CsGy4G004950 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G004950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	DNA-directed RNA polymerase III subunit RPC5 isoform X1
Location	Gy14Chr4: 3511512 .. 3519778 (-)
RNA-Seq Expression	CsGy4G004950
Synteny	CsGy4G004950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAATAAACCTAAAAAAAGAGCATACAGAAAATTTATGGGTGCGGCGGTCTAAGTTATCTCTCCGCCGGAGCAGTTGGTGGTTGCGGAAAGAAAAAACTTCGATTGCATATTCTCTAGTGTCCGATAAGCTTTTCGCTGCTGATTCACCAAGAGGAAGGAGCACGTCAAAAACCTTTCAGGATGGACCTGGACGGCCTAGACGAAGGGAGCCAGGTACCATCACGGACCTCCAGATTCGCACCCAAGTCCTCTAAATTCAAGCCGAAACCAAAATCGGAAGTAGTTCCGAAACCGGAGCCCCAACAGCCGCTAACGAAGTTGGAACCTCAACCTCCCATTTCTAAGCCGGAAGTTGTAGAGCCTGATGCTCGAGTTGAGGAGAAGAAGGAAGACGGTGAAGAAGTAGAAGTAAAACCTAAAGTTGAATCCTCACTTCCTAATGGAGTTGCTAAAATGGACGTTGAAACTAAGTCGGAAGTTGAAGAGGATGCAATGGTGGATGATGATCCAATTGAAGAGGATGCTTCTGAAGATATGGTTGTTCGTGAAATCGACGTTCTATTTACTCCTTCAGTTGATAGCAATTCGAAAGTTAGTCTTCTTTGCCTTTGTCTTTCATACCTTGTACCATTATTTAGTTCTTTTTGAAATTTTAACTTGACTGTCATCTATTTCCAGTTATATGTGTTGCAATATCCTCTTAGACCACGCTGGAGGCCCTATGAATTCGAGGGGCGATGTGACGAGGTGAGCATTTTCTTTAATTCCTTATTATTCTGGAAGAATTTGAACTGTACTCTTTTAGTTTCAACAGGTAAGAGTTAAACCTAGCACTGGAGAAGTGGAAGTCGACCTGAATGTTGATATTGAATCCAATAACTATGACAACAAAGCTGATGGCACATTCCAAATGAAGAAGCAGGTATCTTCTCTTACTGTTCTGTTGATTTAAATTGCTGCGAATTCATGCATATTTGGCTATTTATTAGGATTACTAGTCTGGTTCATCTGTGTGATTGAACTTGCAGATCATGTCAGGTTTAACTTGAAAAAACATGCTACATTCGTTAGGATTTTCCCAAAAGATAAAACAGTGATAGTTCATTGAAACCGAATTCAGCAACAGTTTCTAGTTGAATCTTCTTTCTTTTCTTTCTTTTTTTCCCGTCGTATTATCCTTGAGTTTCTTTTCACTTTATCAACTTAACTATGTTTCACCTATTAATTAGTCATGGGCTATTTCTTTCATGTACTATATTCAACAGAGGATTGATTTATTGGCAGTGTATTTTTGTGGATACCAATAAAATTTTGTTTTTGGTTCAGACTTTGACATCTTCATGGCAACCGCCTCTAGCTACGTCCTATGCTGTTGGTCTGCTTATGGGCAATAAGGTTGCTTCTCTCTATCTCATATCTTTTGAACTGCACACCTTTTCTTTTCTTCTTCTTCTTTTTATGATTGACATTGAATCAACCGTAGTTAATGGACCCTTAGTTTCTTCATTGTTCTAGCACTCAGTCATTTTTAATTTTGAATCAGAAAACATAAGCGTAGTGGTAAGCAAGAATAATAAAGTTCTTGGAGGAAATAGGTTCAAGCCACGGTGGCCTTACCTTAGATTTAATATACTACGAGCTTTATTAACAATGAAATGTAGTAGGGTTAGACAGGGTCCTATGAGAATAGACAAGGTACACAAATGACACGGACTCTCACATAAATAGAAAAGAATAATATTGAAATATTAAGTAACCATGAATAAAAGGTTTCCATAAAAGTTTTGATTATTGGAAGAATAGTTACAAACACTTCTTACGTATTACAATATGAGCTCACATTTCGCTTAACAATATCATATTTATCTACCAAAGAAGGTTGTTTGCCTTAAAATAAATGTTGATTATTATTCAACTTATTGCCTCCTCAAAATTGACTTGACCGTCTATATTCTTAAATTTTGTCTTCTTAAAACTTTGATGGTGAAGGAAATGGAAAATATGTAAAATCTTGGCATATGTTGCCTTTTTCTCAAAAGGAAACAACAGATATTTTGGTCTTTTGTTGTCATTGTTTGGATATTTTTCTTTTGTTTTACTAAGGAGAAGGGATTCTTGTTCATGAGGCCTTGATCCTGTGGTGGGGTTTTCTTGCAAATACTTTTTTTGTTGTTTAGTGGAACACTTTTTTGTTGCTATGAAAGATTAAAATTTCTTGAAGGTTATATTTTTATTCCAGAAGTTCTTCACAGTAGAGTTTATACTTTAGATCACATTATGAGGATCTTATACTGTTGTATCTGTAATTGTTTGAATGGAAAACCTAGATTTTGTACTTGGTCAAATTGGTCCTTTTCTTCTAACTAATTAGCATGAACGCAAGAGGATCATAGGTTTCTGCTTATTCCCCTAATCTTATGATGGTCATCAAATCATTTGTCAAATTTTAGAACAAGGACCTGTTTGTTTAGTTTTCCTTTAAAAGTAAATAACTATTGCTAATGTATCTATGTGTTATATTGCAGCTACACCTGAATCCCGTACATGCAGTTGTGCAACTTCGACCATCATTTGAACACCTTAATTCTGGTGGCCCGAAAAGGAAAAATAATGTTAGAGCTGATTCAGATGTTAAGTCAGAAGAGCATGTGGATGTTAATTCTGCAGGTGCATCAAGGAAGCAGGTTATTTTCTATTTTTTCTATTCCATTCTAAAGTACTGCTGAAATATAGTGAATTTTATCTTGGGAAATCTGCCAAGTCGCTGATCGTGTTTATTTGGTAACTGTAAAGTATAATCATAATAACAATTATTGTTATTATTTTATAGGGAACACAATCATTTAATAGCTAGAAACCTCTGGGGCTATGCTGGTAGAGCTTTCCTTGGCTTTGTTGGATGGAAAGGAACAAAAGTTTTATTTGAAGAGAAGTTACTGATTTTATTTCTTTTTGTGGCAACTTTCAGCTATTAGCCTCTTGGTTGTGTCACACTTACAATCAATCCTTTTTAATTACTTTTGTTTAGGCTTTGTTTGATAACAATTTTATTTTCAGTTTTTGGAAACTAAGTATATTTCTAACACGACTTTCATCTTTCTGGACTAAAAGAGTTGAATTCTTAGCCAAATTTCGAAAATTATAACAATTTTTTAGAAACTATTGTTGGCTGTCAGAAGGGTATTTACCTTTACCCGGAAGACTTTTTTTTTCTTTTTTTGCAACTTACCTTATTCCTTTGAATGGTCTATTCTTAGTTTATTTATTTATTTATTTTATCATTAACTTACTGTCTACTGACCTTATCATTGTATTGCATTGGTTCACATCTGGGATTACATATTTTGTTCTGGTATTTATGGATTTTTGTATTGTTTCTATGGAACAGAAGAAGCAAACAGGACCTTCAACGGAAGTTAAAACTAGAGATGAGGAGGTAACACCATTGAAAATGAGTGCTCAATAGTGTAGGTTTAAGATTGTTTCTGAGAAAGTATTTTTTAGTGGGAGTTTCTTCCCCTGCACTTGTAGAAGAATTACTTATTAAGTGATGCTTCTAAAAGCAGCTTTAGTGCTTTCTAAGTGTTAGGTTTTTCAACATTTTTTTAAACTATGGAATGACATACCTTGAAAATTTTGAAATATGTTTTCAATGAACAAAAAAATGAGACATGATCCTACTAACTAATTAAGAGATCATGGGTTCATTCCATGGTGGCCACCTACCTCGAAATTAATTTCCTAGACACTCAAAGGTTGTAAGGTTAGGTGGGTTGTTCCGTATGATTAGTGAGATGCGTGTAAGCTGGTCCAAACACTTACGAATATTAAAAGAAAATTGACAAATGAAAACTATTACTCAAAGTACAAGGAAACATAACTCAAAGTACTTATCCTTGAGATAATGAAAAGAGACTATTTCTCAAAGTACAAGGGAACAAATGAAAACGTGTAGATTTAAACAATCAAAGACACGACTATCAACCTTAGGTATGATTGCCTTACTGTTAAATCCATCATTTTATAGTCGTCTAAAATTGTTTTGTTCACTTTTTCTCTCTAGTGCTGGATTCCACTCAAGTACTATGGCTTAGAGAGTGATCTATCAACCAGACATCTGCAAAGCATGGTGTCACAAACAGTTTCCCCTATGCAATTTTCAATGAGTCCGTATGTGTTTTTTGCTTGTTTATGTATTAAATCTTTAATACAGTAAATTTCATCTATCTGATAATTTTTCTTTTGAGTATTTGATTTGGTTCCTACTTATTTAAGGCACGACTATATGGACTCCTTGTGTCCTGGTACGAGTACAAGCGGCAACAAGCCCAAAGGTCCATCTAAAAAGTAAATACAATTACATATTCAGCTGTTTAATTTATGTTACCGAACATTTAAGTTGTCAGGCAACTGGTTGCAAGAAGTTGTCGGGGAGACTTCTAGTATTGATTAATGTTTTAATCCTACTTATGGGCATTTCAGGTATTTGCTTTCATTGTCTTTGGAGGAGCGGATTAAGAAATTGCTGACCGAGGTTTGTTTTAAATGAATACTTGTAAAAAAATTATTTCTGATGCATTTGCACATCTACTATAGCATCTAACTTCTATGCATTATTTGTTGGACGTATATTCCATCTTTTATGGTTTCATATTCATCAAACATTTTTTATTATCATTTAACTTACTGTCAAATTTAAGTTATTAGTATCTCTTTTTTAGTATTCGGGTCTTGAGAAAACTGTGACCTTATTACAAGAAAACTTTTAGTATATTGTGTGATCCTACTACATTTAGTTGTCAAGAAAACTTGTAGGATATTAAATCCTAGGTTGACTATAATTTGAACTTATTTTTTCTATGTTCTACTGTTTTCATTGTTCACAAAGACTACCAGACTGGTGGGTATTATCAGTATTGTTTTAGAAATAGATAATAACTTCTATTTTATTTATTTATTTATTTCTATAAGAAACAACTTTATTGATTGAATAAAATATCCCAAGATATCCGAAAATGGAAGGAAAAAAAAAGAAAGAAAAAGAGAAAAAAATATTAGAGGAACGAGAAAAAAGATTGGGAGGATGTCTTCGGAATGGCTTAAGTTTAATTTTTCTTCATGTTGCAAGCTTTTTTGTAATTATATTTCTTTTATTTTTTTTAGTTCTCATTGATGTTAAGTTTATGTGATATTTCATATGTTGTTTCTGCTGGGATATTAGCTACTGTAAATGTGAAACATGGAGTTGAATTGAGCACATTCCCATTTTTTTGCTTTTGGTAACTTTGGGAATTTGAAATTCCAGTTTCTTCCCTGGAATTTGTTTCCTTTTTCAAATTTTTAATCTATCAACAAAACGTTTCTTTCATTTAAAAGAAGAAAAAAACAGTCAAAATTATCTATAGCATTAGTTAGCTATACCAACACGGTGGATGGTTATGAACTATATGATGTTCATACCAGTGTTGGTGTCCTTATCTGTGTTTTTTAAGAAGGAAATGGTGCTGGCGTTTTATTAAAAAGTGTATTTACTGCTTCCCCTGACACGTCAGATTCAAGAATGATTCACATTAAAGGATCCATAGTTAAAAGAAAAATGGCTGGGCTTAGACAGGAGTTTGAAAATGAAGTACAACTACGGCTATCTGCTTTAGAAGCTGATCATATTTTCCATCAATTGGTCATATTTAAATATTGGTTCTTTTTGTTTCATATAAGTTTAAATAAAAAGTTGCGAACGCTTTTCACATTTGCTATTGGGAGATATTTTACCTCCTTCCCCGGTTAAGCAAAATATAGTTTGGAATTGAAGGAGGAAGTGGGAGATGCTAATGGCTTCACTAGGAAGTGCATTGCCTTTATATCATGCTGATTCATTGTTGATGACTTATTCCATGTTTCCATATTTGTTTTCTGAACAATCTTTTTCTTTCTTTTCAATAGGGACCTCCGGTTCAAAGATTTAGTGCACTTAAGCATTATGCTCCTGATTATGAAACAGAAGAGTTTATTGAGACTCTTCAGCAATATGCTCAGTTAGTGCAGGGTCTCTGGGTTCCAAAAAGTTTATTTCTAATTCCGCAAGATGGCAGTGGACGTTGTGCTAGGGATTTTGTTCTTTTTTTGTTTAGCAAGAATCCAGTGGTCAGCTCTTCGCAGATAAATGTTCCAAAGTCTCTTCGGGACAGAGTGAAACATTTTTTGAATTTATTTGGTGTTGAAAGACCTGCCTTTAAGGACTGGAAATTTAAGGAGAAAACAGACCGTTTATTTTTAAGCAACCACGTCAGAATTGCTGAGAAGCAAGAAGAGCTCTGGAACAACGTGGAAAAAGGGTTCACTTTCCTGAGATCTATAAAAAGTGTTCACCATGCAAATGCCGCCACAGGAAAGCCTGGCGTGGTTCCTAAACTTGAAAAACAAGTCAGTTCTGACCAGACTACAACTAAAAGCAGTAATGCACCTCTTAACCGCAAAGGTGCAATGTCGGATGAAACTCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTTTTTCAAAATCATAAGGTTTGCAGGTAGGGGCTCATTTTTTTCATTCTTGTGTGGTTATTCTACGAGATGTTTTTCTTGGTTGGGAAGGAATGCTACTGTGTTGAATAGTATGGAGAGGAGCTTTGATGAGATTTAGGATGTCATTGCCATTTAACCTTAACCTCTTTTTGCCGTGGGAACGCACTTTTAAATAAATGATAGCCTTCTTTTAGATTTGGAAACAATTATATCTCTCTGTACATTTTTACATGCACCGTATTGGTCCTTTGGGCTGCTTTGTTGAGGGGTTTTTTTCTTCTTATTTTTTTCTTTTCTATTTTAAGTTTGTCTTCGTATTTTGTAATAGCCTTAGAGTTGATTTATCATAGGGCATGGAAGTAATCTATTCCTGGTGGTATCATGGAGAAGATGAATCTTCTATTAACAAGGCTGATGTGGTTGCCTTATTATTGTAGCTTTCAGTTGATATGTCAAGGTTTGCGTGACTTGGCTGTGTCCCAGTCTACTCTTCCGAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGATGAATTAAAAAAAATCATAAGCCAAGTCGCTACTGAGATTCATGGTCTCTATGTCTTGACCTCATCTCCAGAGCATCCAGAATATGATCCATTGAGGTTGTTGACTTTTATTCATGTTTAAGTGTCTTTATGTGAAAATTGTTTGCATTATTTTTCCATGCTTGTATCAATGTTGAAAAATATTTGAAATTTCACTTGTGCCTGAGAATTTGGCGTCTTTGTTCTTTACCTTATGTGGCATGCTGCTCTATGCAGGAAAGTTGTCATTCAACTTTTACGTGGACGAGGACCTAAAGCAGTGCTTAAAAAAGCTGATGTTTTGGAAGCTTCAAAGCATGAACTTGGTAGAGCTATCAATAGCAATGAATATAGCAAGGTTAGCCAATATTTTATTTGAGCTTACCCGCTTGAAAAAGGGAAATTTGTAATCGATTATTTTCCTTTGAAAAAGGAAAATTTTCAAGCAGGAAGGGATTGGGTTGTGCGATCAAATTACAAATTTCCGTAAATGTTATCAGCCTCCTTAACTGGTGTTACGATATCTGAGTGTTGTCTTGCCCTGTTGCATTCTCGCAGGTTATGAATGAAATTTGCATATCCCACGGTTCTTCTTGGACCTTGAAGAGTGGTGATGGAAATTCAAGATGATTAGGTTCTTGGAACATCATTCCGAGCACAATTAAAGAGGAGGTTCAAAGAAAAGCAAGCAACCAGATCTTCTCACTCTGTTGTACAACTTTCTACTCTTGAAAGTGTATCAAATTACACAAAGCATCTCTTCATCTTAAGAAGGGGTGAGAGAGAGAGGAAAAAAAAACCTTTTTTTTCTCATTTTAGCTCTGATTGATAAACAAAGCATTTTACAGATAAATGGAATGTGATTTCCAGTGGCCTCCCACAGCTAAATTTTGACTTCATGTATTACTCTACTGTCTTTTATCATCAGGTACCATATTCCAGCGCAGGGAAGCTTAGTGGAAAATGCTTTGGCAGACGCAACACTCTTTAATATCATTTTGCAAAATACAAATTTTGAAATGTACAGACAGGTAAATATTAGCCCTCTTATATTAGGCAATTTTATCCTTGCTATGTCAATAAGATGCAGCAAGAAACAGTGTAATGCTACAGTGCACAATTTTGGCAATGAACCAAGATCTTCGG

mRNA sequence

CGAAAATAAACCTAAAAAAAGAGCATACAGAAAATTTATGGGTGCGGCGGTCTAAGTTATCTCTCCGCCGGAGCAGTTGGTGGTTGCGGAAAGAAAAAACTTCGATTGCATATTCTCTAGTGTCCGATAAGCTTTTCGCTGCTGATTCACCAAGAGGAAGGAGCACGTCAAAAACCTTTCAGGATGGACCTGGACGGCCTAGACGAAGGGAGCCAGGTACCATCACGGACCTCCAGATTCGCACCCAAGTCCTCTAAATTCAAGCCGAAACCAAAATCGGAAGTAGTTCCGAAACCGGAGCCCCAACAGCCGCTAACGAAGTTGGAACCTCAACCTCCCATTTCTAAGCCGGAAGTTGTAGAGCCTGATGCTCGAGTTGAGGAGAAGAAGGAAGACGGTGAAGAAGTAGAAGTAAAACCTAAAGTTGAATCCTCACTTCCTAATGGAGTTGCTAAAATGGACGTTGAAACTAAGTCGGAAGTTGAAGAGGATGCAATGGTGGATGATGATCCAATTGAAGAGGATGCTTCTGAAGATATGGTTGTTCGTGAAATCGACGTTCTATTTACTCCTTCAGTTGATAGCAATTCGAAATTATATGTGTTGCAATATCCTCTTAGACCACGCTGGAGGCCCTATGAATTCGAGGGGCGATGTGACGAGGTAAGAGTTAAACCTAGCACTGGAGAAGTGGAAGTCGACCTGAATGTTGATATTGAATCCAATAACTATGACAACAAAGCTGATGGCACATTCCAAATGAAGAAGCAGACTTTGACATCTTCATGGCAACCGCCTCTAGCTACGTCCTATGCTGTTGGTCTGCTTATGGGCAATAAGCTACACCTGAATCCCGTACATGCAGTTGTGCAACTTCGACCATCATTTGAACACCTTAATTCTGGTGGCCCGAAAAGGAAAAATAATGTTAGAGCTGATTCAGATGTTAAGTCAGAAGAGCATGTGGATGTTAATTCTGCAGGTGCATCAAGGAAGCAGAAGAAGCAAACAGGACCTTCAACGGAAGTTAAAACTAGAGATGAGGAGTGCTGGATTCCACTCAAGTACTATGGCTTAGAGAGTGATCTATCAACCAGACATCTGCAAAGCATGGTGTCACAAACAGTTTCCCCTATGCAATTTTCAATGAGTCCGCACGACTATATGGACTCCTTGTGTCCTGGTACGAGTACAAGCGGCAACAAGCCCAAAGGTCCATCTAAAAAGTATTTGCTTTCATTGTCTTTGGAGGAGCGGATTAAGAAATTGCTGACCGAGGGACCTCCGGTTCAAAGATTTAGTGCACTTAAGCATTATGCTCCTGATTATGAAACAGAAGAGTTTATTGAGACTCTTCAGCAATATGCTCAGTTAGTGCAGGGTCTCTGGGTTCCAAAAAGTTTATTTCTAATTCCGCAAGATGGCAGTGGACGTTGTGCTAGGGATTTTGTTCTTTTTTTGTTTAGCAAGAATCCAGTGGTCAGCTCTTCGCAGATAAATGTTCCAAAGTCTCTTCGGGACAGAGTGAAACATTTTTTGAATTTATTTGGTGTTGAAAGACCTGCCTTTAAGGACTGGAAATTTAAGGAGAAAACAGACCGTTTATTTTTAAGCAACCACGTCAGAATTGCTGAGAAGCAAGAAGAGCTCTGGAACAACGTGGAAAAAGGGTTCACTTTCCTGAGATCTATAAAAAGTGTTCACCATGCAAATGCCGCCACAGGAAAGCCTGGCGTGGTTCCTAAACTTGAAAAACAAGTCAGTTCTGACCAGACTACAACTAAAAGCAGTAATGCACCTCTTAACCGCAAAGGTGCAATGTCGGATGAAACTCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTTTTTCAAAATCATAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGACTTGGCTGTGTCCCAGTCTACTCTTCCGAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGATGAATTAAAAAAAATCATAAGCCAAGTCGCTACTGAGATTCATGGTCTCTATGTCTTGACCTCATCTCCAGAGCATCCAGAATATGATCCATTGAGGAAAGTTGTCATTCAACTTTTACGTGGACGAGGACCTAAAGCAGTGCTTAAAAAAGCTGATGTTTTGGAAGCTTCAAAGCATGAACTTGGTAGAGCTATCAATAGCAATGAATATAGCAAGGTTATGAATGAAATTTGCATATCCCACGGTTCTTCTTGGACCTTGAAGAGTGGTGATGGAAATTCAAGATGATTAGGTTCTTGGAACATCATTCCGAGCACAATTAAAGAGGAGGTTCAAAGAAAAGCAAGCAACCAGATCTTCTCACTCTGTTGTACAACTTTCTACTCTTGAAAGTGTATCAAATTACACAAAGCATCTCTTCATCTTAAGAAGGGGTGAGAGAGAGAGGAAAAAAAAACCTTTTTTTTCTCATTTTAGCTCTGATTGATAAACAAAGCATTTTACAGATAAATGGAATGTGATTTCCAGTGGCCTCCCACAGCTAAATTTTGACTTCATGTATTACTCTACTGTCTTTTATCATCAGGTACCATATTCCAGCGCAGGGAAGCTTAGTGGAAAATGCTTTGGCAGACGCAACACTCTTTAATATCATTTTGCAAAATACAAATTTTGAAATGTACAGACAGGTAAATATTAGCCCTCTTATATTAGGCAATTTTATCCTTGCTATGTCAATAAGATGCAGCAAGAAACAGTGTAATGCTACAGTGCACAATTTTGGCAATGAACCAAGATCTTCGG

Coding sequence (CDS)

ATGGACCTGGACGGCCTAGACGAAGGGAGCCAGGTACCATCACGGACCTCCAGATTCGCACCCAAGTCCTCTAAATTCAAGCCGAAACCAAAATCGGAAGTAGTTCCGAAACCGGAGCCCCAACAGCCGCTAACGAAGTTGGAACCTCAACCTCCCATTTCTAAGCCGGAAGTTGTAGAGCCTGATGCTCGAGTTGAGGAGAAGAAGGAAGACGGTGAAGAAGTAGAAGTAAAACCTAAAGTTGAATCCTCACTTCCTAATGGAGTTGCTAAAATGGACGTTGAAACTAAGTCGGAAGTTGAAGAGGATGCAATGGTGGATGATGATCCAATTGAAGAGGATGCTTCTGAAGATATGGTTGTTCGTGAAATCGACGTTCTATTTACTCCTTCAGTTGATAGCAATTCGAAATTATATGTGTTGCAATATCCTCTTAGACCACGCTGGAGGCCCTATGAATTCGAGGGGCGATGTGACGAGGTAAGAGTTAAACCTAGCACTGGAGAAGTGGAAGTCGACCTGAATGTTGATATTGAATCCAATAACTATGACAACAAAGCTGATGGCACATTCCAAATGAAGAAGCAGACTTTGACATCTTCATGGCAACCGCCTCTAGCTACGTCCTATGCTGTTGGTCTGCTTATGGGCAATAAGCTACACCTGAATCCCGTACATGCAGTTGTGCAACTTCGACCATCATTTGAACACCTTAATTCTGGTGGCCCGAAAAGGAAAAATAATGTTAGAGCTGATTCAGATGTTAAGTCAGAAGAGCATGTGGATGTTAATTCTGCAGGTGCATCAAGGAAGCAGAAGAAGCAAACAGGACCTTCAACGGAAGTTAAAACTAGAGATGAGGAGTGCTGGATTCCACTCAAGTACTATGGCTTAGAGAGTGATCTATCAACCAGACATCTGCAAAGCATGGTGTCACAAACAGTTTCCCCTATGCAATTTTCAATGAGTCCGCACGACTATATGGACTCCTTGTGTCCTGGTACGAGTACAAGCGGCAACAAGCCCAAAGGTCCATCTAAAAAGTATTTGCTTTCATTGTCTTTGGAGGAGCGGATTAAGAAATTGCTGACCGAGGGACCTCCGGTTCAAAGATTTAGTGCACTTAAGCATTATGCTCCTGATTATGAAACAGAAGAGTTTATTGAGACTCTTCAGCAATATGCTCAGTTAGTGCAGGGTCTCTGGGTTCCAAAAAGTTTATTTCTAATTCCGCAAGATGGCAGTGGACGTTGTGCTAGGGATTTTGTTCTTTTTTTGTTTAGCAAGAATCCAGTGGTCAGCTCTTCGCAGATAAATGTTCCAAAGTCTCTTCGGGACAGAGTGAAACATTTTTTGAATTTATTTGGTGTTGAAAGACCTGCCTTTAAGGACTGGAAATTTAAGGAGAAAACAGACCGTTTATTTTTAAGCAACCACGTCAGAATTGCTGAGAAGCAAGAAGAGCTCTGGAACAACGTGGAAAAAGGGTTCACTTTCCTGAGATCTATAAAAAGTGTTCACCATGCAAATGCCGCCACAGGAAAGCCTGGCGTGGTTCCTAAACTTGAAAAACAAGTCAGTTCTGACCAGACTACAACTAAAAGCAGTAATGCACCTCTTAACCGCAAAGGTGCAATGTCGGATGAAACTCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTTTTTCAAAATCATAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGACTTGGCTGTGTCCCAGTCTACTCTTCCGAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGATGAATTAAAAAAAATCATAAGCCAAGTCGCTACTGAGATTCATGGTCTCTATGTCTTGACCTCATCTCCAGAGCATCCAGAATATGATCCATTGAGGAAAGTTGTCATTCAACTTTTACGTGGACGAGGACCTAAAGCAGTGCTTAAAAAAGCTGATGTTTTGGAAGCTTCAAAGCATGAACTTGGTAGAGCTATCAATAGCAATGAATATAGCAAGGTTATGAATGAAATTTGCATATCCCACGGTTCTTCTTGGACCTTGAAGAGTGGTGATGGAAATTCAAGATGA

Protein sequence

MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVEPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR*

Homology

[Close]

BLAST of CsGy4G004950 vs. ExPASy Swiss-Prot
Match: Q9CZT4 (DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-30
Identity = 133/477 (27.88%), Postives = 208/477 (43.61%), Query Frame = 0


Query: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
           +D V++EIDV    S+    KLY+ QYP+RP    Y+        ++KP   +VE+++ +
Sbjct: 6   DDPVIQEIDVYLAKSL--AEKLYLFQYPVRPASMTYDDIPHL-SAKIKPKQQKVELEMAI 65

Query: 177 DIESNNYDNK-------------ADGTFQ-----MKKQTLTSSWQPPLATSYAVGLLMGN 236
           D  + NY                AD T       M KQT  SS        YA  L    
Sbjct: 66  DTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTARYAAALYRQG 125

Query: 237 KLHLNPVHAVVQLRPSFEHLNSGGPKRK-----NNVRADSDVKSEEHVDVNSAGASRKQK 296
           +LHL P+H ++QLRPSF +L+    K +     N     S  ++EE V   +   SR + 
Sbjct: 126 ELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEEDVKQITVRFSRPES 185

Query: 297 KQTG----PSTEV--KTRDEECWIPLKYYGLESDLSTRHLQSMV---SQTVSPMQFSMSP 356
           +Q       S E   K   EE W+ L YYG+    S    Q ++   S  V   +   SP
Sbjct: 186 EQARQRRVQSYEFLQKKHAEEPWVHLHYYGMRDSRSEHERQYLLCQGSSGVENTELVKSP 245

Query: 357 HDYMDSLC-PGTSTSGNKPKGPSK----KYLLSLSLEERIKKLLTEGPPVQRFSALKHYA 416
            +Y+  L  P      +KP  PS       L +L L ++IK L+     +   + +    
Sbjct: 246 SEYLMMLMPPSPEEEKDKPVAPSNVLSMAQLRTLPLADQIKVLMKNVKVMPFANLMSLLG 305

Query: 417 PDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSG---------RC-ARDFVLFLFSK 476
           P  ++   +  +Q+ A LVQG WV KS  L P+D S           C  RDFV++ F++
Sbjct: 306 PSVDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGMPAEVLCRGRDFVMWKFTQ 365

Query: 477 NP-VVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEE 536
           +  VV      V K   + VK FL    V R   K W+F    D  F+  H  + ++Q  
Sbjct: 366 SRWVVRKEVAAVTKLCAEDVKDFLEHMAVVR-INKGWEFLLPYDLEFIKKHPDVVQRQHM 425

Query: 537 LWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKL--EKQVSSDQTTTKSSNAPLNRK 544
           LW+ ++     + ++          G+   V  +  E++V + +T  + ++A L R+
Sbjct: 426 LWSGIQAKLEKVYNLVKETMPKKPDGQSAPVGLVSGEQRVQTAKTKAQQNHAFLERE 478

[Close]

BLAST of CsGy4G004950 vs. ExPASy Swiss-Prot
Match: Q9NVU0 (DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.9e-30
Identity = 136/479 (28.39%), Postives = 211/479 (44.05%), Query Frame = 0


Query: 117 EDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNV 176
           +D VV+EIDV    S+    KLY+ QYP+RP    Y+        ++KP   +VE+++ +
Sbjct: 6   DDPVVQEIDVYLAKSL--AEKLYLFQYPVRPASMTYDDIPHL-SAKIKPKQQKVELEMAI 65

Query: 177 DIESNNYDNK-------------ADGTFQ-----MKKQTLTSSWQPPLATSYAVGLLMGN 236
           D  + NY                AD T       M KQT  SS      + YA  L    
Sbjct: 66  DTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQG 125

Query: 237 KLHLNPVHAVVQLRPSFEHLNSGGPKRK-----NNVRADSDVKSEEHVDVNSAGASRKQK 296
           +LHL P+H ++QLRPSF +L+    K +     N     S  ++E+ V   +   SR + 
Sbjct: 126 ELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPES 185

Query: 297 KQTG----PSTEV--KTRDEECWIPLKYYGLESDLSTRHLQSMV---SQTVSPMQFSMSP 356
           +Q       S E   K   EE W+ L YYGL    S    Q ++   S  V   +   SP
Sbjct: 186 EQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSP 245

Query: 357 HDYMDSLC-PGTSTSGNKPKGPSK----KYLLSLSLEERIKKLLTEGPPVQRFSALKHYA 416
            +Y+  L  P      +KP  PS       L +L L ++IK L+     +   + +    
Sbjct: 246 SEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLG 305

Query: 417 PDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSG---------RC-ARDFVLFLFSK 476
           P  ++   +  +Q+ A LVQG WV KS  L P+D S           C  RDFV++ F++
Sbjct: 306 PSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQ 365

Query: 477 NP-VVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEE 536
           +  VV      V K   + VK FL    V R   K W+F    D  F+  H  + ++Q  
Sbjct: 366 SRWVVRKEVATVTKLCAEDVKDFLEHMAVVR-INKGWEFILPYDGEFIKKHPDVVQRQHM 425

Query: 537 LWNNV----EKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPLNRK 544
           LW  +    EK +  ++        +A +G  G+V   ++++   +T  + ++A L R+
Sbjct: 426 LWTGIQAKLEKVYNLVKETMP-KKPDAQSGPAGLVCG-DQRIQVAKTKAQQNHALLERE 478

[Close]

BLAST of CsGy4G004950 vs. ExPASy Swiss-Prot
Match: O74883 (DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc37 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-11
Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 0


Query: 96  TKSEVEEDAMVDDDPIEEDASEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPY-EF 155
           ++ +  E+A + +D  EE   +D VVR   V F+P + +N  L + Q+PLRP+ R Y + 
Sbjct: 4   SEDQAMEEAKLRNDETEE---QDPVVRTYPVFFSPGLRNN--LLLNQFPLRPKNRTYSDA 63

Query: 156 EGRCD-EVRVKPSTGEVEVDLNVDIESNNYDNKA----DGTFQMKKQTLTSSWQPPLATS 215
            G    +VRVKP TG +EVD+ +       ++KA    +G   ++ QTL+   Q P  T+
Sbjct: 64  NGEAPIDVRVKPKTGWMEVDVPIPTTKYYNEDKAMKYGNGKKPIQTQTLSGRLQKP-RTN 123

Query: 216 YAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRK-----NNVRADSDVKSEEHVDVN 275
             VGL+   + H+ P+  + QLRPS +H+N    K K     +N  + +         V 
Sbjct: 124 LMVGLIRDGQFHIVPLRGLTQLRPSMKHVNEYTQKLKAAAGPSNSSSGTSTPRGPIRAVQ 183

Query: 276 SAGASRKQKKQTGPSTEVKTRDEECWIPL 294
                  +  +   +  V+  +EE W+ L
Sbjct: 184 VTAKQNTEAPKVSTTHIVRATEEEEWVEL 206

[Close]

BLAST of CsGy4G004950 vs. NCBI nr
Match: XP_004149158.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis sativus] >KGN53263.1 hypothetical protein Csa_015177 [Cucumis sativus])

HSP 1 Score: 1381 bits (3575), Expect = 0.0
Identity = 702/702 (100.00%), Postives = 702/702 (100.00%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE
Sbjct: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV
Sbjct: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL
Sbjct: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR
Sbjct: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702

[Close]

BLAST of CsGy4G004950 vs. NCBI nr
Match: XP_008453719.1 (PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo])

HSP 1 Score: 1305 bits (3377), Expect = 0.0
Identity = 661/702 (94.16%), Postives = 677/702 (96.44%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDE SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQP TKLEPQPP+SKPEVVE
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDA++ EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEED MVDDDP+EEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KAD TFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNN+RADSDVKSEEHVDVNSAGASRKQKKQTGPSTE+KTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTS NKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEF+E LQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTD  FLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           +I +KQEE WN +EK   FLRS+KS  H  A TGKP VVPK EKQVS D+TTTKSSNAPL
Sbjct: 481 KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASK ELGRAINSNEYSKVMNEIC+SHGSSWTLKSGDGNSR
Sbjct: 661 LEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 702

[Close]

BLAST of CsGy4G004950 vs. NCBI nr
Match: KAA0044763.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1283 bits (3320), Expect = 0.0
Identity = 653/702 (93.02%), Postives = 669/702 (95.30%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDE SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQP TKLEPQPP+SKPEVVE
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPTTKLEPQPPVSKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDA++ EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEED MVDDDP+EEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KAD TFQMKKQTLTSSWQPPLATSYA        LHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQTLTSSWQPPLATSYA--------LHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNN+RADSDVKSEEHVDVNSAGASRKQKKQTGPSTE+KTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTS NKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEF+E LQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTD  FLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           +I +KQEE WN +EK   FLRS+KS  H  A TGKP VVPK EKQVS D+TTTKSSNAPL
Sbjct: 481 KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASK ELGRAINSNEYSKVMNEIC+SHGSSWTLKSGDGNSR
Sbjct: 661 LEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 694

[Close]

BLAST of CsGy4G004950 vs. NCBI nr
Match: TYK16700.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1246 bits (3223), Expect = 0.0
Identity = 638/702 (90.88%), Postives = 654/702 (93.16%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDE SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQP TKLEPQPP+SKPEVVE
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDA++ EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEED MVDDDP+EEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KAD TFQMKKQ                       LHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQ-----------------------LHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNN+RADSDVKSEEHVDVNSAGASRKQKKQTGPSTE+KTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTS NKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEF+E LQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTD  FLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           +I +KQEE WN +EK   FLRS+KS  H  A TGKP VVPK EKQVS D+TTTKSSNAPL
Sbjct: 481 KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASK ELGRAINSNEYSKVMNEIC+SHGSSWTLKSGDGNSR
Sbjct: 661 LEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 679

[Close]

BLAST of CsGy4G004950 vs. NCBI nr
Match: XP_038876785.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida])

HSP 1 Score: 1222 bits (3162), Expect = 0.0
Identity = 623/704 (88.49%), Postives = 655/704 (93.04%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLD LDE SQV SRTSRFAPK+SKFKPKPKSEVVPKPEPQQP TK EPQPP+SKPEV E
Sbjct: 1   MDLDDLDEQSQVRSRTSRFAPKASKFKPKPKSEVVPKPEPQQPPTKSEPQPPVSKPEVTE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDAR+ EKKE+GEEVE+KPKVE SLPNGVAKMDVETKSEVEE+ MVDDDP+EEDASEDMV
Sbjct: 61  PDARIGEKKEEGEEVEIKPKVEPSLPNGVAKMDVETKSEVEEETMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPS D N+KLYVLQYPLRPRWRPYEFEGRCDEVRVKPS+GEVEVDLNVDIES
Sbjct: 121 VREIDVLFTPSPDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSSGEVEVDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KADG+ QMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADGSLQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKN+VRAD DVKSEEHVDVNSAGASRKQKKQTGPSTE+KT DEECWIPLKYYG ES
Sbjct: 241 GGPKRKNSVRADPDVKSEEHVDVNSAGASRKQKKQTGPSTELKTGDEECWIPLKYYGQES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHL+SMV+QT +PMQFSMSP DYMDSLCPGTSTS NKPKGPSK+YLLSLSLEERIK
Sbjct: 301 DLSTRHLRSMVAQTAAPMQFSMSPLDYMDSLCPGTSTSSNKPKGPSKRYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEFIE LQQYAQ VQGLWVPKS  L+PQD SGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQSVQGLWVPKSSVLLPQDASGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVL LFSKNPVVSSSQINVPKSLR++VKHFLNLFGVERPAFKDWKFKEKTD LFLSN+V
Sbjct: 421 DFVLNLFSKNPVVSSSQINVPKSLREKVKHFLNLFGVERPAFKDWKFKEKTDHLFLSNYV 480

Query: 481 RIAEKQEELWNNVEKGFT--FLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNA 540
            + +KQE++W +VE+G +  F  S KSV HANAATGKP +V K EKQVS+D+ T KSSNA
Sbjct: 481 DLVQKQEKIWRSVEEGISKIFHGSGKSVSHANAATGKPDMVSKPEKQVSNDKATIKSSNA 540

Query: 541 PLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600
            LNRK  MSDETREALPKALQKLF NHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA
Sbjct: 541 ALNRKSTMSDETREALPKALQKLFHNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAA 600

Query: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKA 660
           AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKA
Sbjct: 601 AYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKA 660

Query: 661 DVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           DVLEASK ELGR I SNEYSKVMNEIC+SHGSSW LKSGDGNSR
Sbjct: 661 DVLEASKRELGRGITSNEYSKVMNEICVSHGSSWALKSGDGNSR 704

[Close]

BLAST of CsGy4G004950 vs. ExPASy TrEMBL
Match: A0A0A0KUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038800 PE=4 SV=1)

HSP 1 Score: 1381 bits (3575), Expect = 0.0
Identity = 702/702 (100.00%), Postives = 702/702 (100.00%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE
Sbjct: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV
Sbjct: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL
Sbjct: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR
Sbjct: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702

[Close]

BLAST of CsGy4G004950 vs. ExPASy TrEMBL
Match: A0A1S3BX09 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494365 PE=4 SV=1)

HSP 1 Score: 1305 bits (3377), Expect = 0.0
Identity = 661/702 (94.16%), Postives = 677/702 (96.44%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDE SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQP TKLEPQPP+SKPEVVE
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDA++ EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEED MVDDDP+EEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KAD TFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNN+RADSDVKSEEHVDVNSAGASRKQKKQTGPSTE+KTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTS NKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEF+E LQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTD  FLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           +I +KQEE WN +EK   FLRS+KS  H  A TGKP VVPK EKQVS D+TTTKSSNAPL
Sbjct: 481 KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASK ELGRAINSNEYSKVMNEIC+SHGSSWTLKSGDGNSR
Sbjct: 661 LEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 702

[Close]

BLAST of CsGy4G004950 vs. ExPASy TrEMBL
Match: A0A5A7TMP0 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00520 PE=4 SV=1)

HSP 1 Score: 1283 bits (3320), Expect = 0.0
Identity = 653/702 (93.02%), Postives = 669/702 (95.30%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDE SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQP TKLEPQPP+SKPEVVE
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPTTKLEPQPPVSKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDA++ EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEED MVDDDP+EEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KAD TFQMKKQTLTSSWQPPLATSYA        LHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQTLTSSWQPPLATSYA--------LHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNN+RADSDVKSEEHVDVNSAGASRKQKKQTGPSTE+KTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTS NKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEF+E LQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTD  FLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           +I +KQEE WN +EK   FLRS+KS  H  A TGKP VVPK EKQVS D+TTTKSSNAPL
Sbjct: 481 KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASK ELGRAINSNEYSKVMNEIC+SHGSSWTLKSGDGNSR
Sbjct: 661 LEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 694

[Close]

BLAST of CsGy4G004950 vs. ExPASy TrEMBL
Match: A0A5D3CZA9 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005330 PE=4 SV=1)

HSP 1 Score: 1246 bits (3223), Expect = 0.0
Identity = 638/702 (90.88%), Postives = 654/702 (93.16%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLDGLDE SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQP TKLEPQPP+SKPEVVE
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSKPEVVE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASEDMV 120
           PDA++ EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEED MVDDDP+EEDASEDMV
Sbjct: 61  PDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMV 120

Query: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIES 180
           VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVE+DLNVDIES
Sbjct: 121 VREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIES 180

Query: 181 NNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNS 240
           NNYD+KAD TFQMKKQ                       LHLNPVHAVVQLRPSFEHLNS
Sbjct: 181 NNYDSKADDTFQMKKQ-----------------------LHLNPVHAVVQLRPSFEHLNS 240

Query: 241 GGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGLES 300
           GGPKRKNN+RADSDVKSEEHVDVNSAGASRKQKKQTGPSTE+KTRDEECWIPLKYYGLES
Sbjct: 241 GGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLES 300

Query: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEERIK 360
           DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTS NKPKGPSKKYLLSLSLEERIK
Sbjct: 301 DLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIK 360

Query: 361 KLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420
           KLLTEGPPVQRFSALKHYAPDYE EEF+E LQQYAQLVQGLWVPKSLFLIPQDGSGRCAR
Sbjct: 361 KLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRCAR 420

Query: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSNHV 480
           DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTD  FLSNHV
Sbjct: 421 DFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHV 480

Query: 481 RIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSSNAPL 540
           +I +KQEE WN +EK   FLRS+KS  H  A TGKP VVPK EKQVS D+TTTKSSNAPL
Sbjct: 481 KIVQKQEEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPL 540

Query: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600
           NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY
Sbjct: 541 NRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAY 600

Query: 601 GVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660
           GVDAPP+ELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV
Sbjct: 601 GVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADV 660

Query: 661 LEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           LEASK ELGRAINSNEYSKVMNEIC+SHGSSWTLKSGDGNSR
Sbjct: 661 LEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 679

[Close]

BLAST of CsGy4G004950 vs. ExPASy TrEMBL
Match: A0A6J1JCH8 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483153 PE=4 SV=1)

HSP 1 Score: 1186 bits (3069), Expect = 0.0
Identity = 604/706 (85.55%), Postives = 647/706 (91.64%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVE 60
           MDLD LDE SQVPSRTSRFAPK+SKFKPKPK+EVVPKPEPQQP TKLEP+ P+ +PEV E
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKTEVVPKPEPQQPPTKLEPETPVPEPEVAE 60

Query: 61  PDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDD--PIEEDASED 120
           PDA + EKKE+GEEVEVKPKVE+SLPNGV KMDVETK EVEE+ MVDDD  P+EEDASED
Sbjct: 61  PDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVDDDDDPMEEDASED 120

Query: 121 MVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDI 180
           MVVREIDVLFTPS+D N+KLYVLQYPLRPRWRPYEFEGRCDEVRVKP+TGEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSLDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVDI 180

Query: 181 ESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHL 240
           ESNNYD+KAD   QMKKQTL SSWQPP+ATSYAVGLLMG+KLHLNPVH VVQLRPSFEHL
Sbjct: 181 ESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEHL 240

Query: 241 NSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGL 300
           NSGGPKRK NVRAD +VKSEEH DVNSAG SRKQKKQTGPSTE KT DEECWIPLKYYGL
Sbjct: 241 NSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEECWIPLKYYGL 300

Query: 301 ESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEER 360
           ESDLSTRHL+SMV+Q  SPMQFSMSPHDY+DSLCPG S+S NKPKGPSK++LLSLSLEER
Sbjct: 301 ESDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEER 360

Query: 361 IKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRC 420
           IKKLLTEGPP+QRFSALKHYAPDYE +EFIE LQQYAQ VQGLWV KS FL+PQDGSGRC
Sbjct: 361 IKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGRC 420

Query: 421 ARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSN 480
           ARDFVL LFSKNPVVSSSQINVPKSLRD+VKHFLN FGVERPAFKDW+FKEKTDRLFL+N
Sbjct: 421 ARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLNN 480

Query: 481 HVRIAEKQEELWNNVEKGFT--FLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSS 540
           +V I +KQE++W +VE+G T  F  S+K++ HANAA  KP +VPK EKQV  D+ +TKSS
Sbjct: 481 YVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKSS 540

Query: 541 NAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           NA LNRK  MSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 NAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660
           AAAYGVDAPPDELK+II QVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK
Sbjct: 601 AAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702
           KADVLEASK ELGRAINSNEYSKVMNEIC+SHGSSW LKSGDGNSR
Sbjct: 661 KADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 706

[Close]

BLAST of CsGy4G004950 vs. TAIR 10
Match: AT5G49530.1 (SIN-like family protein )

HSP 1 Score: 510.8 bits (1314), Expect = 1.8e-144
Identity = 310/728 (42.58%), Postives = 431/728 (59.20%), Query Frame = 0


Query: 1   MDLDGLDEGSQVPSRTSRFAP-KSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVV 60
           MD D  D+  +V ++T RFAP ++ K KPKPK                 P+P   KP   
Sbjct: 1   MDFDDDDKPKEV-TKTRRFAPGRAGKSKPKPK-----------------PEPTADKPVQP 60

Query: 61  EPDARVEEKKEDGEEVEVK---PKVESSLPNGVAKMDVETKSEVEEDAM----------- 120
            P ++ E   +   +V+ K    KVE+ + NG  KM++++K + E + M           
Sbjct: 61  PPQSQTESVSKTEHDVDAKFVGTKVETEVCNGSVKMEIDSKVDKEPEIMETELMEEDQQL 120

Query: 121 -VDDDPIEEDASEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVK 180
            + ++  EE+  +D+VVREIDV F PS+D+N++LYVLQYPLRP WRPYE + RC+EVRV 
Sbjct: 121 PLQEEKEEEEEEDDVVVREIDVFFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVN 180

Query: 181 PSTGEVEVDLNVDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNP 240
           PST +VE+DL++D+ S NYD+       M KQTL ++W+ P    YAVG+L G+KLHLNP
Sbjct: 181 PSTSQVEIDLSMDVHSKNYDSNFG--LNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNP 240

Query: 241 VHAVVQLRPSFEHLNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQT-GPSTEVK 300
           VHAV QLRPS + L+S           D   K EE  +  S G S+KQ K     ST+ K
Sbjct: 241 VHAVAQLRPSMQSLSS-----------DKKKKQEESTE-ESVGTSKKQNKGVQQASTDQK 300

Query: 301 TRDEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPK 360
             +EE W+ LKY+GL+S+  +R+L  M++   S + F+MSP  Y++ LC G S+  ++ K
Sbjct: 301 PINEETWVSLKYHGLQSEYCSRYLNGMMANGNSSIDFNMSPGTYINELCRGGSSRNSESK 360

Query: 361 GPSKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWV 420
              K+ LLSL L+ER++KLL EG P+ R+S LKHYAP++  E+F+  LQ+Y +LVQGLW 
Sbjct: 361 ETLKRVLLSLPLKERVQKLLCEGSPLIRYSVLKHYAPEFSDEDFLGALQEYGRLVQGLWT 420

Query: 421 PKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVP-KSLRDRVKHFLNLFGVERPAF 480
           PK+  L+  DG    ARD+VL LFS+N  +  S++      ++  ++  L  F  ER   
Sbjct: 421 PKTR-LLKLDGPVEAARDYVLSLFSQNTTIKYSEVEATGDKMKPLMERMLTEFAKERHVL 480

Query: 481 KDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKL 540
           KDWKFKE TD  F+ ++  I ++Q+  W +  +      ++KS      A G      K 
Sbjct: 481 KDWKFKEPTDVSFIKSYPEIVKEQDIFWTDKRE------NLKS---RITAQGGKSRADKR 540

Query: 541 EKQVSSDQTTTKSSNAP--LNRKGA-------------MSDETREALPKALQKLFQNHKV 600
              V +  + T     P  L+ KG              M +E ++ALPKAL+K+FQ HKV
Sbjct: 541 RNVVGTSSSVTVKPEVPTTLSDKGGSSKNTIHRVVTQEMPEELKKALPKALKKVFQTHKV 600

Query: 601 CSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLT 660
           C ++ ICQGLRDLAVS S  PKAD+ MAV  A  VDA   EL+ +I+ VAT IHG YV  
Sbjct: 601 CRYETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQGELEDVINGVATNIHGSYVSI 660

Query: 661 SSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICIS 696
           SSP+HPEYD LR+VVI LL G  P   L KA+V  A + +L R I +NEY KVM+EIC +
Sbjct: 661 SSPDHPEYDSLREVVISLLTGSPPGTKLMKAEVFAAGRTKLEREITNNEYIKVMHEICET 686

The following BLAST results are available for this feature:

BLAST of CsGy4G004950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CZT4	2.2e-30	27.88	DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e ...	[more]
Q9NVU0	2.9e-30	28.39	DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E P...	[more]
O74883	6.7e-11	29.67	DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of CsGy4G004950 vs. NCBI nr


Match Name	Identity	Description
XP_004149158.1	100.00	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis sativus] >KGN53...	[more]
XP_008453719.1	94.16	PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo...	[more]
KAA0044763.1	93.02	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo var. makuw...	[more]
TYK16700.1	90.88	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucumis melo var. makuw...	[more]
XP_038876785.1	88.49	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida]	[more]

BLAST of CsGy4G004950 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KUN5	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038800 PE=4 SV=1	[more]
A0A1S3BX09	94.16	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A5A7TMP0	93.02	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo var. mak...	[more]
A0A5D3CZA9	90.88	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo var. mak...	[more]
A0A6J1JCH8	85.55	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita maxima OX=3...	[more]

BLAST of CsGy4G004950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49530.1	1.8e-144	42.58	SIN-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006886	DNA-directed RNA polymerase III subunit Rpc5	PFAM	PF04801	Sin_N	coord: 117..496 e-value: 1.8E-91 score: 307.5
IPR006886	DNA-directed RNA polymerase III subunit Rpc5	PANTHER	PTHR12069	DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5	coord: 112..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 522..547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..543

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G004950.2	CsGy4G004950.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005666	RNA polymerase III complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity