Cp4.1LG03g00590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTAATACCTTCAAAAGAAATCCAATATTTTATTGAAGGAAATCCCAATCCAATCCCCCCAACATGACACTACACATGAAAGAACAGAAGGAGCGAATGGTCATTTTGAATTGGACTATAAAGCGAATAATAAATTCCGGCTAAAATACAAATAAAGAGAAGAAATTTAATTGGGAGGAAAACCAACAACAATATTAATAATAATTATATCAATATTGAAAAAGCAGACTCTTCTTCTACTCCCACATCGTTAAACAAAAAAAAAAAAAGAAAAAAAAAAAACTCTTTCCTCCTTTTGGTCAAAATAGTCTCACAATTTTAAAGAAAATATTAGGTGGATGGTGGACCAACCTGCTGATTCTCTGTGATCAACGGCTACGATCCTTCCTCCTGAAGGGCCATTTGTAAGCCAATGGAAGAATTTGGTACACTCTTCTTACGGTGTACTCGACTTCACACGAATAATTCCCCCCTCCCCCCACCATTCCCTCTCCTTCCCTTCCACCTACTCTGTTACTTATTCACACGCACCGCACACAACGAGAAGACCAAAATAAGCTAATTCGGCTCGGATTCTTTTATGGGTCGAGCTATCGGACCAGCATGTGACCGGAATCCCGCCGTCACGGCATCGTTGGCGCAGCAGTGAAATCCAACTGCCACCCCGGTCTCTCTCGCACTCAGGCAGTCACGGCAGGCCGTCGTCTTCGATTTCGCAGTACCGTTCCAGCCACCGTCTCCGTCTCCGCCCACCGTCAGATTCCTTAGCCCTACCCTCGTTGAGTAGTTCTCCCTCTCCAATTGCAGCTTCCGAATTCGCTCTTCGTAATCGTATCGGTCCATCGCCGGCGAGATGAAGCCGGAGAGCATTTCGTTTTCAATGCCAGCGTTTCGTCTCAACAACATCACATTCTCCGGTGGATTCTTCTTATTCGGTTGATTCGTCTTTGCCCTCGTCTTCGTCGCTGACGGGAGGTAGTATTCGTCTTCGTTGTTGTCGGTAACCTTCCGCCTCCTCTCGCGTCTCGACCGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGACATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATTCCGATCATCTTGCTCAAATCCGACTGAAAATTCTTGAAATCCGTCAAAGAAGAAACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACGATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAGTGAATGAATTCTTGTTCAATTGCGGAACAGAAGAAAAAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGGTTTTTATGGTAAGAAGGAGAAGGCGGTGAGGGTATTTTAGGAATAAAATATCAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGGATTTGTCTCTTTAATCCTTCTGGAAAAGTAATTTCTCTTATCCTTCCTCGCCTTCTTCTTTCTCTCCCATCTTGTTTTCTTCTGTTGATGATAATTGTTTTCTGTCCATTTAATCTTTTGCAGATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGTAATTTCTATTCCGACGTATTTCCAACTTTATTCATTGGGAAACAGGAAAGCACCGTCTCGCTGCTTTATTCCGTGCGAATTAGGGCATATAATTTATAGGTTCCATCTCTGATTTCTTTGTGGGAATATCCGGAAATCCTTTTGAAGGGCTCCTCAGATTTTCTTACACGCGAGTGAGAAATTCGAGGATCCTCTCAAATGAGAAGGGGATTTGTGCAAAATTGAATCCATCTCTCTCGAATCTTCTCTTTGAACATATTCTTAGTGAAATTCTTGCAATGGCTAGAACATTTCAAGTGAAAATTCTTTCTATGCTGCCATGGTTTCTTTCCATTAGGGAACTGTATTACCTTTCAGAAATCTGTTTATGGTATTGATGGGAACATTGACAATTTTGTGTGTTTCTTATCTTTTCAATCATGAGACTGAGAGGTGTTAGAAATGATGTATTTCATCTACATCTGCATTGTATTGTATCCCTAAATGATATAGCCTTTATTACTGCCTCGCGGGGCTTGAAGGTAGTGGAGGATCCTTAGATTTGTTTTCCTTGAAAATGATTTGCCATCATACAGGGTGGTGTAAATGAAGGCGAAGATCTCACTACGGCAGCCAAGAGAGAACTCGCTGAAGAAACTGGGGTAGTTTCTGCAGAAATTATTGCAGAGGTATGCATTTGGAGATGCCTCCAGCTTCTATATCTCGTTTTTCTATAGAAAAATGAAATCCAGCTTCGTTGAAATCGGGACTGATTCGTTCTATGGTTAAATATATAGCTACCCTACTGGCTTAGTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTCCTTTTGATGTTAAGGAACCTCCTTTTTAAAACGTGTCTGGACAGAGTCGTGCATTCTTGGTATAATCTTCTTGTTTATCATTAAAGAACCTATTGCGTGCGTATTTGGTAACTGTTTTTCTTTTTTTTCTTCCTCGAAAACTTGATCAATGTTTAAGGATTATGTGTTATCCCCTTCAAGCTTCCATGTTGGTTTGATCGATCCTGAAGCTCGTGACAGGTTTCTAATGAAGTTCACCGGAAAAGAAGAAGAGATTAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTTATGGATGTCAATTGAACAGATTATGAACCAAGTGAGTAAATTTCTTGTTGCTTCATTCTTTGTCCTGCAATTTCTCTTACTTTCTTATAATCGTTTGAACAGACTGCCGATGTCCGGAAGCCTGTTTATGCACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGAGTGTGATGATGTTTCTTTCAAGCAGAGTGAAACCCAATTAGTTAGCTGAAGTGTTCAAATTCTGCTATGGGAAGAAGAAAATTTATATTCATTATTCATACCACAATCATTATACGTGTACCGTATGAATCACAGGTTCGTATAAAATGTTGTATTCTTGTATCTAACTCTTGTTGTTCAAACAAGAACGCCAAAATTTGAAGGTCTTGATAACTTTTGAGATAAGGCAGAATGTTTGATCCTTGTGGGATATGATGGACCATTGGTGGATTCATGTTCATATTTGAAATCTGAGGCAAAGATATGGGAATCAGAACCTTCACTAAATAATTTGTGCAGCTGTAAAAGGGTTTATTAGTCCAAATATGGGTTTGTAAATGATTTCCACGAGCTTGATTTTGACGCTCTTCTCCTTATTACCTTCGCTTTCTTGCTTGTAAGGCCACGTTTGGGGGAATGTGGATGAAGGCATTTTGATTCATAGAATGGAATCAGAACGTGGAATTCG TTCTTAATACCTTCAAAAGAAATCCAATATTTTATTGAAGGAAATCCCAATCCAATCCCCCCAACATGACACTACACATGAAAGAACAGAAGGAGCGAATGGTCATTTTGAATTGGACTATAAAGCGAATAATAAATTCCGGCTAAAATACAAATAAAGAGAAGAAATTTAATTGGGAGGAAAACCAACAACAATATTAATAATAATTATATCAATATTGAAAAAGCAGACTCTTCTTCTACTCCCACATCGTTAAACAAAAAAAAAAAAAGAAAAAAAAAAAACTCTTTCCTCCTTTTGGTCAAAATAGTCTCACAATTTTAAAGAAAATATTAGGTGGATGGTGGACCAACCTGCTGATTCTCTGTGATCAACGGCTACGATCCTTCCTCCTGAAGGGCCATTTGTAAGCCAATGGAAGAATTTGGTACACTCTTCTTACGGTGTACTCGACTTCACACGAATAATTCCCCCCTCCCCCCACCATTCCCTCTCCTTCCCTTCCACCTACTCTGTTACTTATTCACACGCACCGCACACAACGAGAAGACCAAAATAAGCTAATTCGGCTCGGATTCTTTTATGGGTCGAGCTATCGGACCAGCATGTGACCGGAATCCCGCCGTCACGGCATCGTTGGCGCAGCAGTGAAATCCAACTGCCACCCCGGTCTCTCTCGCACTCAGGCAGTCACGGCAGGCCGTCGTCTTCGATTTCGCAGTACCGTTCCAGCCACCGTCTCCGTCTCCGCCCACCGTCAGATTCCTTAGCCCTACCCTCGTTGAGTAGTTCTCCCTCTCCAATTGCAGCTTCCGAATTCGCTCTTCGTAATCGTATCGGTCCATCGCCGGCGAGATGAAGCCGGAGAGCATTTCGTTTTCAATGCCAGCGTTTCGTCTCAACAACATCACATTCTCCGGTGGATTCTTCTTATTCGGTTGATTCGTCTTTGCCCTCGTCTTCGTCGCTGACGGGAGGTAGTATTCGTCTTCGTTGTTGTCGGTAACCTTCCGCCTCCTCTCGCGTCTCGACCGTTTCAAAACAACAAGAAAGAAGCTGTTCTTCTCGCAGGAAATTGCGCCGAAGTTGACCTTCCCGGTGATGGGGATTCTCCGCCGAATCTTCGTCGAGAAATCCAGAGACATCTTGTACTCGGCGAGGTAAACCGTGAATTGGTGCGAAGAGATTCCGATCATCTTGCTCAAATCCGACTGAAAATTCTTGAAATCCGTCAAAGAAGAAACGATGACGGAACCGATGGGGACATCTTGCTCGCCGTCGTGGAAAACGATCGGGAACGAAACGCCTCCAGCGGTCTCCACCATCGCCGCTACAAGTGAATGAATTCTTGTTCAATTGCGGAACAGAAGAAAAAATCTCGTAAAGAAGGAAGAAGAAGAAAGAAGAAGAAAGAAGAAGAAGAGGGTTTTAGAGAGAAATCTTGAAGGAGGAGGCTATGGGGGCTTTTACAGAGTGGGTTTTAGGTTTTTATGGTAAGAAGGAGAAGGCGGTGAGGGTATTTTAGGAATAAAATATCAGATTTGGGGCTTTGGTACTAAGGAAGCAAAATAGAAGAACTTGGAAGGAAATTTCAAAACGCCAAAAGAGACTTGGGAATCAAGTAAACGGAAACGACAGCGTAATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGGATTTGTCTCTTTAATCCTTCTGGAAAAATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGCGAAGATCTCACTACGGCAGCCAAGAGAGAACTCGCTGAAGAAACTGGGGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTAGTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTCCTTTTGATGTTAAGGAACCTCCTTTTTAAAACGTGTCTGGACAGAGTCGTGCATTCTTGGTATAATCTTCTTGTTTATCATTAAAGAACCTATTGCGTGCGTATTTGGTAACTGTTTTTCTTTTTTTTCTTCCTCGAAAACTTGATCAATGTTTAAGGATTATGTGTTATCCCCTTCAAGCTTCCATGTTGGTTTGATCGATCCTGAAGCTCGTGACAGGTTTCTAATGAAGTTCACCGGAAAAGAAGAAGAGATTAATCTTCTGGGTGATGGAACTGAAAGGCAAGAGTTTGGGGAGTGGTTATGGATGTCAATTGAACAGATTATGAACCAAACTGCCGATGTCCGGAAGCCTGTTTATGCACAAGTGATGAAGGAATTTGGTAACTTCATACTTGGAAATGAGTGTGATGATGTTTCTTTCAAGCAGAGTGAAACCCAATTAGTTAGCTGAAGTGTTCAAATTCTGCTATGGGAAGAAGAAAATTTATATTCATTATTCATACCACAATCATTATACGTGTACCGTATGAATCACAGGTTCGTATAAAATGTTGTATTCTTGTATCTAACTCTTGTTGTTCAAACAAGAACGCCAAAATTTGAAGGTCTTGATAACTTTTGAGATAAGGCAGAATGTTTGATCCTTGTGGGATATGATGGACCATTGGTGGATTCATGTTCATATTTGAAATCTGAGGCAAAGATATGGGAATCAGAACCTTCACTAAATAATTTGTGCAGCTGTAAAAGGGTTTATTAGTCCAAATATGGGTTTGTAAATGATTTCCACGAGCTTGATTTTGACGCTCTTCTCCTTATTACCTTCGCTTTCTTGCTTGTAAGGCCACGTTTGGGGGAATGTGGATGAAGGCATTTTGATTCATAGAATGGAATCAGAACGTGGAATTCG ATGGTTGCTTTGAGTGTGTTTGGACCAAATTGCCCCTCTTTTTCAATTGATGTCTCGTCAACGCCTCATTGGAGGGGGATTTCATCGTGTTGCTGTCTCTTCCGGCCTTCGTCTTCTTCTTCATCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAAACGTTGGGATTTGTCTCTTTAATCCTTCTGGAAAAATTTTTGCAGCTTCGAGGCTGAACAGGCCTGAAGTCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGCGAAGATCTCACTACGGCAGCCAAGAGAGAACTCGCTGAAGAAACTGGGGTAGTTTCTGCAGAAATTATTGCAGAGCTACCCTACTGGCTTAGTTACGATTTCTCGCCCGAAACCAGCATCAAACTCAGCAAACACTGGGGAGTAAGATACAAAGGCCAAACCCAAAAGTGGTATTGTCACCTGAAAATCTGGCTTCTGTCCTTTTGA MVALSVFGPNCPSFSIDVSSTPHWRGISSCCCLFRPSSSSSSSMEFPPEGYRRNVGICLFNPSGKIFAASRLNRPEVWEMPQGGVNEGEDLTTAAKRELAEETGVVSAEIIAELPYWLSYDFSPETSIKLSKHWGVRYKGQTQKWYCHLKIWLLSF Homology
BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q9CAF2 (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 7.8e-37 Identity = 81/147 (55.10%), Postives = 97/147 (65.99%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q9FNH4 (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.8e-33 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q9C6Z2 (Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.9e-31 Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q2RV14 (RNA pyrophosphohydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rppH PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20 Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy Swiss-Prot
Match: Q5FU29 (RNA pyrophosphohydrolase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rppH PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: KAG7017496.1 (Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323 bits (827), Expect = 3.67e-110 Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: XP_023528158.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305 bits (782), Expect = 1.46e-103 Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: KAG6580744.1 (Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 303 bits (775), Expect = 1.70e-102 Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: XP_022935354.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 301 bits (771), Expect = 6.92e-102 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. NCBI nr
Match: XP_022983100.1 (nudix hydrolase 26, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 300 bits (767), Expect = 2.81e-101 Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1F566 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442265 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 3.35e-102 Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1J4S6 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481747 PE=3 SV=1) HSP 1 Score: 300 bits (767), Expect = 1.36e-101 Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1DB53 (nudix hydrolase 26, chloroplastic-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1) HSP 1 Score: 247 bits (630), Expect = 4.25e-81 Identity = 118/147 (80.27%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1DC58 (nudix hydrolase 26, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1) HSP 1 Score: 247 bits (630), Expect = 9.45e-81 Identity = 118/147 (80.27%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. ExPASy TrEMBL
Match: A0A6J1DD27 (nudix hydrolase 26, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019369 PE=3 SV=1) HSP 1 Score: 225 bits (574), Expect = 2.31e-72 Identity = 111/147 (75.51%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT3G10620.1 (nudix hydrolase homolog 26 ) HSP 1 Score: 154.8 bits (390), Expect = 5.5e-38 Identity = 81/147 (55.10%), Postives = 97/147 (65.99%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT5G06340.1 (nudix hydrolase homolog 27 ) HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT1G30110.1 (nudix hydrolase homolog 25 ) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32 Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT1G30110.2 (nudix hydrolase homolog 25 ) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-32 Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Cp4.1LG03g00590 vs. TAIR 10
Match: AT4G12720.1 (MutT/nudix family protein ) HSP 1 Score: 42.7 bits (99), Expect = 3.1e-04 Identity = 18/38 (47.37%), Postives = 28/38 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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