CsGy3G026775.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy3G026775.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 27825373 .. 27825731 (-)
Sequence length240
RNA-Seq ExpressionCsGy3G026775.1
SyntenyCsGy3G026775.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTTGGACTCAGTTGGGCTGAAGAAGTATTGGGATATGTATGAAATGGGGTGGGGTATTTAGAAGTTGAGCCCAAGAAATGTATTTAGAATGGGCCTAATAGAGGGAGGGTACACAAATGAAGCCGACGTTTCTCGTCTCCGATTATTTTATTGAAGTTTGGTTTGTCCACAGTTACAGAGAGCTTAGTCCCTGAAACGACCAGATCTGCATTTCCTCTCTTCTTCGGGGTTGAGACTTTGAGAGTTCTTCACATCAACCAAAACGCATCAAGCTTCTCGAGATCTAATTTCACTCCTCAACCTCCACACCGAATCAGGTACTTTCTTCACTTCTCCTTCTCACCTCCAACCTAG

mRNA sequence

ATGTGTTTGGACTCAGTTGGGCTGAAGAAGTATTGGGATATGTATGAAATGGGGTGGGTTACAGAGAGCTTAGTCCCTGAAACGACCAGATCTGCATTTCCTCTCTTCTTCGGGGTTGAGACTTTGAGAGTTCTTCACATCAACCAAAACGCATCAAGCTTCTCGAGATCTAATTTCACTCCTCAACCTCCACACCGAATCAGGTACTTTCTTCACTTCTCCTTCTCACCTCCAACCTAG

Coding sequence (CDS)

ATGTGTTTGGACTCAGTTGGGCTGAAGAAGTATTGGGATATGTATGAAATGGGGTGGGTTACAGAGAGCTTAGTCCCTGAAACGACCAGATCTGCATTTCCTCTCTTCTTCGGGGTTGAGACTTTGAGAGTTCTTCACATCAACCAAAACGCATCAAGCTTCTCGAGATCTAATTTCACTCCTCAACCTCCACACCGAATCAGGTACTTTCTTCACTTCTCCTTCTCACCTCCAACCTAG

Protein sequence

MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFTPQPPHRIRYFLHFSFSPPT*
Homology
[Close]
BLAST of CsGy3G026775.1 vs. NCBI nr
Match: KGN58493.1 (hypothetical protein Csa_001315 [Cucumis sativus])

HSP 1 Score: 170 bits (431), Expect = 1.84e-53
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFT 60
          MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFT
Sbjct: 1  MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFT 60

Query: 61 PQPPHRIRYFLHFSFSPPT 79
          PQPPHRIRYFLHFSFSPPT
Sbjct: 61 PQPPHRIRYFLHFSFSPPT 79

[Close]
BLAST of CsGy3G026775.1 vs. ExPASy TrEMBL
Match: A0A0A0L9L5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651780 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 8.93e-54
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFT 60
          MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFT
Sbjct: 1  MCLDSVGLKKYWDMYEMGWVTESLVPETTRSAFPLFFGVETLRVLHINQNASSFSRSNFT 60

Query: 61 PQPPHRIRYFLHFSFSPPT 79
          PQPPHRIRYFLHFSFSPPT
Sbjct: 61 PQPPHRIRYFLHFSFSPPT 79

The following BLAST results are available for this feature:
BLAST of CsGy3G026775.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G026775.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58493.11.84e-53100.00hypothetical protein Csa_001315 [Cucumis sativus][more]
BLAST of CsGy3G026775.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9L58.93e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651780 PE=4 SV=1[more]
BLAST of CsGy3G026775.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G026775CsGy3G026775gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G026775.1.exon2CsGy3G026775.1.exon2exon
CsGy3G026775.1.exon1CsGy3G026775.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy3G026775.1cds.CsGy3G026775.1_2CDS
cds.CsGy3G026775.1cds.CsGy3G026775.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G026775.1CsGy3G026775.1-proteinpolypeptide