IPR038097	Ribosomal protein L36e domain superfamily	GENE3D	1.10.10.1760	60S ribosomal protein L36	coord: 1..108 e-value: 1.8E-44 score: 152.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..110
None	No IPR available	PANTHER	PTHR10114:SF14	60S RIBOSOMAL PROTEIN L36-1-RELATED	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G017125.1	CsGy3G017125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome