Cp4.1LG20g07350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g07350
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LEA_2 domain-containing protein
Location	Cp4.1LG20: 6131501 .. 6132394 (-)
RNA-Seq Expression	Cp4.1LG20g07350
Synteny	Cp4.1LG20g07350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACACAACAAATCAAACCCAACAAAAAAACACAACATTTGTTGAAGAACATGAGGAGCAATACACAAGGAGAAGCATCATCATCAACAACCTCCATCATTGAGGCACCAAAACCAAGCTCCTATGGACATCAACATGGGACAGCAAAACGCACCAAGCTCATGAGAATCATAGGACGAAGCTTGTTGGCTGTCATGTTCCTTGTCGGTCTTGCTATTGTCATTTGTTGGCTTGTTGTCTTCCCCAAAACCCCAAATCTTATATTGGAAAATGGCCATGTAACACCCCATAGCTTAACTGATAGAAAGCTCAATGCCTCCATATCTTTCACTATCAAAAGCTATAACCCTAACAAAAGAGCCTCCATTCATATGGATTCTATGAAGATGACACTTGATGATATGGGTCAGACGTTTACCACCACGATCCCTACGTTCACGCAACCGCCCGGAAACCAAACCTTCTTGAACCCCACCGTCGAAGTCAACTTCATTTACCCTTTCGGGCAAATGAAAGATTTGATGCTATCAGATGGGTTGAATCCCGAACTTCACTTCTCAGCTCATGTCAGGTATAAACATTTGACTTTTAAGATAGATATATAACATATCAGTATCCCATCAAATTTAGCTTCCATCTCATTTTTGTCTCGCTCTGTTTCTATCAGTTACATTGTCGAGAAATGGGCATCGAAACGTCGGTCGCTAGAGATCTATTGTGATCGAGTCAGACTTAAGATCAATGGTTCAACACCTTTTGATAATACAAAATGCAAAGTGGATCTTTGAGATATGATCCGAGTTTGTTCTTAGCTGCATAATCCCGAAGATTTGTAACTCGAAGTAAAACAATAATTCTTTCTTCCATTTGAAGTCTGATTTATTTTTTGTTTCTT

mRNA sequence

GACACAACAAATCAAACCCAACAAAAAAACACAACATTTGTTGAAGAACATGAGGAGCAATACACAAGGAGAAGCATCATCATCAACAACCTCCATCATTGAGGCACCAAAACCAAGCTCCTATGGACATCAACATGGGACAGCAAAACGCACCAAGCTCATGAGAATCATAGGACGAAGCTTGTTGGCTGTCATGTTCCTTGTCGGTCTTGCTATTGTCATTTGTTGGCTTGTTGTCTTCCCCAAAACCCCAAATCTTATATTGGAAAATGGCCATGTAACACCCCATAGCTTAACTGATAGAAAGCTCAATGCCTCCATATCTTTCACTATCAAAAGCTATAACCCTAACAAAAGAGCCTCCATTCATATGGATTCTATGAAGATGACACTTGATGATATGGGTCAGACGTTTACCACCACGATCCCTACGTTCACGCAACCGCCCGGAAACCAAACCTTCTTGAACCCCACCGTCGAAGTCAACTTCATTTACCCTTTCGGGCAAATGAAAGATTTGATGCTATCAGATGGGTTGAATCCCGAACTTCACTTCTCAGCTCATGTCAGTTACATTGTCGAGAAATGGGCATCGAAACGTCGGTCGCTAGAGATCTATTGTGATCGAGTCAGACTTAAGATCAATGGTTCAACACCTTTTGATAATACAAAATGCAAAGTGGATCTTTGAGATATGATCCGAGTTTGTTCTTAGCTGCATAATCCCGAAGATTTGTAACTCGAAGTAAAACAATAATTCTTTCTTCCATTTGAAGTCTGATTTATTTTTTGTTTCTT

Coding sequence (CDS)

ATGAGGAGCAATACACAAGGAGAAGCATCATCATCAACAACCTCCATCATTGAGGCACCAAAACCAAGCTCCTATGGACATCAACATGGGACAGCAAAACGCACCAAGCTCATGAGAATCATAGGACGAAGCTTGTTGGCTGTCATGTTCCTTGTCGGTCTTGCTATTGTCATTTGTTGGCTTGTTGTCTTCCCCAAAACCCCAAATCTTATATTGGAAAATGGCCATGTAACACCCCATAGCTTAACTGATAGAAAGCTCAATGCCTCCATATCTTTCACTATCAAAAGCTATAACCCTAACAAAAGAGCCTCCATTCATATGGATTCTATGAAGATGACACTTGATGATATGGGTCAGACGTTTACCACCACGATCCCTACGTTCACGCAACCGCCCGGAAACCAAACCTTCTTGAACCCCACCGTCGAAGTCAACTTCATTTACCCTTTCGGGCAAATGAAAGATTTGATGCTATCAGATGGGTTGAATCCCGAACTTCACTTCTCAGCTCATGTCAGTTACATTGTCGAGAAATGGGCATCGAAACGTCGGTCGCTAGAGATCTATTGTGATCGAGTCAGACTTAAGATCAATGGTTCAACACCTTTTGATAATACAAAATGCAAAGTGGATCTTTGA

Protein sequence

MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL

Homology

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BLAST of Cp4.1LG20g07350 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 54/179 (30.17%), Postives = 84/179 (46.93%), Query Frame = 0


Query: 44  SLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSL--TDRKLNASISFTIKSYNPN 103
           +L+ +  LVGLAI+I +L + PK     +E   V   ++   D  +NA  S+ IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 104 KRASIHMDSMKMTLDDMGQTFT-TTIPTFTQPPGNQTFL-NPTVEVNFIYPFGQMKDLML 163
           K  S+   SM+++     Q+     I  F Q P N+T +    V  N        +DL  
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 164 SDG---LNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGST--PFDNTKCKVDL 214
                 +  E++ +A VSY    + S+RR+L+  C  V + +  S+   F    CK  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

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BLAST of Cp4.1LG20g07350 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 29  HGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTDRK-- 88
           HG ++R KL+R I  S++ V+F++ L I++ W ++ P  P  IL++  V   +++     
Sbjct: 7   HGHSRR-KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPN 66

Query: 89  -LNASISFTIKSYNPNKRASIHMDSMKM--TLDDMGQTFTTTIP 128
            L ++   T+ S NPN +  I+ D + +  T      TF T+IP
Sbjct: 67  LLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIP 109

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BLAST of Cp4.1LG20g07350 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425 bits (1092), Expect = 6.10e-150
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW
Sbjct: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG20g07350 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019294.1 NDR1/HIN1-like protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416 bits (1070), Expect = 1.38e-146
Identity = 210/213 (98.59%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MRSNTQ EASSSTTSIIEAPKPSSYG QHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TF TTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG20g07350 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima])

HSP 1 Score: 404 bits (1038), Expect = 1.04e-141
Identity = 204/213 (95.77%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MR+NTQGEASSS+TSIIEAPKPS Y  QHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRNNTQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TF TTIPTFTQ PGNQTFL PTVEVNFIYPFGQMKDLMLS+GLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG20g07350 vs. NCBI nr
Match: XP_038895440.1 (uncharacterized protein LOC120083674 [Benincasa hispida])

HSP 1 Score: 275 bits (704), Expect = 6.35e-91
Identity = 138/214 (64.49%), Postives = 166/214 (77.57%), Query Frame = 0


Query: 1   MRSNT-QGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVIC 60
           MR  T QGEASSS+       K SSY  +HGTAKRTKL+RI GRSLL +M LVG+ I+IC
Sbjct: 1   MRGTTIQGEASSSS-------KESSYVQEHGTAKRTKLLRITGRSLLGIMILVGIGIIIC 60

Query: 61  WLVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMG 120
           WL+VFPKTPNL +E+G V PH LTDRKL A+I+FT+KSYNPNKRA+IHMDSM M + DMG
Sbjct: 61  WLIVFPKTPNLTVESGQVIPHRLTDRKLQATIAFTVKSYNPNKRATIHMDSMMMIVTDMG 120

Query: 121 QTFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEK 180
           QTF + IP FTQPPGNQT     ++ NFIYPFG MK+ + ++G++P+L FSA VSYI+++
Sbjct: 121 QTFASVIPNFTQPPGNQTVWTSAIQGNFIYPFGHMKEFVKAEGISPDLRFSAKVSYIMKR 180

Query: 181 WASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           W SK R LEIYC  +RLK N STPFDN KC VDL
Sbjct: 181 WTSKARILEIYCGGLRLKFNDSTPFDNKKCTVDL 207

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BLAST of Cp4.1LG20g07350 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 protein YLS9-like [Cucumis melo var. makuwa] >TYK08768.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (663), Expect = 1.13e-84
Identity = 127/209 (60.77%), Postives = 164/209 (78.47%), Query Frame = 0


Query: 5   TQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64
           TQGE SSS+   I      SY  +HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 6   TQGEPSSSSAKEI------SYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65

Query: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTT 124
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125

Query: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185

Query: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           R LE+YCD +RLK N ST FDN KCKVDL
Sbjct: 186 RLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of Cp4.1LG20g07350 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 6.68e-147
Identity = 210/213 (98.59%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MRSNTQ EASSSTTSIIEAPKPSSYG QHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TF TTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG20g07350 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 5.06e-142
Identity = 204/213 (95.77%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MR+NTQGEASSS+TSIIEAPKPS Y  QHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRNNTQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TF TTIPTFTQ PGNQTFL PTVEVNFIYPFGQMKDLMLS+GLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG20g07350 vs. ExPASy TrEMBL
Match: A0A5D3CC54 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00190 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 5.46e-85
Identity = 127/209 (60.77%), Postives = 164/209 (78.47%), Query Frame = 0


Query: 5   TQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64
           TQGE SSS+   I      SY  +HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 6   TQGEPSSSSAKEI------SYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65

Query: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTT 124
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125

Query: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185

Query: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           R LE+YCD +RLK N ST FDN KCKVDL
Sbjct: 186 RLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of Cp4.1LG20g07350 vs. ExPASy TrEMBL
Match: A0A1S3CGQ5 (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 5.46e-85
Identity = 127/209 (60.77%), Postives = 164/209 (78.47%), Query Frame = 0


Query: 5   TQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64
           TQGE SSS+   I      SY  +HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 6   TQGEPSSSSAKEI------SYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65

Query: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTT 124
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125

Query: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185

Query: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 213
           R LE+YCD +RLK N ST FDN KCKVDL
Sbjct: 186 RLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

[Close]

BLAST of Cp4.1LG20g07350 vs. ExPASy TrEMBL
Match: A0A0A0LSV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 4.17e-83
Identity = 120/193 (62.18%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 21  KPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPH 80
           K  SY  +HGTAKRT+++RI GR+LL +M LV +A++ICWL+VFP+ P++I+E G V PH
Sbjct: 20  KEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPH 79

Query: 81  SLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTTTIPTFTQPPGNQTFLN 140
           SLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F + IP+FTQPP N+T L 
Sbjct: 80  SLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLT 139

Query: 141 PTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKING 200
            T++ NFIYPFG MK+LM  +G++PEL FSA VSYI+E+W S+ R +E+YCD +RLK N 
Sbjct: 140 STIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFND 199

Query: 201 STPFDNTKCKVDL 213
           ST FDN KCKVDL
Sbjct: 200 STVFDNKKCKVDL 212

[Close]

BLAST of Cp4.1LG20g07350 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-13
Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 0


Query: 33  KRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLT-DRKLNASI 92
           +R  L+  I   +L ++F+  +  +I WL   PK     +EN  V   +LT D  ++A+ 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 93  SFTIKSYNPNKRASIHMDSMKMTLDDMGQTFT-TTIPTFTQPPGNQTFLNPT-VEVNFIY 152
            FTI+S+NPN R S++  S+++ +    QT    T+  F QP  N   ++ T +  N   
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query: 153 PFGQMKDLMLSDGLNP---ELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTPFDN 212
                KDL   + L     E+   A V + V  W S  R+ +I C  V + ++      N
Sbjct: 141 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQN 200

Query: 213 TKCKVDL 214
           + C  D+
Sbjct: 201 SSCDADI 207

[Close]

BLAST of Cp4.1LG20g07350 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 65.1 bits (157), Expect = 7.9e-11
Identity = 54/179 (30.17%), Postives = 84/179 (46.93%), Query Frame = 0


Query: 44  SLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSL--TDRKLNASISFTIKSYNPN 103
           +L+ +  LVGLAI+I +L + PK     +E   V   ++   D  +NA  S+ IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 104 KRASIHMDSMKMTLDDMGQTFT-TTIPTFTQPPGNQTFL-NPTVEVNFIYPFGQMKDLML 163
           K  S+   SM+++     Q+     I  F Q P N+T +    V  N        +DL  
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 164 SDG---LNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGST--PFDNTKCKVDL 214
                 +  E++ +A VSY    + S+RR+L+  C  V + +  S+   F    CK  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Cp4.1LG20g07350 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-05
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 29  HGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTDRK-- 88
           HG ++R KL+R I  S++ V+F++ L I++ W ++ P  P  IL++  V   +++     
Sbjct: 7   HGHSRR-KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPN 66

Query: 89  -LNASISFTIKSYNPNKRASIHMDSMKM--TLDDMGQTFTTTIP 128
            L ++   T+ S NPN +  I+ D + +  T      TF T+IP
Sbjct: 67  LLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIP 109

[Close]

BLAST of Cp4.1LG20g07350 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 46.6 bits (109), Expect = 2.9e-05
Identity = 30/107 (28.04%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 22  PSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHS 81
           P SY  + G         I G ++  ++ ++G+  +I WLV  P  P L +    +   +
Sbjct: 26  PESYSKEGGGGGGDARRAICG-AIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLN 85

Query: 82  LTDRKL-NASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFTTTIP 128
            T   L + S+ F++ + NPN+R SIH D + M +    Q  T  +P
Sbjct: 86  FTAPPLISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLP 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g07350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	1.1e-09	30.17	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9SRN0	1.4e-04	30.77	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]

BLAST of Cp4.1LG20g07350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520091.1	6.10e-150	100.00	uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964992.1	1.38e-146	98.59	uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/H...	[more]
XP_022970341.1	1.04e-141	95.77	uncharacterized protein At1g08160-like [Cucurbita maxima]	[more]
XP_038895440.1	6.35e-91	64.49	uncharacterized protein LOC120083674 [Benincasa hispida]	[more]
XP_008462326.1	1.13e-84	60.77	PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 pro...	[more]

BLAST of Cp4.1LG20g07350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ52	6.68e-147	98.59	uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1I0B9	5.06e-142	95.77	uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693...	[more]
A0A5D3CC54	5.46e-85	60.77	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00...	[more]
A0A1S3CGQ5	5.46e-85	60.77	uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=...	[more]
A0A0A0LSV0	4.17e-83	62.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]

BLAST of Cp4.1LG20g07350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	2.2e-13	28.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	7.9e-11	30.17	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	1.0e-05	30.77	NDR1/HIN1-like 1	[more]
AT4G01410.1	2.9e-05	28.04	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 94..188 e-value: 6.4E-10 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 29..212
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 29..212
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 50..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g07350.1	Cp4.1LG20g07350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane