CsGy3G001340 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCTACGCAAGCTGTTGCTTCCGGTATATTTCAGATTAATACTGCTGTTGCTACGTTTCAAAGGCTTGTTAATACCTTAGGTACACCAAAGGATACGCCTGAGCTACGCGAGAAGCTGTGAGTTTCTTTTTTTTTGGTTTTCTGTTGTTAGGGTTTCTGAATTGTATGATTTGTCGATGACATCCATGCGCGTTTTCAATGGATTATTGAATTTTGTCAATTTTTATTTGTTTGTTAAATTTTTTAACTTCTTTTTCTTTGACGAGGGTTCAATGATGTGGTTTGCTTCATGTTGATTGTTTCCGTACAAATTTTACGTTTCTTTATAGTTTTGTCTTGTATGTTATCCGCGGCGTTTGTTTTTCCTCTGCTGAAGGGATTCTCTAGGAGAAATTTCTGTTCGTCGAGAAGATCTGCATGGGAGATATACATGGTTTGGACTGGGCCATCTTGTCCTTGGGGGAAGGGTATCCTATTCCTACATTTCAATGCAGTTCCAGTTTCTAGAGCTCTAAGTGTTTGTCTCTCTGCAGTTTTGTTGGGAGCAGTATTGGAAGATAACAGAAACTATCTGAGATATTGTCAGTCCACTCGTTTGGTAATAGAAACCATATGAGGCTAGGCCACGACCTCGTCTAATGGGTTCATGTACGCGTGTGTACATATGTTGACGAAGGTTTCTTCTAGTGGTTTGAAGCCTCTTGGGTTAAGAGATGAGAATAACGATGTAGGTATTAGATAAGGAACAACTGTCTCAAAGCTACATCATGAATGTTATTTTTGTTCAATGCTATGTATTTCATCATACAAAAGGCATACTATTTCTCTCGATCTCAACCACCCTAATTATTGCTATAGCTGCATTGGCTCAAATTCTCTAGCCCCCAAGGTCAATTGGACATATCTTTGAATATTTTTTCGTTTCTTTATGCCAAATCATCCTTGAAGTAGTCTCCTCAGACCTTAGCTTTCTGCTTAAGAATTTAACCAGGGAAGAAGTTGTTTGATTTCTTCTTGTGTACTCTTGGGGAAATACCACTTGGCTTTGAAAGGTCTTTAGAGGTTTTCTCACACTCGGTTGCTGTAGGGACTTAAAAAAGAACTAATCACTGTCTTCATTGTTGCTTTACAAGTTTCATGCCAGCACAACTATAAATGGAATTTGCAATAGTAGGGCTTGTAGAAAAAGAAAAAAAAAAAAGGAACTGCTAGACTCCTCACTCCGAACATTCTATCTCTTTTAACATGATATACACAAGTATGGTTCTATATGGTTTGTAGCATTGTTTTCTCTAATATGATATTGTGATATGTTCACTAGCATACACAAAACCATCTTTCCCTTCAATATTTATTTTTTAATGCAGATAAAGAAATTTCAAAATACGTAGGATCTCATGGTAATTTCATTCTTTATTTTCGTGTGCCATTGTTATAAAATTGTAATGATGGTGGTTGTGTCCATGCAATGATTTATAATTATGAACTTCTAACTTCATAGAACTGTTGGAAATAACTTTTTTTTTAAATAAAATATGATTTTATATGACTATTACTCATTATTGAGTAATTAGATTTGCCTTTCAATTATCTTAGGCATCATAATTTTATTTGTCTTCAATTTCTGTGTTGATTTTGTTTCCTCTATAAAAAAAAAAATAATCCTTTGTTTGTCCTCCCCCCCTTGCAGGCACAAGACGAGGTTACATATTGGACAGTTGGTTAAAGACACCTCTGCTAAACTTAAACAAGCCAGTGATATAGATCATCATGCTGAAGTGAATGTAAGACTCTTCTTAACACTCCTCTATCCAGAATCCCCCACCCCCAATTGATGAGGACGGAGTATGAAAATATGAGTTAGGGCATGAAATGCATTAGATATCTATCAGTAACTTGACAATTTATCCCTCTCCTACTTTCTCAAATGTAATAATTCTGCAGGCCAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAAGAGTTTCAGAAGGCTCAACGACTTGCAGCCGAGAGGGAAACAGCATATTCACCTTTTGTTCCCCCAACTGTTCTACCTTCTAGGTATGTCTGGTTTATTATAAACATGTACTTTAAAAGAGAATAAAGAAAGAGTAATTTCATTTTATCAAAAGAGGAGGGATGTGAAAACGAGTAAGCTATTCATCCAAAGAAACACGTGGGGTTGCTCCTTATAAGTTATTTGCACGAAGTTATCTGTTGATTACAGATTTACTTGTGAATATTGATTTCCCTTGGTTTGAATACTTTATTATAATTATTAACATTGAAGTGCATTATGGTTTTGGTTGGAACCTATATACAGCTACACAGCTTGGGAGGCAGATGCAAGCTCAGAAAAGAATCTCGAACAGCGTGCCCTTCTTGTGGAATCCAGGAGGTAACAGTTTGTTCTCTGCATTTTGTTGCTAGCTGATTGTTTGTTGGGGGATATTAAGAACTTCGGGAAGTATAATGTTTATGCTGTTGAATATAGGTTTCAAATACTCTAACTATGTACTGATGAAATGATGTTGGAGTTGGACCCAGCATGCAAGAACATGATTTCATACAAGCACATAGTGCCAAGAACTGCTTATAGGAGCTAATTTTCCCTTGTCCATTAGGGGTTTTTTCTCCGTGTTACTTTGTTGCAAAAAACAAAGTACTGCATAAATCACCAGTAGCAAATGATAAAATGAAGTCTAATTATCGTGGCACTACTCTTTTTTCTTATTAGCTTCTTTTTCTTCTTAGCAAGTAATAAAAGGGAGTGAAACTATCGTGGCACCACTCTCTTTTTTTATTAGCTTCCTTTTCTTGCTTGTCAAATACAAATAGTGAATCCTAGGTTCCTTAGGATTTGGCGATGTGCTGTGCTGCATAATGTTTTCTGCCATGCCAGATACAACTTATCTAAAATTTGCTCCCTCTTTCCTACATAGCAACTTGATTTCAATTTTCCAGGTACACGAATTTCTTCTAATTCTGATATATGGTGTGTGCAGGCAAGAGGTCTTGCTGTTGGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATTTTTAAAGATCTTGCAGTTCTAGTTCATGAACAGGGGGCCATGATTGGTAAGTTACTTTAGTTTGTAAGGTTGCAGATTCTTTGTGTAGCTCAAGTTATTCATGTATATATCACCACGGTTGTAGATGATATTGGATCCAACATAGAGGGGGCACATGCTGCAACGTCACAGGGAACAACCCAGCTTGTAAAAGCTTCAAAGACACAAAGATCGAATTCATCTCTGGTGAGTCCTTACTGTTTCCTTATACTCTTCAGGAATTTATTATACTTATTATTTTTTATAGTGCCTCTGTATTGCAAGTCCTGGGCTATTAGCGGACGGTACAAAGTCTTCATTTAGTTCTGATGTTCGCATTAGGATAGGAGGGCAAAAACTCATAGGAGGGTAGAAGAGAGTGACACCCATTACCACTTCCGATTACATTTAGAGCTCTTAGAAGTTGGTTGAAGCTATGTTTAATTTATCGAAGCAAAACTTGCATACCTAACATCCATCTCATGCTCATGAATTGAATATTGAATTTCTTCTCTTCTCATTTCATTTGGAACATGGTTTTAATATCACTGTGCAACTCGAAACTACCTCAATCACGTTAGAGAATTTCCCTTTAATCAAGAGGAACCCTACAACAGTATAAGCATAACATAAACCTTTCCAACGAAATGATAATCAACTCCTTAATATCAAGAAGGGGGAGTTTTGAATCATGATTGAGTTAGTTTCACTTTTATCACAGGAAGAGAAAAACAACGAACATAGGGGAATTCTCTTGTCTAAAATTTTGTGGTTTTGATTTGATTGACAGGCTTGCTTACTTTTGGTGATATTTGGTATTATCCTCCTCATTGTGATCATAATAGTTGTTGCTTAA ATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCTACGCAAGCTGTTGCTTCCGGTATATTTCAGATTAATACTGCTGTTGCTACGTTTCAAAGGCTTGTTAATACCTTAGGTACACCAAAGGATACGCCTGAGCTACGCGAGAAGCTGCACAAGACGAGGTTACATATTGGACAGTTGGTTAAAGACACCTCTGCTAAACTTAAACAAGCCAGTGATATAGATCATCATGCTGAAGTGAATGCCAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAAGAGTTTCAGAAGGCTCAACGACTTGCAGCCGAGAGGGAAACAGCATATTCACCTTTTGTTCCCCCAACTGTTCTACCTTCTAGCTACACAGCTTGGGAGGCAGATGCAAGCTCAGAAAAGAATCTCGAACAGCGTGCCCTTCTTGTGGAATCCAGGAGGCAAGAGGTCTTGCTGTTGGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATTTTTAAAGATCTTGCAGTTCTAGTTCATGAACAGGGGGCCATGATTGATGATATTGGATCCAACATAGAGGGGGCACATGCTGCAACGTCACAGGGAACAACCCAGCTTGTAAAAGCTTCAAAGACACAAAGATCGAATTCATCTCTGGCTTGCTTACTTTTGGTGATATTTGGTATTATCCTCCTCATTGTGATCATAATAGTTGTTGCTTAA ATGAGCTTTCAAGATATCGAGGCTGGTCGCCCCTTTGCTTCTTCGAGGAGAGACCTCATCAATGGCAAACAAGATCCTACGCAAGCTGTTGCTTCCGGTATATTTCAGATTAATACTGCTGTTGCTACGTTTCAAAGGCTTGTTAATACCTTAGGTACACCAAAGGATACGCCTGAGCTACGCGAGAAGCTGCACAAGACGAGGTTACATATTGGACAGTTGGTTAAAGACACCTCTGCTAAACTTAAACAAGCCAGTGATATAGATCATCATGCTGAAGTGAATGCCAGCAAGAAAATTGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAAGAGTTTCAGAAGGCTCAACGACTTGCAGCCGAGAGGGAAACAGCATATTCACCTTTTGTTCCCCCAACTGTTCTACCTTCTAGCTACACAGCTTGGGAGGCAGATGCAAGCTCAGAAAAGAATCTCGAACAGCGTGCCCTTCTTGTGGAATCCAGGAGGCAAGAGGTCTTGCTGTTGGACAATGAAATAGCCTTCAATGAGGCAATAATTGAGGAAAGAGAGCAAGGCATTCATGAAATCCAGCAGCAAATTGGAGAAGTGAATGAAATTTTTAAAGATCTTGCAGTTCTAGTTCATGAACAGGGGGCCATGATTGATGATATTGGATCCAACATAGAGGGGGCACATGCTGCAACGTCACAGGGAACAACCCAGCTTGTAAAAGCTTCAAAGACACAAAGATCGAATTCATCTCTGGCTTGCTTACTTTTGGTGATATTTGGTATTATCCTCCTCATTGTGATCATAATAGTTGTTGCTTAA MSFQDIEAGRPFASSRRDLINGKQDPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYSPFVPPTVLPSSYTAWEADASSEKNLEQRALLVESRRQEVLLLDNEIAFNEAIIEEREQGIHEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEGAHAATSQGTTQLVKASKTQRSNSSLACLLLVIFGIILLIVIIIVVA* Homology
BLAST of CsGy3G001340 vs. ExPASy Swiss-Prot
Match: P93654 (Syntaxin-22 OS=Arabidopsis thaliana OX=3702 GN=SYP22 PE=1 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 6.5e-103 Identity = 209/274 (76.28%), Postives = 237/274 (86.50%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy Swiss-Prot
Match: O04378 (Syntaxin-23 OS=Arabidopsis thaliana OX=3702 GN=SYP23 PE=1 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 3.3e-91 Identity = 185/247 (74.90%), Postives = 211/247 (85.43%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy Swiss-Prot
Match: Q39233 (Syntaxin-21 OS=Arabidopsis thaliana OX=3702 GN=SYP21 PE=1 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 5.7e-83 Identity = 175/279 (62.72%), Postives = 220/279 (78.85%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 9.2e-49 Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy Swiss-Prot
Match: O70439 (Syntaxin-7 OS=Mus musculus OX=10090 GN=Stx7 PE=1 SV=3) HSP 1 Score: 125.6 bits (314), Expect = 8.9e-28 Identity = 88/247 (35.63%), Postives = 137/247 (55.47%), Query Frame = 0
BLAST of CsGy3G001340 vs. NCBI nr
Match: XP_004148749.1 (syntaxin-22 [Cucumis sativus]) HSP 1 Score: 505 bits (1300), Expect = 1.35e-179 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CsGy3G001340 vs. NCBI nr
Match: XP_038903117.1 (syntaxin-22 [Benincasa hispida]) HSP 1 Score: 496 bits (1276), Expect = 6.15e-176 Identity = 271/274 (98.91%), Postives = 272/274 (99.27%), Query Frame = 0
BLAST of CsGy3G001340 vs. NCBI nr
Match: XP_008448659.1 (PREDICTED: syntaxin-22 [Cucumis melo]) HSP 1 Score: 494 bits (1272), Expect = 2.50e-175 Identity = 271/274 (98.91%), Postives = 271/274 (98.91%), Query Frame = 0
BLAST of CsGy3G001340 vs. NCBI nr
Match: XP_022923460.1 (syntaxin-22-like [Cucurbita moschata] >XP_023552503.1 syntaxin-22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 490 bits (1261), Expect = 1.19e-173 Identity = 267/274 (97.45%), Postives = 271/274 (98.91%), Query Frame = 0
BLAST of CsGy3G001340 vs. NCBI nr
Match: XP_022965320.1 (syntaxin-22-like [Cucurbita maxima]) HSP 1 Score: 488 bits (1257), Expect = 4.83e-173 Identity = 266/274 (97.08%), Postives = 270/274 (98.54%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy TrEMBL
Match: A0A0A0L3W5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008910 PE=3 SV=1) HSP 1 Score: 505 bits (1300), Expect = 6.54e-180 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy TrEMBL
Match: A0A1S3BKU7 (syntaxin-22 OS=Cucumis melo OX=3656 GN=LOC103490761 PE=3 SV=1) HSP 1 Score: 494 bits (1272), Expect = 1.21e-175 Identity = 271/274 (98.91%), Postives = 271/274 (98.91%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy TrEMBL
Match: A0A6J1EBV6 (syntaxin-22-like OS=Cucurbita moschata OX=3662 GN=LOC111431150 PE=3 SV=1) HSP 1 Score: 490 bits (1261), Expect = 5.75e-174 Identity = 267/274 (97.45%), Postives = 271/274 (98.91%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy TrEMBL
Match: A0A6J1HND0 (syntaxin-22-like OS=Cucurbita maxima OX=3661 GN=LOC111465221 PE=3 SV=1) HSP 1 Score: 488 bits (1257), Expect = 2.34e-173 Identity = 266/274 (97.08%), Postives = 270/274 (98.54%), Query Frame = 0
BLAST of CsGy3G001340 vs. ExPASy TrEMBL
Match: A0A6J1CWA0 (syntaxin-22 OS=Momordica charantia OX=3673 GN=LOC111014873 PE=3 SV=1) HSP 1 Score: 483 bits (1243), Expect = 3.18e-171 Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0
BLAST of CsGy3G001340 vs. TAIR 10
Match: AT5G46860.1 (Syntaxin/t-SNARE family protein ) HSP 1 Score: 375.2 bits (962), Expect = 4.6e-104 Identity = 209/274 (76.28%), Postives = 237/274 (86.50%), Query Frame = 0
BLAST of CsGy3G001340 vs. TAIR 10
Match: AT4G17730.1 (syntaxin of plants 23 ) HSP 1 Score: 336.3 bits (861), Expect = 2.4e-92 Identity = 185/247 (74.90%), Postives = 211/247 (85.43%), Query Frame = 0
BLAST of CsGy3G001340 vs. TAIR 10
Match: AT4G17730.2 (syntaxin of plants 23 ) HSP 1 Score: 336.3 bits (861), Expect = 2.4e-92 Identity = 188/262 (71.76%), Postives = 217/262 (82.82%), Query Frame = 0
BLAST of CsGy3G001340 vs. TAIR 10
Match: AT5G16830.1 (syntaxin of plants 21 ) HSP 1 Score: 308.9 bits (790), Expect = 4.0e-84 Identity = 175/279 (62.72%), Postives = 220/279 (78.85%), Query Frame = 0
BLAST of CsGy3G001340 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative ) HSP 1 Score: 195.3 bits (495), Expect = 6.5e-50 Identity = 117/199 (58.79%), Postives = 145/199 (72.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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