Cp4.1LG20g08260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g08260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	18.5 kDa class I heat shock protein-like
Location	Cp4.1LG20: 7596950 .. 7597438 (-)
RNA-Seq Expression	Cp4.1LG20g08260
Synteny	Cp4.1LG20g08260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAGCATCTTCGATCCATTTGCCACTTTCGATCTCTCAGATCCGTTCGATTTTCACTTTCCCTCTTCTATTTCATCGTACTTACCTGAAATCGCTCGAGATACTTCTGATCTGATGAACGCTCGTGTTGACTGGAAGGAGACGCCGGAGGCTCATGTAATGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAAGTGAAAGTGGAGATAGAAGATGGAAAAGTGCTTCAGATCAGCGGCCGAAGGAGCGTAGAGAAAGAGGACATAAACGAGAAATGGCATCGGATCGAGCGAAGCAGTGGAAAGTTCCAGAGGAAATTCCGGCTACCAGAGGATGCGAAAATGGAGGAAATTAGGGCATCAAGGGAGGACGGTGTTCTCACGGTGACGGTGCCCAAGGCCAAGGCGGAAGAAAAGAACGCGGATGTGAAGTCCGTTGAGATTTCCGGCTAA

mRNA sequence

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAGCATCTTCGATCCATTTGCCACTTTCGATCTCTCAGATCCGTTCGATTTTCACTTTCCCTCTTCTATTTCATCGTACTTACCTGAAATCGCTCGAGATACTTCTGATCTGATGAACGCTCGTGTTGACTGGAAGGAGACGCCGGAGGCTCATGTAATGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAAGTGAAAGTGGAGATAGAAGATGGAAAAGTGCTTCAGATCAGCGGCCGAAGGAGCGTAGAGAAAGAGGACATAAACGAGAAATGGCATCGGATCGAGCGAAGCAGTGGAAAGTTCCAGAGGAAATTCCGGCTACCAGAGGATGCGAAAATGGAGGAAATTAGGGCATCAAGGGAGGACGGTGTTCTCACGGTGACGGTGCCCAAGGCCAAGGCGGAAGAAAAGAACGCGGATGTGAAGTCCGTTGAGATTTCCGGCTAA

Coding sequence (CDS)

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAGCATCTTCGATCCATTTGCCACTTTCGATCTCTCAGATCCGTTCGATTTTCACTTTCCCTCTTCTATTTCATCGTACTTACCTGAAATCGCTCGAGATACTTCTGATCTGATGAACGCTCGTGTTGACTGGAAGGAGACGCCGGAGGCTCATGTAATGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAAGTGAAAGTGGAGATAGAAGATGGAAAAGTGCTTCAGATCAGCGGCCGAAGGAGCGTAGAGAAAGAGGACATAAACGAGAAATGGCATCGGATCGAGCGAAGCAGTGGAAAGTTCCAGAGGAAATTCCGGCTACCAGAGGATGCGAAAATGGAGGAAATTAGGGCATCAAGGGAGGACGGTGTTCTCACGGTGACGGTGCCCAAGGCCAAGGCGGAAGAAAAGAACGCGGATGTGAAGTCCGTTGAGATTTCCGGCTAA

Protein sequence

MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKETPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFRLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG

Homology

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.3e-54
Identity = 110/164 (67.07%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPF-DFHFPSSISS-YLPEIARDTSDLMNARVDWK 60
           MS+IP+FFGGRR+++FDPF + D+ DPF DF FP+++SS   PE +R+ S  ++ RVDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPF-SLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRK 120
           ETPEAHV KAD+PGLKKEEVKV+IED KVLQISG R+VEKED N+ WHR+ERSSGKF R+
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           FRLPE+AK+E+++AS E+GVLTVTVP  K E K  DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVP--KEEVKKPDVKAIEISG 161

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 107/162 (66.05%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MS+IPS FGGRRS++FDPF+  DL DPF+  F  S +      ARD +   NARVDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV KADLPGLKKEEVKVE+ED  VLQISG RS E E+ N+KWHR+ER+SGKF R+FR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           LPE+AKMEE++A+ E+GVLTV VP  KA EK   VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVP--KAPEKKPQVKSIDISG 159

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 106/163 (65.03%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPF-DFHFPSSISSYLPEIARDTSDLMNARVDWKE 60
           MS+IPS FGGRRS++FDPF + D+ DPF DFHFP+S+S+       + S  +N RVDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPF-SLDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKF 120
           TPEAHV +AD+PGLKKEEVKV+IED +VLQISG R++EKED N+ WHR+ERSSG F R+F
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           RLPE+AK+E+++AS E+GVLTVTVP  K E K  DVK++EISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVP--KEEVKKPDVKAIEISG 153

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.8e-51
Identity = 107/163 (65.64%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPF-DFHFPSSISSYLPEIARDTSDLMNARVDWKE 60
           MS+IPSFFGGRRSS+FDPF + D+ DPF DF FPSS+S+       + S  ++ RVDWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPF-SLDVWDPFKDFPFPSSLSA-------ENSAFVSTRVDWKE 60

Query: 61  TPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKF 120
           TPEAHV KAD+PGLKKEEVK+EI+DG+VLQISG R+VEKED N+ WHR+ERSSGK  R+F
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           RLPE+AK+++++AS E+GVLTVTVP  K E K  DVK+++ISG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVP--KEEIKKPDVKAIDISG 153

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.8e-51
Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPF-DFHFPSSISSYLPEIARDTSDLMNARVDWKE 60
           MS+IP FFGGRRS++FDPF + D+ DPF DFH P+S       ++ + S  ++ RVDWKE
Sbjct: 1   MSLIPGFFGGRRSNVFDPF-SLDMWDPFKDFHVPTS------SVSAENSAFVSTRVDWKE 60

Query: 61  TPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKF 120
           TPEAHV KAD+PGLKKEEVKV+IED +VLQISG R+VEKED N+ WHR+ERSSGKF R+F
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           RLPE+AK+ E++AS E+GVLTVTVP  K E K  DVK++EISG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVTVP--KEEVKKPDVKAIEISG 154

[Close]

BLAST of Cp4.1LG20g08260 vs. NCBI nr
Match: XP_023519237.1 (17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309 bits (791), Expect = 9.92e-106
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG
Sbjct: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162

[Close]

BLAST of Cp4.1LG20g08260 vs. NCBI nr
Match: XP_023522284.1 (17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306 bits (785), Expect = 8.15e-105
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRAS EDGVLTVTVPKAKAEEKNADVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNADVKSVEISG 162

[Close]

BLAST of Cp4.1LG20g08260 vs. NCBI nr
Match: XP_022964897.1 (18.5 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6583397.1 18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (749), Expect = 2.52e-99
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDL DPFDFHFPSSISSY PEIARDTSDLMNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHVMKADLPGLKK+EVKVEIE+GKVLQISGRRSVEKEDINEKWHRIERSSGKFQ +FR
Sbjct: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRAS EDGVLTVTVPKAKAEEKNA+VKSVEISG
Sbjct: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 162

[Close]

BLAST of Cp4.1LG20g08260 vs. NCBI nr
Match: ADU55790.1 (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 271 bits (693), Expect = 8.08e-91
Identity = 140/162 (86.42%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDLSDPFDFHFPSSISS+ PEIAR+TS ++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV+KADLPGLKKEEVKVE+EDGKV+QISG RS+EKED NEKWHRIERSSGKFQR+FR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRAS E+GVLTVTVP  KAE+K  DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVP--KAEQKKTDVKTVEISG 160

[Close]

BLAST of Cp4.1LG20g08260 vs. NCBI nr
Match: XP_008457420.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97355.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 271 bits (692), Expect = 1.15e-90
Identity = 141/162 (87.04%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDLSDPFDFHFPSSISS+ PEIAR+TS ++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISG RSVEKED NEKWHR+ERSSGKF+R+FR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           +PED KMEEIRAS E+GVLTVTVP  KAEEK ADVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVP--KAEEKKADVKSVEISG 160

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy TrEMBL
Match: A0A6J1HIX6 (18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111464865 PE=3 SV=1)

HSP 1 Score: 293 bits (749), Expect = 1.22e-99
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDL DPFDFHFPSSISSY PEIARDTSDLMNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHVMKADLPGLKK+EVKVEIE+GKVLQISGRRSVEKEDINEKWHRIERSSGKFQ +FR
Sbjct: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRAS EDGVLTVTVPKAKAEEKNA+VKSVEISG
Sbjct: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 162

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy TrEMBL
Match: H6TB43 (HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 271 bits (693), Expect = 3.91e-91
Identity = 140/162 (86.42%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDLSDPFDFHFPSSISS+ PEIAR+TS ++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV+KADLPGLKKEEVKVE+EDGKV+QISG RS+EKED NEKWHRIERSSGKFQR+FR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRAS E+GVLTVTVP  KAE+K  DVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVP--KAEQKKTDVKTVEISG 160

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy TrEMBL
Match: A0A5D3BFY1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001650 PE=3 SV=1)

HSP 1 Score: 271 bits (692), Expect = 5.56e-91
Identity = 141/162 (87.04%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDLSDPFDFHFPSSISS+ PEIAR+TS ++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISG RSVEKED NEKWHR+ERSSGKF+R+FR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           +PED KMEEIRAS E+GVLTVTVP  KAEEK ADVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVP--KAEEKKADVKSVEISG 160

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy TrEMBL
Match: A0A1S3C522 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112 PE=3 SV=1)

HSP 1 Score: 271 bits (692), Expect = 5.56e-91
Identity = 141/162 (87.04%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDLSDPFDFHFPSSISS+ PEIAR+TS ++NARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISG RSVEKED NEKWHR+ERSSGKF+R+FR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           +PED KMEEIRAS E+GVLTVTVP  KAEEK ADVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVP--KAEEKKADVKSVEISG 160

[Close]

BLAST of Cp4.1LG20g08260 vs. ExPASy TrEMBL
Match: A0A6J1HK86 (18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111464867 PE=3 SV=1)

HSP 1 Score: 264 bits (674), Expect = 3.08e-88
Identity = 138/162 (85.19%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MSMIPSFFGG+RSSIFDPFATFDLSDPFDFHFPSS+SS+ PEIAR+TS ++NARVDWKET
Sbjct: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV+KADLPGLKKEEVKVEIEDGKV+QISG R VEKE+ NEKWHR+ERSSG FQR+FR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162
           LPEDAKMEEIRAS E+GVLTVTVP  KAEE+  DVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVP--KAEERKMDVKSVEISG 160

[Close]

BLAST of Cp4.1LG20g08260 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-52
Identity = 107/162 (66.05%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MS+IPS FGGRRS++FDPF+  DL DPF+  F  S +      ARD +   NARVDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV KADLPGLKKEEVKVE+ED  VLQISG RS E E+ N+KWHR+ER+SGKF R+FR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           LPE+AKMEE++A+ E+GVLTV VP  KA EK   VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVP--KAPEKKPQVKSIDISG 159

[Close]

BLAST of Cp4.1LG20g08260 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 196.1 bits (497), Expect = 2.3e-50
Identity = 104/163 (63.80%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFD-FHFPSSISSYLPEIARDTSDLMNARVDWKE 60
           MS+IPS FGGRR+++FDPF + D+ DPF+ F  PS +++     A D +   NA+VDW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPF-SLDVFDPFEGFLTPSGLAN---APAMDVAAFTNAKVDWRE 60

Query: 61  TPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKF 120
           TPEAHV KADLPGL+KEEVKVE+EDG +LQISG RS E E+ N+KWHR+ERSSGKF R+F
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           RLPE+AKMEEI+AS E+GVL+VTVP  K  EK  +VKS++ISG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVP--KVPEKKPEVKSIDISG 157

[Close]

BLAST of Cp4.1LG20g08260 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-49
Identity = 106/163 (65.03%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MSMIPSFF-GGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKE 60
           MSMIPSFF   RRS+IFDPF + D+ DPF     SS+S       R+ S ++NARVDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPF-SLDVWDPFKELTSSSLS-------RENSAIVNARVDWRE 60

Query: 61  TPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKF 120
           TPEAHV KADLPGLKKEEVKVEIE+  VL+ISG R VEKED N+ WHR+ERSSG+F R+F
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           RLPE+ KM++++A+ E+GVLTVTVP  KAE K ADVKS++ISG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVP--KAETKKADVKSIQISG 153

[Close]

BLAST of Cp4.1LG20g08260 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 190.7 bits (483), Expect = 9.5e-49
Identity = 97/162 (59.88%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60
           MS++PSFFGGRR+++FDPF + D+ DPF+      +++     A+D +   NA+VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPF-SLDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120
           PEAHV KAD+PGLKKEEVKVE+EDG +LQISG RS E E+ ++ WHR+ERSSGKF R+FR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           LPE+AK+EE++AS E+GVL+VTVP  K +E   +VKSV+ISG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVP--KVQESKPEVKSVDISG 156

[Close]

BLAST of Cp4.1LG20g08260 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 103/165 (62.42%), Postives = 128/165 (77.58%), Query Frame = 0


Query: 1   MSMIPSFFGGRR--SSIFDPFATFDLSDPF-DFHFPSSISSYLPEIARDTSDLMNARVDW 60
           MS+IPSFFG  R  +SIFDPF + D+ DPF +  FPSS+S        +TS + NARVDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPF-SLDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQR 120
           KET EAHV KADLPG+KKEEVKVEIED  VL+ISG R VEKE+  + WHR+ERSSG+F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 KFRLPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 163
           KF+LPE+ KM++++AS E+GVLTVTVPK +  +K A VKS++ISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g08260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05478	7.3e-54	67.07	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P19037	3.4e-51	66.05	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P04793	3.4e-51	65.03	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
P02519	5.8e-51	65.64	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P04794	5.8e-51	65.03	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]

BLAST of Cp4.1LG20g08260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519237.1	9.92e-106	100.00	17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_023522284.1	8.15e-105	99.38	17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964897.1	2.52e-99	94.44	18.5 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6583397.1 18.5...	[more]
ADU55790.1	8.08e-91	86.42	HSP18.2A [Citrullus lanatus]	[more]
XP_008457420.1	1.15e-90	87.04	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1...	[more]

BLAST of Cp4.1LG20g08260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIX6	1.22e-99	94.44	18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
H6TB43	3.91e-91	86.42	HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3BFY1	5.56e-91	87.04	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C522	5.56e-91	87.04	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112...	[more]
A0A6J1HK86	3.08e-88	85.19	18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Cp4.1LG20g08260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	2.4e-52	66.05	heat shock protein 18.2	[more]
AT1G53540.1	2.3e-50	63.80	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	7.2e-49	65.03	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	9.5e-49	59.88	heat shock protein 17.4	[more]
AT1G07400.1	1.6e-48	62.42	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..162 e-value: 1.1E-44 score: 153.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 27..152
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..161 e-value: 5.3E-29 score: 100.4
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 46..161 score: 30.413017
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..162
None	No IPR available	PANTHER	PTHR11527:SF319	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..162
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 54..145 e-value: 9.08852E-50 score: 153.229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g08260.1	Cp4.1LG20g08260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding