CsGy3G023740 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G023740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	glutaredoxin-C1-like
Location	Gy14Chr3: 23662758 .. 23663888 (+)
RNA-Seq Expression	CsGy3G023740
Synteny	CsGy3G023740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATACCAAGCACAACAACAATACGGAGCTTCTGCTTCTTCTTCCTCCTCCTATTCTGCCAACGATCCGATGCGTCGGATAGAGCGTATGGCGGCCGAGAACGCGGTGGTCATGTTCAGCATGACTTCATGTTGCATGTGCCACGCTGTCAAACGTCTCTTTTGTGGAATGGGAGTTAAGACTACAGTGTACGAGCTAGACGAGGACCCGAGAGGAAAAGAGATAGAGAAGGCTTTGATGCGTTTAATGGGAAGCTCCTCAGCTGTTCCCGCCGTCTTCATCGGTGGGAAACTCATTGGCTCTATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTCGTCCCTCTCCTGAAAAGCGCCGGCGCGCTTTGGCTTTAAAACGTCTTCAGCGTATGTATCTTGACATATGTCGTTAATGTGCCTGTTTTCTTGACCCAGTTGAGATATGTTTGTGTTTTGCAGTAAAAGAAAAAAAATGTGAATTAAGAAAGTTGAAAAGAAGAGGAAGAGGAGAGTGTTGGGTACTTGTAATAATTAGCTCCCTCCTCTGAAAAAATAAAAAAAAAGAATAACAGTTTTTTTTCTTTCTTGTTTATTATGTGTTTTTGTTTATGAAAGTTTGAAAAATTGTTTGCCTTTTCTTTATCTCAAGAGACGGGTTTCTTTCATAACCCATTTAGCAAATTATTCTTCACTGCATCATATATATAAATGGATATGATTTGGATTCGAAAATGCATACAGAGAAAATAGTTGCATGGCAAAAGAAAAAAAAAGGAAATCAGGTTATTAAAATAATTTTTTAAAAAAGGAACATATTTTTAGTAAGGTAAGAATTTATCCATGAGAATGGATAACTACCAAGAAAAAAAAAAGGGAAAAAGGTGTTAAAGAATATAATTAAAACATTAATTTATGAAAACCCATAATAATTTAAGCATTTAAATTGTAAAGGAAAAAAAATGTATTTTAAAGCTTTTTTTTTTCTTTAATGTAATGGTAATTTAATAATAATAATAATAGAACAGACAGAATCTAAAACAAGCTAGAAGAGAGAGAGCTTTGTCGTCCTCCTTGTCTGCAGATTTGAGTCTCAAATTCAGCCACCGCCACCGTAGGAGATAG

mRNA sequence

ATGCAATACCAAGCACAACAACAATACGGAGCTTCTGCTTCTTCTTCCTCCTCCTATTCTGCCAACGATCCGATGCGTCGGATAGAGCGTATGGCGGCCGAGAACGCGGTGGTCATGTTCAGCATGACTTCATGTTGCATGTGCCACGCTGTCAAACGTCTCTTTTGTGGAATGGGAGTTAAGACTACAGTGTACGAGCTAGACGAGGACCCGAGAGGAAAAGAGATAGAGAAGGCTTTGATGCGTTTAATGGGAAGCTCCTCAGCTGTTCCCGCCGTCTTCATCGGTGGGAAACTCATTGGCTCTATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTCAATCTAAAACAAGCTAGAAGAGAGAGAGCTTTGTCGTCCTCCTTGTCTGCAGATTTGAGTCTCAAATTCAGCCACCGCCACCGTAGGAGATAG

Coding sequence (CDS)

ATGCAATACCAAGCACAACAACAATACGGAGCTTCTGCTTCTTCTTCCTCCTCCTATTCTGCCAACGATCCGATGCGTCGGATAGAGCGTATGGCGGCCGAGAACGCGGTGGTCATGTTCAGCATGACTTCATGTTGCATGTGCCACGCTGTCAAACGTCTCTTTTGTGGAATGGGAGTTAAGACTACAGTGTACGAGCTAGACGAGGACCCGAGAGGAAAAGAGATAGAGAAGGCTTTGATGCGTTTAATGGGAAGCTCCTCAGCTGTTCCCGCCGTCTTCATCGGTGGGAAACTCATTGGCTCTATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTCAATCTAAAACAAGCTAGAAGAGAGAGAGCTTTGTCGTCCTCCTTGTCTGCAGATTTGAGTCTCAAATTCAGCCACCGCCACCGTAGGAGATAG

Protein sequence

MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSLNLKQARRERALSSSLSADLSLKFSHRHRRR*

Homology

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BLAST of CsGy3G023740 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 7.1e-32
Identity = 71/122 (58.20%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 8   QYGASASSSSSY----------SANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCG 67
           QYGA+A+  + Y          +A     R+ER+A+E+AVV+FS++SCCMCHAVKRLFCG
Sbjct: 2   QYGAAAAEQAWYMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCG 61

Query: 68  MGVKTTVYELDEDPRGKEIEKALMRLMG----SSSAVPAVFIGGKLIGSMDRVMASHING 116
           MGV   V+ELD DPRG+++E+AL RL+G    +++AVP VFIGGKL+G+MDRVMA+HING
Sbjct: 62  MGVHPAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHING 121

[Close]

BLAST of CsGy3G023740 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-31
Identity = 73/122 (59.84%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 8   QYGASASSSSSYSANDP-------MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 67
           QYGA+A  +    A  P       + R+ER+A+E+AVV+FS++SCCMCHAVKRLFCGMGV
Sbjct: 2   QYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGV 61

Query: 68  KTTVYELDEDPRGKEIEKALMRLMG-------SSSAVPAVFIGGKLIGSMDRVMASHING 116
             TV+ELD DPRG+E+E+AL RL+G       S   VP VFIGGKL+G+MDRVMA+HING
Sbjct: 62  HPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHING 121

[Close]

BLAST of CsGy3G023740 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-30
Identity = 62/91 (68.13%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M R+ R+AA+ AVV+FSM+SCCMCH V RLFC +GV  TV ELDEDPRGKE+EKAL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSL 116
           G S AVPAVFIGG+L+GS D+VM+ H++G+L
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNL 91

[Close]

BLAST of CsGy3G023740 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-27
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSAN------DPMRRIERMAAENAVVMFSMTSCCMCHAVKRL 60
           MQY+ + +   S +++S    N      + + +IE MAAENAVV+FS+++CCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 61  FCGMGVKTTVYELDEDPRGKEIEKALMRLMGSSS-------AVPAVFIGGKLIGSMDRVM 116
           F GMGV   V+ELD  P G EI +AL+RL+G SS       A+P VFIGGK++G+M+RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

[Close]

BLAST of CsGy3G023740 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 7.6e-26
Identity = 67/125 (53.60%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYS-----ANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLF 60
           MQYQ  + +G+   SS  +      A+  + RIE +A+E+AVV+FS+++CCMCHAVK LF
Sbjct: 1   MQYQT-ESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVKTTVYELDEDPRGKEIEKALMRLMG-----SSSAVPAVFIGGKLIGSMDRVMASH 116
            GMGV   V+ELD  P G +I++AL+RL+G     S  ++P VFIGGKL+G+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

[Close]

BLAST of CsGy3G023740 vs. NCBI nr
Match: KAE8650767.1 (hypothetical protein Csa_017594 [Cucumis sativus])

HSP 1 Score: 233 bits (593), Expect = 2.01e-76
Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM
Sbjct: 1   MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSLNLKQARRERALSSSLSADLSLKFSHRHRR 144
           GSSSAVPAVFIGGKLIGSMDRVMASHINGSLNLK+ARRERALSSSLSADLSLKFSHRHRR
Sbjct: 61  GSSSAVPAVFIGGKLIGSMDRVMASHINGSLNLKEARRERALSSSLSADLSLKFSHRHRR 120

[Close]

BLAST of CsGy3G023740 vs. NCBI nr
Match: XP_004148005.1 (glutaredoxin-C1 [Cucumis sativus])

HSP 1 Score: 221 bits (564), Expect = 6.46e-72
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115

[Close]

BLAST of CsGy3G023740 vs. NCBI nr
Match: XP_008450140.1 (PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0060281.1 glutaredoxin-C1-like [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 2.63e-71
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYS NDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115

[Close]

BLAST of CsGy3G023740 vs. NCBI nr
Match: XP_038874416.1 (glutaredoxin-C1-like [Benincasa hispida])

HSP 1 Score: 204 bits (519), Expect = 4.50e-65
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYG+S SSSSSYSAND +RRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGSS-SSSSSYSANDSLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115
             TVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKL+GSMDRVM SHINGSL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLVGSMDRVMVSHINGSL 114

[Close]

BLAST of CsGy3G023740 vs. NCBI nr
Match: XP_022935242.1 (glutaredoxin-C1-like [Cucurbita moschata])

HSP 1 Score: 190 bits (482), Expect = 1.77e-59
Identity = 103/117 (88.03%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSL 115
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSL 111

[Close]

BLAST of CsGy3G023740 vs. ExPASy TrEMBL
Match: A0A0A0LB28 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G563270 PE=3 SV=1)

HSP 1 Score: 221 bits (564), Expect = 3.13e-72
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115

[Close]

BLAST of CsGy3G023740 vs. ExPASy TrEMBL
Match: A0A5A7V3D7 (Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00530 PE=3 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.27e-71
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYS NDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115

[Close]

BLAST of CsGy3G023740 vs. ExPASy TrEMBL
Match: A0A1S3BP86 (glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103491814 PE=3 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.27e-71
Identity = 114/115 (99.13%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGASASSSSSYS NDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSVNDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115
           KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSAVPAVFIGGKLIGSMDRVMASHINGSL 115

[Close]

BLAST of CsGy3G023740 vs. ExPASy TrEMBL
Match: A0A6J1F512 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1)

HSP 1 Score: 190 bits (482), Expect = 8.57e-60
Identity = 103/117 (88.03%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIERMAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS--AVPAVFIGGKLIGSMDRVMASHINGSL 115
             TVYELDEDPRGKEIEKALMRLMGSSS  AVPAVFIGGKL+GSMDRVMASHINGSL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSL 111

[Close]

BLAST of CsGy3G023740 vs. ExPASy TrEMBL
Match: A0A6J1J7B3 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1)

HSP 1 Score: 189 bits (479), Expect = 2.38e-59
Identity = 102/116 (87.93%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60
           MQYQAQQQYGAS+SSSS      PMRRIE+MAAENAVVMFS++SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASSSSSS------PMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGMGV 60

Query: 61  KTTVYELDEDPRGKEIEKALMRLMGSSSA-VPAVFIGGKLIGSMDRVMASHINGSL 115
             TVYELDEDPRGKEIEKALMRLMGSSSA VPAVFIGGKL+GSMDRVMASHINGSL
Sbjct: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSL 110

[Close]

BLAST of CsGy3G023740 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-28
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYSAN------DPMRRIERMAAENAVVMFSMTSCCMCHAVKRL 60
           MQY+ + +   S +++S    N      + + +IE MAAENAVV+FS+++CCMCHA+KRL
Sbjct: 1   MQYKTETRGSLSYNNNSKVMNNMNVFPSETLAKIESMAAENAVVIFSVSTCCMCHAIKRL 60

Query: 61  FCGMGVKTTVYELDEDPRGKEIEKALMRLMGSSS-------AVPAVFIGGKLIGSMDRVM 116
           F GMGV   V+ELD  P G EI +AL+RL+G SS       A+P VFIGGK++G+M+RVM
Sbjct: 61  FRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVM 120

[Close]

BLAST of CsGy3G023740 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 5.4e-27
Identity = 67/125 (53.60%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 1   MQYQAQQQYGASASSSSSYS-----ANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLF 60
           MQYQ  + +G+   SS  +      A+  + RIE +A+E+AVV+FS+++CCMCHAVK LF
Sbjct: 1   MQYQT-ESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVKTTVYELDEDPRGKEIEKALMRLMG-----SSSAVPAVFIGGKLIGSMDRVMASH 116
            GMGV   V+ELD  P G +I++AL+RL+G     S  ++P VFIGGKL+G+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

[Close]

BLAST of CsGy3G023740 vs. TAIR 10
Match: AT2G30540.1 (Thioredoxin superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 52/91 (57.14%), Postives = 72/91 (79.12%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M ++ RM++E  VV+FS +SCCM +AV+ LF  +GV  TV+E+D+DP  +EIEKALMRL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSL 116
           G S+ VPA+F+GGKLIGS + VM+ H++GSL
Sbjct: 61  GCSTPVPAIFVGGKLIGSTNEVMSLHLSGSL 90

[Close]

BLAST of CsGy3G023740 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 44/91 (48.35%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M R+  +A+E A V+F+ +SCCMCH++K LF  +G    ++ELD+DP+G ++E+AL R+ 
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSL 116
           GS+ AVPAVF+GG+ +GS   V++ H++GSL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSL 91

[Close]

BLAST of CsGy3G023740 vs. TAIR 10
Match: AT2G47880.1 (Glutaredoxin family protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-22
Identity = 49/91 (53.85%), Postives = 73/91 (80.22%), Query Frame = 0


Query: 25  MRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVKTTVYELDEDPRGKEIEKALMRLM 84
           M ++ RM++E  VV+F+ +SCC+C+AV+ LF  + V+ T++E+D DP  +EIEKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 85  GSSSAVPAVFIGGKLIGSMDRVMASHINGSL 116
           G S+AVPAVF+GGKL+GS + VM+ H++GSL
Sbjct: 61  GCSTAVPAVFVGGKLVGSTNEVMSLHLSGSL 90

The following BLAST results are available for this feature:

BLAST of CsGy3G023740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JDM4	7.1e-32	58.20	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q6K609	2.1e-31	59.84	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q7G8Y5	3.0e-30	68.13	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]
Q8LF89	4.0e-27	53.13	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q96305	7.6e-26	53.60	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]

BLAST of CsGy3G023740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650767.1	2.01e-76	99.17	hypothetical protein Csa_017594 [Cucumis sativus]	[more]
XP_004148005.1	6.46e-72	100.00	glutaredoxin-C1 [Cucumis sativus]	[more]
XP_008450140.1	2.63e-71	99.13	PREDICTED: glutaredoxin-C1-like [Cucumis melo] >KAA0060281.1 glutaredoxin-C1-lik...	[more]
XP_038874416.1	4.50e-65	93.04	glutaredoxin-C1-like [Benincasa hispida]	[more]
XP_022935242.1	1.77e-59	88.03	glutaredoxin-C1-like [Cucurbita moschata]	[more]

BLAST of CsGy3G023740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB28	3.13e-72	100.00	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G56327...	[more]
A0A5A7V3D7	1.27e-71	99.13	Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G...	[more]
A0A1S3BP86	1.27e-71	99.13	glutaredoxin-C1-like OS=Cucumis melo OX=3656 GN=LOC103491814 PE=3 SV=1	[more]
A0A6J1F512	8.57e-60	88.03	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1	[more]
A0A6J1J7B3	2.38e-59	87.93	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1	[more]

BLAST of CsGy3G023740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14070.1	2.9e-28	53.13	Thioredoxin superfamily protein	[more]
AT3G02000.1	5.4e-27	53.60	Thioredoxin superfamily protein	[more]
AT2G30540.1	1.0e-22	57.14	Thioredoxin superfamily protein	[more]
AT2G47870.1	1.0e-22	48.35	Thioredoxin superfamily protein	[more]
AT2G47880.1	3.1e-22	53.85	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 37..100 e-value: 1.5E-14 score: 53.9
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 22..142 e-value: 2.3E-27 score: 97.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 5..115
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 25..128 score: 19.456301
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 36..115 e-value: 1.44393E-36 score: 118.796
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 28..116 e-value: 8.0E-37 score: 123.2
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..115
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 25..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G023740.2	CsGy3G023740.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097573	glutathione oxidoreductase activity