Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAATCAACCAAGAAGAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAAGAAGAAAAAGTGGGAACAAATTGCAGTATTGTTAAGAGTGTTATGGAGTGCAAAGTGTTTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGACAAAGAATTGGTAG mRNA sequence ATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAATCAACCAAGAAGAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAAGAAGAAAAAGTGGGAACAAATTGCAGTATTGTTAAGAGTGTTATGGAGTGCAAAGTGTTTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGACAAAGAATTGGTAG Coding sequence (CDS) ATGACCAATTGTTCCTTCTCGATGAGTGGTACAACAATTTCTTCAACATCATCCAATTCCCGCTACTTGAAGAAGCTCAAGAACCTGAAATCAAGAAAGAAATCAACCAAGAAGAAACCAAAGATCGTCATGATCATCATTGTGATATTATTGAAAATGGGATCAGTACAAGAAATATCTCAAAAGAAGAAAAAGTGGGAACAAATTGCAGTATTGTTAAGAGTGTTATGGAGTGCAAAGTGTTTGAAGATGAAGAGAAAATGGATTTGCTTTGGGAAAAGTATGAGGACAAAGAATTGGTAG Protein sequence MTNCSFSMSGTTISSTSSNSRYLKKLKNLKSRKKSTKKKPKIVMIIIVILLKMGSVQEISQKKKKWEQIAVLLRVLWSAKCLKMKRKWICFGKSMRTKNW*
Homology
BLAST of CsGy7G013105 vs. NCBI nr
Match: KAE8646254.1 (hypothetical protein Csa_015547 [Cucumis sativus]) HSP 1 Score: 189 bits (480), Expect = 2.80e-60 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MTNCSFSMSGTTISSTSSNSRYLKKLKNLKSRKKSTKKKPKIVMIIIVILLKMGSVQEIS 60
MTNCSFSMSGTTISSTSSNSRYLKKLKNLKSRKKSTKKKPKIVMIIIVILLKMGSVQEIS
Sbjct: 1 MTNCSFSMSGTTISSTSSNSRYLKKLKNLKSRKKSTKKKPKIVMIIIVILLKMGSVQEIS 60
Query: 61 QKKKKWEQIAVLLRVLWSAKCLKMKRKWICFGKSMRTKNW 100
QKKKKWEQIAVLLRVLWSAKCLKMKRKWICFGKSMRTKNW
Sbjct: 61 QKKKKWEQIAVLLRVLWSAKCLKMKRKWICFGKSMRTKNW 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646254.1 | 2.80e-60 | 100.00 | hypothetical protein Csa_015547 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 19..39 |
Relationships
The following mRNA feature(s) are a part of this gene:
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